RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
HERPUD2-206ENST00000438224 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
HERPUD2-206ENST00000438224 COG3Q96JB2 828 aa11.88□□□□□ -0.51
HERPUD2-206ENST00000438224 CARD10Q9BWT7 1032 aa11.88□□□□□ -0.51
HERPUD2-206ENST00000438224 RREB1Q92766 1687 aa11.87□□□□□ -0.51
HERPUD2-206ENST00000438224 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
HERPUD2-206ENST00000438224 CSB-PGBD3P0DP91 1061 aa11.86□□□□□ -0.51
HERPUD2-206ENST00000438224 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
HERPUD2-206ENST00000438224 ANKRD24Q8TF21 1146 aa11.86□□□□□ -0.51
HERPUD2-206ENST00000438224 IP6K1Q92551 441 aa11.86□□□□□ -0.51
HERPUD2-206ENST00000438224 NUP188Q5SRE5 1749 aa11.86□□□□□ -0.51
HERPUD2-206ENST00000438224 CCDC7Q96M83 1385 aa11.85□□□□□ -0.51
HERPUD2-206ENST00000438224 HOXC9P31274 260 aa11.85□□□□□ -0.51
HERPUD2-206ENST00000438224 TNS2Q63HR2 1409 aa11.85□□□□□ -0.51
HERPUD2-206ENST00000438224 RTL1A6NKG5 1358 aa11.84□□□□□ -0.51
HERPUD2-206ENST00000438224 TRIM37O94972 964 aa11.84□□□□□ -0.51
HERPUD2-206ENST00000438224 PDE3BQ13370 1112 aa11.84□□□□□ -0.51
HERPUD2-206ENST00000438224 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
HERPUD2-206ENST00000438224 NLRP2Q9NX02 1062 aa11.84□□□□□ -0.51
HERPUD2-206ENST00000438224 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
HERPUD2-206ENST00000438224 OVOS2A0A0G2JMS6 1433 aa11.84□□□□□ -0.51
HERPUD2-206ENST00000438224 KIF7Q2M1P5 1343 aa11.84□□□□□ -0.51
HERPUD2-206ENST00000438224 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
HERPUD2-206ENST00000438224 DDB1Q16531 1140 aa11.83□□□□□ -0.52
HERPUD2-206ENST00000438224 PTF1AQ7RTS3 328 aa11.83□□□□□ -0.52
HERPUD2-206ENST00000438224 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
HERPUD2-206ENST00000438224 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
HERPUD2-206ENST00000438224 RGPD3A6NKT7 1758 aaPredicted RBP11.82□□□□□ -0.52
HERPUD2-206ENST00000438224 RGPD4Q7Z3J3 1758 aa11.82□□□□□ -0.52
HERPUD2-206ENST00000438224 NHSQ6T4R5 1651 aa11.82□□□□□ -0.52
HERPUD2-206ENST00000438224 PANK3Q9H999 370 aa11.82□□□□□ -0.52
HERPUD2-206ENST00000438224 EMILIN1Q9Y6C2 1016 aa11.82□□□□□ -0.52
HERPUD2-206ENST00000438224 MEGF6O75095 1541 aa11.81□□□□□ -0.52
HERPUD2-206ENST00000438224 BAG6P46379 1132 aa11.81□□□□□ -0.52
HERPUD2-206ENST00000438224 AMPHP49418 695 aa11.81□□□□□ -0.52
HERPUD2-206ENST00000438224 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
HERPUD2-206ENST00000438224 CDCA7Q9BWT1 371 aaPredicted RBP11.81□□□□□ -0.52
HERPUD2-206ENST00000438224 CGNL1Q0VF96 1302 aa11.81□□□□□ -0.52
HERPUD2-206ENST00000438224 BTAF1O14981 1849 aa11.81□□□□□ -0.52
HERPUD2-206ENST00000438224 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
HERPUD2-206ENST00000438224 BCL9O00512 1426 aa11.8□□□□□ -0.52
HERPUD2-206ENST00000438224 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
HERPUD2-206ENST00000438224 INSRP06213 1382 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 FLT4P35916 1363 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 IL2RBP14784 551 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 EZH2Q15910 746 aaKnown RBP11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 USHBP1Q8N6Y0 703 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 CAMKK2Q96RR4 588 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 SRCAPQ6ZRS2 3230 aa11.79□□□□□ -0.52
HERPUD2-206ENST00000438224 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
HERPUD2-206ENST00000438224 TMEM132AQ24JP5 1023 aa11.78□□□□□ -0.52
HERPUD2-206ENST00000438224 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
HERPUD2-206ENST00000438224 KIF24Q5T7B8 1368 aa11.78□□□□□ -0.52
HERPUD2-206ENST00000438224 EXOC5O00471 708 aa11.77□□□□□ -0.53
HERPUD2-206ENST00000438224 APBA3O96018 575 aa11.77□□□□□ -0.53
HERPUD2-206ENST00000438224 POLKQ9UBT6 870 aa11.77□□□□□ -0.53
HERPUD2-206ENST00000438224 WASHC2AQ641Q2 1341 aa11.77□□□□□ -0.53
HERPUD2-206ENST00000438224 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.53
HERPUD2-206ENST00000438224 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.53
HERPUD2-206ENST00000438224 TNNT2P45379 298 aaPredicted RBP11.76□□□□□ -0.53
HERPUD2-206ENST00000438224 ITGB4P16144 1822 aa11.76□□□□□ -0.53
HERPUD2-206ENST00000438224 KCNQ2O43526 872 aa11.75□□□□□ -0.53
HERPUD2-206ENST00000438224 MIER1Q8N108 512 aa11.75□□□□□ -0.53
HERPUD2-206ENST00000438224 NSD2O96028 1365 aa11.75□□□□□ -0.53
HERPUD2-206ENST00000438224 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
HERPUD2-206ENST00000438224 PER1O15534 1290 aaPredicted RBP11.74□□□□□ -0.53
HERPUD2-206ENST00000438224 BCL11BQ9C0K0 894 aaPredicted RBP11.74□□□□□ -0.53
HERPUD2-206ENST00000438224 PARD3Q8TEW0 1356 aa11.74□□□□□ -0.53
HERPUD2-206ENST00000438224 PPM1GO15355 546 aaPredicted RBP11.73□□□□□ -0.53
HERPUD2-206ENST00000438224 LY75O60449 1722 aa11.73□□□□□ -0.53
HERPUD2-206ENST00000438224 LRP5O75197 1615 aa11.73□□□□□ -0.53
HERPUD2-206ENST00000438224 ACSBG1Q96GR2 724 aa11.73□□□□□ -0.53
HERPUD2-206ENST00000438224 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
HERPUD2-206ENST00000438224 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
HERPUD2-206ENST00000438224 EYA1Q99502 592 aa11.72□□□□□ -0.53
HERPUD2-206ENST00000438224 TUBGCP6Q96RT7 1819 aa11.72□□□□□ -0.53
HERPUD2-206ENST00000438224 CASZ1Q86V15 1759 aa11.72□□□□□ -0.53
HERPUD2-206ENST00000438224 EIF4A2Q14240 407 aaKnown RBP11.71□□□□□ -0.53
HERPUD2-206ENST00000438224 R3HDM1Q15032 1099 aaKnown RBP11.71□□□□□ -0.53
HERPUD2-206ENST00000438224 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.53
HERPUD2-206ENST00000438224 KNSTRNQ9Y448 316 aa11.71□□□□□ -0.53
HERPUD2-206ENST00000438224 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.54
HERPUD2-206ENST00000438224 PLSCR1O15162 318 aa11.7□□□□□ -0.54
HERPUD2-206ENST00000438224 MORC1Q86VD1 984 aa11.7□□□□□ -0.54
HERPUD2-206ENST00000438224 ZCRB1Q8TBF4 217 aaKnown RBP11.7□□□□□ -0.54
HERPUD2-206ENST00000438224 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
HERPUD2-206ENST00000438224 RAPGEF4Q8WZA2 1011 aa11.69□□□□□ -0.54
HERPUD2-206ENST00000438224 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
HERPUD2-206ENST00000438224 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
HERPUD2-206ENST00000438224 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
HERPUD2-206ENST00000438224 CYP27B1O15528 508 aa11.68□□□□□ -0.54
HERPUD2-206ENST00000438224 TATP17735 454 aaPredicted RBP11.68□□□□□ -0.54
HERPUD2-206ENST00000438224 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
HERPUD2-206ENST00000438224 CC2D1BQ5T0F9 858 aaKnown RBP11.67□□□□□ -0.54
HERPUD2-206ENST00000438224 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms