RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 CC2D1BQ5T0F9 858 aaKnown RBP24.25■■□□□ 1.47
NCSTN-208ENST00000438008 PTF1AQ7RTS3 328 aa24.25■■□□□ 1.47
NCSTN-208ENST00000438008 DDX54Q8TDD1 881 aaKnown RBP24.25■■□□□ 1.47
NCSTN-208ENST00000438008 KCNQ2O43526 872 aa24.21■■□□□ 1.47
NCSTN-208ENST00000438008 IGSF1Q8N6C5 1336 aa24.2■■□□□ 1.46
NCSTN-208ENST00000438008 ACSBG1Q96GR2 724 aa24.2■■□□□ 1.46
NCSTN-208ENST00000438008 MTHFSP49914 203 aa24.18■■□□□ 1.46
NCSTN-208ENST00000438008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.18■■□□□ 1.46
NCSTN-208ENST00000438008 SHANK3Q9BYB0 1731 aa24.18■■□□□ 1.46
NCSTN-208ENST00000438008 NHSQ6T4R5 1651 aa24.18■■□□□ 1.46
NCSTN-208ENST00000438008 PLEKHG2Q9H7P9 1386 aa24.17■■□□□ 1.46
NCSTN-208ENST00000438008 PCDH11XQ9BZA7 1347 aa24.17■■□□□ 1.46
NCSTN-208ENST00000438008 PCDH11YQ9BZA8 1340 aa24.17■■□□□ 1.46
NCSTN-208ENST00000438008 IL13P35225 146 aa24.16■■□□□ 1.46
NCSTN-208ENST00000438008 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
NCSTN-208ENST00000438008 RGPD3A6NKT7 1758 aaPredicted RBP24.16■■□□□ 1.46
NCSTN-208ENST00000438008 RGPD4Q7Z3J3 1758 aa24.16■■□□□ 1.46
NCSTN-208ENST00000438008 SPG7Q9UQ90 795 aa24.15■■□□□ 1.46
NCSTN-208ENST00000438008 RREB1Q92766 1687 aa24.15■■□□□ 1.46
NCSTN-208ENST00000438008 CYP27B1O15528 508 aa24.14■■□□□ 1.45
NCSTN-208ENST00000438008 PROM2Q8N271 834 aa24.13■■□□□ 1.45
NCSTN-208ENST00000438008 PKD1L3Q7Z443 1732 aa24.12■■□□□ 1.45
NCSTN-208ENST00000438008 PRIM1P49642 420 aaKnown RBP24.11■■□□□ 1.45
NCSTN-208ENST00000438008 CNGB1Q14028 1251 aaPredicted RBP24.1■■□□□ 1.45
NCSTN-208ENST00000438008 NKX1-1Q15270 411 aaPredicted RBP24.1■■□□□ 1.45
NCSTN-208ENST00000438008 TXNRD1Q16881 649 aa24.1■■□□□ 1.45
NCSTN-208ENST00000438008 NBPF14Q5TI25 921 aa24.1■■□□□ 1.45
NCSTN-208ENST00000438008 NUP188Q5SRE5 1749 aa24.1■■□□□ 1.45
NCSTN-208ENST00000438008 KDRP35968 1356 aa24.09■■□□□ 1.45
NCSTN-208ENST00000438008 PSDA5PKW4 1024 aaPredicted RBP24.08■■□□□ 1.45
NCSTN-208ENST00000438008 SYTL4Q96C24 671 aaPredicted RBP24.08■■□□□ 1.45
NCSTN-208ENST00000438008 DIAPH1O60610 1272 aaKnown RBP24.07■■□□□ 1.44
NCSTN-208ENST00000438008 R3HDM1Q15032 1099 aaKnown RBP24.07■■□□□ 1.44
NCSTN-208ENST00000438008 SULT6B1Q6IMI4 303 aa24.07■■□□□ 1.44
NCSTN-208ENST00000438008 AEBP1Q8IUX7 1158 aa24.07■■□□□ 1.44
NCSTN-208ENST00000438008 BTAF1O14981 1849 aa24.06■■□□□ 1.44
NCSTN-208ENST00000438008 IFNL2Q8IZJ0 200 aa24.06■■□□□ 1.44
NCSTN-208ENST00000438008 DOT1LQ8TEK3 1739 aa24.05■■□□□ 1.44
NCSTN-208ENST00000438008 PHKG2P15735 406 aa24.05■■□□□ 1.44
NCSTN-208ENST00000438008 AMOTQ4VCS5 1084 aa24.05■■□□□ 1.44
NCSTN-208ENST00000438008 PLEKHO1Q53GL0 409 aaPredicted RBP24.05■■□□□ 1.44
NCSTN-208ENST00000438008 COL3A1P02461 1466 aaPredicted RBP24.04■■□□□ 1.44
NCSTN-208ENST00000438008 PPP2R1AP30153 589 aa24.03■■□□□ 1.44
NCSTN-208ENST00000438008 KAT6BQ8WYB5 2073 aa24.01■■□□□ 1.43
NCSTN-208ENST00000438008 SLC27A3Q5K4L6 730 aa24■■□□□ 1.43
NCSTN-208ENST00000438008 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
NCSTN-208ENST00000438008 CFAP53Q96M91 514 aa23.99■■□□□ 1.43
NCSTN-208ENST00000438008 HSP90AB1P08238 724 aaKnown RBP23.98■■□□□ 1.43
NCSTN-208ENST00000438008 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
NCSTN-208ENST00000438008 ZNF530Q6P9A1 599 aaPredicted RBP23.98■■□□□ 1.43
NCSTN-208ENST00000438008 MPRIPQ6WCQ1 1025 aa23.98■■□□□ 1.43
NCSTN-208ENST00000438008 LRRC4BQ9NT99 713 aa23.98■■□□□ 1.43
NCSTN-208ENST00000438008 HMOX1P09601 288 aa23.97■■□□□ 1.43
NCSTN-208ENST00000438008 TOGARAM1Q9Y4F4 1720 aa23.97■■□□□ 1.43
NCSTN-208ENST00000438008 PIGBQ92521 554 aa23.96■■□□□ 1.43
NCSTN-208ENST00000438008 DCAF5Q96JK2 942 aa23.96■■□□□ 1.43
NCSTN-208ENST00000438008 STK32BQ9NY57 414 aa23.96■■□□□ 1.43
NCSTN-208ENST00000438008 SLC15A2Q16348 729 aa23.95■■□□□ 1.42
NCSTN-208ENST00000438008 ERVV-2B6SEH9 535 aa23.94■■□□□ 1.42
NCSTN-208ENST00000438008 C1orf141Q5JVX7 400 aa23.94■■□□□ 1.42
NCSTN-208ENST00000438008 PAPPAQ13219 1627 aa23.93■■□□□ 1.42
NCSTN-208ENST00000438008 U2SURPO15042 1029 aaKnown RBP23.93■■□□□ 1.42
NCSTN-208ENST00000438008 SMARCC1Q92922 1105 aaPredicted RBP23.93■■□□□ 1.42
NCSTN-208ENST00000438008 TMOD3Q9NYL9 352 aa23.93■■□□□ 1.42
NCSTN-208ENST00000438008 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
NCSTN-208ENST00000438008 LY75O60449 1722 aa23.92■■□□□ 1.42
NCSTN-208ENST00000438008 CCNL1Q9UK58 526 aaPredicted RBP23.91■■□□□ 1.42
NCSTN-208ENST00000438008 KDM6AO15550 1401 aaPredicted RBP23.91■■□□□ 1.42
NCSTN-208ENST00000438008 ITGB4P16144 1822 aa23.91■■□□□ 1.42
NCSTN-208ENST00000438008 PALLDQ8WX93 1383 aa23.91■■□□□ 1.42
NCSTN-208ENST00000438008 RALBP1Q15311 655 aa23.9■■□□□ 1.42
NCSTN-208ENST00000438008 AKAP4Q5JQC9 854 aa23.9■■□□□ 1.42
NCSTN-208ENST00000438008 AKT1S1Q96B36 256 aa23.9■■□□□ 1.42
NCSTN-208ENST00000438008 LRP5O75197 1615 aa23.89■■□□□ 1.42
NCSTN-208ENST00000438008 HMGB2P26583 209 aaKnown RBP23.89■■□□□ 1.41
NCSTN-208ENST00000438008 KCNQ4P56696 695 aa23.88■■□□□ 1.41
NCSTN-208ENST00000438008 ZNF827Q17R98 1081 aa23.88■■□□□ 1.41
NCSTN-208ENST00000438008 MTHFSDQ2M296 383 aaKnown RBP23.88■■□□□ 1.41
NCSTN-208ENST00000438008 SRCAPQ6ZRS2 3230 aa23.87■■□□□ 1.41
NCSTN-208ENST00000438008 ATG3Q9NT62 314 aa23.86■■□□□ 1.41
NCSTN-208ENST00000438008 ASAP1Q9ULH1 1129 aa23.86■■□□□ 1.41
NCSTN-208ENST00000438008 CABP4P57796 275 aa23.85■■□□□ 1.41
NCSTN-208ENST00000438008 RSPH6AQ9H0K4 717 aa23.85■■□□□ 1.41
NCSTN-208ENST00000438008 PDGFDQ9GZP0 370 aaPredicted RBP23.84■■□□□ 1.41
NCSTN-208ENST00000438008 CASZ1Q86V15 1759 aa23.83■■□□□ 1.41
NCSTN-208ENST00000438008 FCHSD2O94868 740 aa23.83■■□□□ 1.41
NCSTN-208ENST00000438008 U2AF1L5P0DN76 240 aaPredicted RBP23.83■■□□□ 1.41
NCSTN-208ENST00000438008 U2AF1Q01081 240 aaKnown RBP eCLIP23.83■■□□□ 1.41
NCSTN-208ENST00000438008 GAS2L2Q8NHY3 880 aa23.83■■□□□ 1.41
NCSTN-208ENST00000438008 LOC102724428A0A0B4J2F2 783 aa23.82■■□□□ 1.4
NCSTN-208ENST00000438008 SIK1P57059 783 aa23.82■■□□□ 1.4
NCSTN-208ENST00000438008 SPON1Q9HCB6 807 aa23.82■■□□□ 1.4
NCSTN-208ENST00000438008 RNMTO43148 476 aaKnown RBP23.81■■□□□ 1.4
NCSTN-208ENST00000438008 PRKAR2BP31323 418 aa23.81■■□□□ 1.4
NCSTN-208ENST00000438008 NFATC2IPQ8NCF5 419 aa23.81■■□□□ 1.4
NCSTN-208ENST00000438008 LGR6Q9HBX8 967 aa23.81■■□□□ 1.4
NCSTN-208ENST00000438008 TFCP2L1Q9NZI6 479 aa23.8■■□□□ 1.4
NCSTN-208ENST00000438008 PHACTR3Q96KR7 559 aa23.79■■□□□ 1.4
NCSTN-208ENST00000438008 SLC52A2Q9HAB3 445 aa23.79■■□□□ 1.4
NCSTN-208ENST00000438008 PNPLA7Q6ZV29 1317 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms