RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 HTRA3P83110 453 aa18.11■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 COL23A1Q86Y22 540 aaPredicted RBP18.11■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 CD2APQ9Y5K6 639 aa18.08■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 IL2RBP14784 551 aa18.06■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 NLRP2Q9NX02 1062 aa18.06■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 TOMM70O94826 608 aa18.05■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 CACNB1Q02641 598 aaPredicted RBP18.05■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 KCNH5Q8NCM2 988 aa18.05■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 JMYQ8N9B5 988 aa18.04■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 PCNTO95613 3336 aa18.03■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 DDX54Q8TDD1 881 aaKnown RBP18.03■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 NFAT5O94916 1531 aa18.03■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 IGSF1Q8N6C5 1336 aa18.02■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 SYTL4Q96C24 671 aaPredicted RBP18.02■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 WDR90Q96KV7 1748 aa18.02■□□□□ 0.48
SMAD9-IT1-201ENST00000437983 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 SLC34A2O95436 690 aa18.01■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 ERBB3P21860 1342 aa18■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 MKRN4PQ13434 485 aaPredicted RBP18■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 NMRK2Q9NPI5 230 aa18■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 CCNL1Q9UK58 526 aaPredicted RBP18■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 LY75O60449 1722 aa17.99■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 NSD2O96028 1365 aa17.99■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
SMAD9-IT1-201ENST00000437983 CENPJQ9HC77 1338 aaPredicted RBP17.96■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 ANKRD36BQ8N2N9 1353 aa17.95■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 ANKRD24Q8TF21 1146 aa17.95■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 SMIM5Q71RC9 77 aa17.93■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 RBM46Q8TBY0 533 aaKnown RBP17.93■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 AMIGO3Q86WK7 504 aa17.92■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 CICQ96RK0 1608 aaPredicted RBP17.91■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 TTC21AQ8NDW8 1320 aa17.91■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 ZNF692Q9BU19 519 aaPredicted RBP17.9■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 FBXO3Q9UK99 471 aa17.9■□□□□ 0.46
SMAD9-IT1-201ENST00000437983 HSPA1AP0DMV8 641 aaKnown RBP17.88■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 HSPA1BP0DMV9 641 aaKnown RBP17.88■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 USP47Q96K76 1375 aa17.88■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 C5P01031 1676 aa17.87■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 FSTL1Q12841 308 aa17.86■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 C16orf71Q8IYS4 520 aaPredicted RBP17.86■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 LTV1Q96GA3 475 aaPredicted RBP17.86■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 USP54Q70EL1 1684 aa17.86■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 LTN1O94822 1766 aa17.86■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 PHF14O94880 888 aa17.85■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 NME9Q86XW9 330 aa17.85■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 KIAA1210Q9ULL0 1709 aa17.85■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 ARHGAP27Q6ZUM4 889 aa17.84■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 BCS1LQ9Y276 419 aa17.84■□□□□ 0.45
SMAD9-IT1-201ENST00000437983 USP31Q70CQ4 1352 aa17.82■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 TOGARAM1Q9Y4F4 1720 aa17.82■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.81■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 TAF1LQ8IZX4 1826 aa17.81■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 A0A0G2JLW4 131 aa17.8■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 C9orf131Q5VYM1 1079 aa17.8■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 AK7Q96M32 723 aa17.8■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 RRAGCQ9HB90 399 aa17.8■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 KCPQ6ZWJ8 1503 aa17.8■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 C4BP0C0L5 1744 aa17.78■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 MEGF6O75095 1541 aa17.78■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 IP6K1Q92551 441 aa17.78■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 POLA2Q14181 598 aa17.77■□□□□ 0.44
SMAD9-IT1-201ENST00000437983 UBR3Q6ZT12 1888 aa17.76■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 FAM208AQ9UK61 1670 aaKnown RBP17.76■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 FCHSD2O94868 740 aa17.75■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 MMP10P09238 476 aa17.75■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 SBNO2Q9Y2G9 1366 aa17.75■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 DPEP1P16444 411 aa17.74■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 MPRIPQ6WCQ1 1025 aa17.74■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 SMC1BQ8NDV3 1235 aa17.74■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 TGFB2P61812 414 aa17.73■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 RGPD2P0DJD1 1756 aa17.73■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 PLEKHG2Q9H7P9 1386 aa17.72■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 KIF13BQ9NQT8 1826 aa17.72■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 CD163L1Q9NR16 1453 aa17.71■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 FBLN1P23142 703 aa17.71■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 SSFA2P28290 1259 aa17.71■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 LINC00116Q8NCU8 138 aa17.71■□□□□ 0.43
SMAD9-IT1-201ENST00000437983 PCDH10Q9P2E7 1040 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms