RNA–Protein interactions for RNA: ENST00000438150.2

ZNF28-203, Transcript of zinc finger protein 28, humanhuman

TSL 2 BASIC

Gene ZNF28, Length 5,171 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-203ENST00000438150 SMC3Q9UQE7 1217 aa5.4□□□□□ -1.54
ZNF28-203ENST00000438150 NKTRP30414 1462 aaKnown RBP5.4□□□□□ -1.55
ZNF28-203ENST00000438150 PLIN1O60240 522 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 TPM4P67936 248 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 OTUD6BQ8N6M0 293 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 MADDQ8WXG6 1647 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 DISP1Q96F81 1524 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 MTUS2Q5JR59 1369 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 PPFIA3O75145 1194 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 RXRBP28702 533 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 MRE11P49959 708 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 MLECQ14165 292 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 ZKSCAN8Q15776 578 aaPredicted RBP5.4□□□□□ -1.55
ZNF28-203ENST00000438150 TSR1Q2NL82 804 aaKnown RBP5.4□□□□□ -1.55
ZNF28-203ENST00000438150 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.4□□□□□ -1.55
ZNF28-203ENST00000438150 USP6NLQ92738 828 aa5.4□□□□□ -1.55
ZNF28-203ENST00000438150 RBM33Q96EV2 1170 aaKnown RBP5.4□□□□□ -1.55
ZNF28-203ENST00000438150 DDX49Q9Y6V7 483 aaKnown RBP5.4□□□□□ -1.55
ZNF28-203ENST00000438150 CENPJQ9HC77 1338 aaPredicted RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 BIRC2Q13490 618 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 CCDC92Q53HC0 331 aaPredicted RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 MFSD4BQ5TF39 518 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 CCDC73Q6ZRK6 1079 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 NUTM1Q86Y26 1132 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 CCDC85AQ96PX6 553 aaPredicted RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 MAGEC2Q9UBF1 373 aaPredicted RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 BAG6P46379 1132 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 IQCGQ9H095 443 aaKnown RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 YY1AP1Q9H869 796 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 SPATS2LQ9NUQ6 558 aaKnown RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 USP25Q9UHP3 1055 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 A0A1B0GUA9 196 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 RABEP1Q15276 862 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 GEMIN8Q9NWZ8 242 aaKnown RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 CHCHD3Q9NX63 227 aaKnown RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 RNF17Q9BXT8 1623 aaKnown RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 SHANK2Q9UPX8 1470 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 GTF2E1P29083 439 aaPredicted RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 PRPHP41219 470 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 PSME1Q06323 249 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 SEPT7Q16181 437 aaKnown RBP5.39□□□□□ -1.55
ZNF28-203ENST00000438150 ZKSCAN2Q63HK3 967 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 CCDC82Q8N4S0 544 aa5.39□□□□□ -1.55
ZNF28-203ENST00000438150 UQCRHLA0A096LP55 91 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 UQCRHP07919 91 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 MCM6Q14566 821 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 CCDC65Q8IXS2 484 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 WHAMMQ8TF30 809 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 PNMA2Q9UL42 364 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 ATP10BO94823 1461 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 WASHC2AQ641Q2 1341 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 DYNC1I1O14576 645 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 NEXNQ0ZGT2 675 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 CC2D1AQ6P1N0 951 aaPredicted RBP5.38□□□□□ -1.55
ZNF28-203ENST00000438150 ZNF280CQ8ND82 737 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 ATRIPQ8WXE1 791 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 PARD3Q8TEW0 1356 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 TERF1P54274 439 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 KRBA2Q6ZNG9 492 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 MIER1Q8N108 512 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 KIF2CQ99661 725 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 CCDC94Q9BW85 323 aaPredicted RBP5.38□□□□□ -1.55
ZNF28-203ENST00000438150 A2MP01023 1474 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 WASHC2CQ9Y4E1 1318 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 IKQ13123 557 aaPredicted RBP5.38□□□□□ -1.55
ZNF28-203ENST00000438150 SEPT6Q14141 434 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 GET4Q7L5D6 327 aaPredicted RBP5.38□□□□□ -1.55
ZNF28-203ENST00000438150 MYO5CQ9NQX4 1742 aa5.38□□□□□ -1.55
ZNF28-203ENST00000438150 RSRC1Q96IZ7 334 aaKnown RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 TOMM22Q9NS69 142 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 IFT57Q9NWB7 429 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 MYO3AQ8NEV4 1616 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 KDM5CP41229 1560 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 PPM1FP49593 454 aaPredicted RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 PSMC1P62191 440 aaKnown RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 CCDC47Q96A33 483 aaKnown RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 FEZ1Q99689 392 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 UBA5Q9GZZ9 404 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 ATP7AQ04656 1500 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 ITSN2Q9NZM3 1697 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 SHTN1A0MZ66 631 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 PRPF40AO75400 957 aaKnown RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 PEX19P40855 299 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 MPNDQ8N594 471 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 CALR3Q96L12 384 aaKnown RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 A0A1B0GUL7 405 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 ESPNB1AK53 854 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 TRIM21P19474 475 aaKnown RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 RBM6P78332 1123 aaKnown RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 SKOR2Q2VWA4 1001 aaPredicted RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 TTC31Q49AM3 519 aaPredicted RBP5.37□□□□□ -1.55
ZNF28-203ENST00000438150 NUP133Q8WUM0 1156 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 RABEP2Q9H5N1 569 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 PRM3Q9NNZ6 103 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 IRAK4Q9NWZ3 460 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 VWDEQ8N2E2 1590 aa5.37□□□□□ -1.55
ZNF28-203ENST00000438150 VIMP08670 466 aaKnown RBP5.36□□□□□ -1.55
ZNF28-203ENST00000438150 CBX1P83916 185 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms