RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 GOLGA6L22H0YM25 854 aa13.2□□□□□ -0.3
GABRA1-204ENST00000437025 G2E3Q7L622 706 aa13.2□□□□□ -0.3
GABRA1-204ENST00000437025 AMOTL2Q9Y2J4 779 aa13.2□□□□□ -0.3
GABRA1-204ENST00000437025 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
GABRA1-204ENST00000437025 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
GABRA1-204ENST00000437025 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
GABRA1-204ENST00000437025 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
GABRA1-204ENST00000437025 LTKP29376 864 aa13.19□□□□□ -0.3
GABRA1-204ENST00000437025 ARHGAP45Q92619 1136 aa13.19□□□□□ -0.3
GABRA1-204ENST00000437025 TNRQ92752 1358 aa13.18□□□□□ -0.3
GABRA1-204ENST00000437025 K7ELQ4 463 aaPredicted RBP13.18□□□□□ -0.3
GABRA1-204ENST00000437025 HMMRO75330 724 aa13.18□□□□□ -0.3
GABRA1-204ENST00000437025 SSFA2P28290 1259 aa13.18□□□□□ -0.3
GABRA1-204ENST00000437025 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
GABRA1-204ENST00000437025 NLRP1Q9C000 1473 aa13.17□□□□□ -0.3
GABRA1-204ENST00000437025 GSPT1P15170 499 aaKnown RBP13.17□□□□□ -0.3
GABRA1-204ENST00000437025 PLEKHM2Q8IWE5 1019 aa13.17□□□□□ -0.3
GABRA1-204ENST00000437025 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
GABRA1-204ENST00000437025 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
GABRA1-204ENST00000437025 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
GABRA1-204ENST00000437025 ABCC4O15439 1325 aa13.16□□□□□ -0.3
GABRA1-204ENST00000437025 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
GABRA1-204ENST00000437025 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
GABRA1-204ENST00000437025 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
GABRA1-204ENST00000437025 TMEM131LA2VDJ0 1609 aa13.16□□□□□ -0.3
GABRA1-204ENST00000437025 ZNF853P0CG23 659 aa13.16□□□□□ -0.3
GABRA1-204ENST00000437025 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
GABRA1-204ENST00000437025 MSH6P52701 1360 aa13.16□□□□□ -0.3
GABRA1-204ENST00000437025 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.3
GABRA1-204ENST00000437025 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
GABRA1-204ENST00000437025 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.3
GABRA1-204ENST00000437025 SDSP20132 328 aa13.15□□□□□ -0.3
GABRA1-204ENST00000437025 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
GABRA1-204ENST00000437025 CEP85Q6P2H3 762 aa13.15□□□□□ -0.3
GABRA1-204ENST00000437025 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
GABRA1-204ENST00000437025 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
GABRA1-204ENST00000437025 MAP4K4O95819 1239 aaPredicted RBP13.14□□□□□ -0.31
GABRA1-204ENST00000437025 XPCQ01831 940 aaPredicted RBP13.14□□□□□ -0.31
GABRA1-204ENST00000437025 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
GABRA1-204ENST00000437025 TTC22Q5TAA0 569 aa13.14□□□□□ -0.31
GABRA1-204ENST00000437025 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
GABRA1-204ENST00000437025 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
GABRA1-204ENST00000437025 ADGRB2O60241 1585 aa13.14□□□□□ -0.31
GABRA1-204ENST00000437025 ATP7BP35670 1465 aa13.14□□□□□ -0.31
GABRA1-204ENST00000437025 ANKRD44Q8N8A2 993 aa13.14□□□□□ -0.31
GABRA1-204ENST00000437025 DCTPP1Q9H773 170 aa13.14□□□□□ -0.31
GABRA1-204ENST00000437025 CPS1P31327 1500 aa13.14□□□□□ -0.31
GABRA1-204ENST00000437025 EYA1Q99502 592 aa13.13□□□□□ -0.31
GABRA1-204ENST00000437025 CHL1O00533 1208 aa13.13□□□□□ -0.31
GABRA1-204ENST00000437025 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
GABRA1-204ENST00000437025 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
GABRA1-204ENST00000437025 ANP32BQ92688 251 aaKnown RBP13.13□□□□□ -0.31
GABRA1-204ENST00000437025 ANXA1P04083 346 aa13.12□□□□□ -0.31
GABRA1-204ENST00000437025 ST18O60284 1047 aa13.12□□□□□ -0.31
GABRA1-204ENST00000437025 GNAI2P04899 355 aa13.12□□□□□ -0.31
GABRA1-204ENST00000437025 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
GABRA1-204ENST00000437025 NAP1L2Q9ULW6 460 aaPredicted RBP13.12□□□□□ -0.31
GABRA1-204ENST00000437025 MED14O60244 1454 aa13.11□□□□□ -0.31
GABRA1-204ENST00000437025 NEK4P51957 841 aa13.11□□□□□ -0.31
GABRA1-204ENST00000437025 HDGFL1Q5TGJ6 251 aa13.11□□□□□ -0.31
GABRA1-204ENST00000437025 CLTCQ00610 1675 aaKnown RBP13.11□□□□□ -0.31
GABRA1-204ENST00000437025 REC8O95072 547 aa13.1□□□□□ -0.31
GABRA1-204ENST00000437025 GRPEL1Q9HAV7 217 aa13.1□□□□□ -0.31
GABRA1-204ENST00000437025 TMEM2Q9UHN6 1383 aa13.1□□□□□ -0.31
GABRA1-204ENST00000437025 FLIIQ13045 1269 aa13.1□□□□□ -0.31
GABRA1-204ENST00000437025 RABEP1Q15276 862 aa13.1□□□□□ -0.31
GABRA1-204ENST00000437025 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
GABRA1-204ENST00000437025 CPSF1Q10570 1443 aaKnown RBP13.1□□□□□ -0.31
GABRA1-204ENST00000437025 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
GABRA1-204ENST00000437025 MAP2P11137 1827 aaKnown RBP13.1□□□□□ -0.31
GABRA1-204ENST00000437025 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
GABRA1-204ENST00000437025 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
GABRA1-204ENST00000437025 SNX21Q969T3 373 aa13.09□□□□□ -0.31
GABRA1-204ENST00000437025 CCDC30Q5VVM6 783 aa13.09□□□□□ -0.31
GABRA1-204ENST00000437025 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
GABRA1-204ENST00000437025 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
GABRA1-204ENST00000437025 UPF3BQ9BZI7 483 aaKnown RBP13.09□□□□□ -0.31
GABRA1-204ENST00000437025 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
GABRA1-204ENST00000437025 GNAT3A8MTJ3 354 aa13.08□□□□□ -0.31
GABRA1-204ENST00000437025 SURF6O75683 361 aaKnown RBP13.08□□□□□ -0.31
GABRA1-204ENST00000437025 MRE11P49959 708 aa13.08□□□□□ -0.31
GABRA1-204ENST00000437025 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.31
GABRA1-204ENST00000437025 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.31
GABRA1-204ENST00000437025 PTCH1Q13635 1447 aa13.08□□□□□ -0.31
GABRA1-204ENST00000437025 AATKQ6ZMQ8 1374 aa13.08□□□□□ -0.31
GABRA1-204ENST00000437025 ZGPATQ8N5A5 531 aaKnown RBP13.08□□□□□ -0.31
GABRA1-204ENST00000437025 KIF2CQ99661 725 aa13.08□□□□□ -0.31
GABRA1-204ENST00000437025 RRAGDQ9NQL2 400 aaPredicted RBP13.08□□□□□ -0.32
GABRA1-204ENST00000437025 ERC2O15083 957 aa13.08□□□□□ -0.32
GABRA1-204ENST00000437025 FAM43AQ8N2R8 423 aa13.08□□□□□ -0.32
GABRA1-204ENST00000437025 PTPRCP08575 1304 aa13.08□□□□□ -0.32
GABRA1-204ENST00000437025 KCNA6P17658 529 aa13.08□□□□□ -0.32
GABRA1-204ENST00000437025 PKP1Q13835 747 aa13.08□□□□□ -0.32
GABRA1-204ENST00000437025 LRRCC1Q9C099 1032 aa13.08□□□□□ -0.32
GABRA1-204ENST00000437025 TEFQ10587 303 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 PRPF40AO75400 957 aaKnown RBP13.07□□□□□ -0.32
GABRA1-204ENST00000437025 PSME1Q06323 249 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 ESCO1Q5FWF5 840 aa13.07□□□□□ -0.32
GABRA1-204ENST00000437025 BBXQ8WY36 941 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms