RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.45
SHPRH-206ENST00000438092 MYO6Q9UM54 1294 aa12.21□□□□□ -0.45
SHPRH-206ENST00000438092 GPTP24298 496 aa12.21□□□□□ -0.46
SHPRH-206ENST00000438092 PPFIBP1Q86W92 1011 aa12.21□□□□□ -0.46
SHPRH-206ENST00000438092 NGLY1Q96IV0 654 aa12.21□□□□□ -0.46
SHPRH-206ENST00000438092 STIM1Q13586 685 aa12.21□□□□□ -0.46
SHPRH-206ENST00000438092 LRRC9Q6ZRR7 1453 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 AKNAQ7Z591 1439 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 PDCP20941 246 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 ENOX2Q16206 610 aaKnown RBP12.2□□□□□ -0.46
SHPRH-206ENST00000438092 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 GNAT3A8MTJ3 354 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 H0YHG0 523 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 CCDC181Q5TID7 509 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 MKNK2Q9HBH9 465 aa12.2□□□□□ -0.46
SHPRH-206ENST00000438092 PNISRQ8TF01 805 aaKnown RBP12.19□□□□□ -0.46
SHPRH-206ENST00000438092 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
SHPRH-206ENST00000438092 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
SHPRH-206ENST00000438092 GUCY1B3Q02153 619 aa12.19□□□□□ -0.46
SHPRH-206ENST00000438092 UBA5Q9GZZ9 404 aa12.19□□□□□ -0.46
SHPRH-206ENST00000438092 BOLA2Q9H3K6 86 aa12.19□□□□□ -0.46
SHPRH-206ENST00000438092 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
SHPRH-206ENST00000438092 FOXO3O43524 673 aa12.19□□□□□ -0.46
SHPRH-206ENST00000438092 RBM10P98175 930 aaKnown RBP12.19□□□□□ -0.46
SHPRH-206ENST00000438092 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
SHPRH-206ENST00000438092 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
SHPRH-206ENST00000438092 CEBPAP49715 358 aaPredicted RBP12.19□□□□□ -0.46
SHPRH-206ENST00000438092 CASTP20810 708 aaKnown RBP12.18□□□□□ -0.46
SHPRH-206ENST00000438092 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
SHPRH-206ENST00000438092 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
SHPRH-206ENST00000438092 NESP48681 1621 aa12.18□□□□□ -0.46
SHPRH-206ENST00000438092 JARID2Q92833 1246 aaPredicted RBP12.18□□□□□ -0.46
SHPRH-206ENST00000438092 CAMK4Q16566 473 aa12.18□□□□□ -0.46
SHPRH-206ENST00000438092 JMYQ8N9B5 988 aa12.18□□□□□ -0.46
SHPRH-206ENST00000438092 TSPYL1Q9H0U9 437 aa12.18□□□□□ -0.46
SHPRH-206ENST00000438092 C9orf84Q5VXU9 1444 aa12.18□□□□□ -0.46
SHPRH-206ENST00000438092 CHD1LQ86WJ1 897 aa12.17□□□□□ -0.46
SHPRH-206ENST00000438092 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-206ENST00000438092 RABEP1Q15276 862 aa12.17□□□□□ -0.46
SHPRH-206ENST00000438092 RPGRQ92834 1020 aaKnown RBP12.17□□□□□ -0.46
SHPRH-206ENST00000438092 CAVIN4Q5BKX8 364 aa12.17□□□□□ -0.46
SHPRH-206ENST00000438092 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
SHPRH-206ENST00000438092 RANBP6O60518 1105 aaKnown RBP12.17□□□□□ -0.46
SHPRH-206ENST00000438092 LETM1O95202 739 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-206ENST00000438092 CT47B1P0C2W7 299 aaPredicted RBP12.16□□□□□ -0.46
SHPRH-206ENST00000438092 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
SHPRH-206ENST00000438092 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 CEP57L1Q8IYX8 460 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
SHPRH-206ENST00000438092 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 DUSP27Q5VZP5 1158 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
SHPRH-206ENST00000438092 SEC63Q9UGP8 760 aaKnown RBP12.16□□□□□ -0.46
SHPRH-206ENST00000438092 F6X3S4 739 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 CCDC144CPQ8IYA2 1237 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 C6orf229H3BNL8 230 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 NBPF8Q3BBV2 869 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 WDR70Q9NW82 654 aa12.16□□□□□ -0.46
SHPRH-206ENST00000438092 IMMTQ16891 758 aaKnown RBP12.15□□□□□ -0.46
SHPRH-206ENST00000438092 KLHL10Q6JEL2 608 aa12.15□□□□□ -0.46
SHPRH-206ENST00000438092 ZNF622Q969S3 477 aaKnown RBP eCLIP12.15□□□□□ -0.465e-7■□□□□ 11.3
SHPRH-206ENST00000438092 ERLIN2O94905 339 aa12.15□□□□□ -0.46
SHPRH-206ENST00000438092 FERMT3Q86UX7 667 aa12.15□□□□□ -0.46
SHPRH-206ENST00000438092 TMEM57Q8N5G2 664 aa12.15□□□□□ -0.46
SHPRH-206ENST00000438092 TRMT112Q9UI30 125 aaKnown RBP12.15□□□□□ -0.46
SHPRH-206ENST00000438092 VAT1LQ9HCJ6 419 aa12.15□□□□□ -0.46
SHPRH-206ENST00000438092 DNA2P51530 1060 aa12.15□□□□□ -0.46
SHPRH-206ENST00000438092 TTC16Q8NEE8 873 aa12.15□□□□□ -0.46
SHPRH-206ENST00000438092 KRT85P78386 507 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 TMEM87AQ8NBN3 555 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 KIF21BO75037 1637 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 CA8P35219 290 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 MCM2P49736 904 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
SHPRH-206ENST00000438092 NSD3Q9BZ95 1437 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 CCDC192P0DO97 292 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 PSMD1Q99460 953 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 TMX1Q9H3N1 280 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 EIF5P55010 431 aaKnown RBP12.14□□□□□ -0.47
SHPRH-206ENST00000438092 CCDC83Q8IWF9 413 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
SHPRH-206ENST00000438092 ERCC4Q92889 916 aaPredicted RBP12.14□□□□□ -0.47
SHPRH-206ENST00000438092 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 K7ELQ4 463 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-206ENST00000438092 IFIT1P09914 478 aaKnown RBP12.13□□□□□ -0.47
SHPRH-206ENST00000438092 TNNT1P13805 278 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 NME9Q86XW9 330 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 CCDC191Q8NCU4 936 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 MRE11P49959 708 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 FILIP1Q7Z7B0 1213 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 KIAA1328Q86T90 577 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms