RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 RAD51AP2Q09MP3 1159 aa9.71□□□□□ -0.85
GAPVD1-209ENST00000436712 DDX41Q9UJV9 622 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-209ENST00000436712 BRD4O60885 1362 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-209ENST00000436712 KIF1CO43896 1103 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-209ENST00000436712 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.86
GAPVD1-209ENST00000436712 MORC2Q9Y6X9 1032 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-209ENST00000436712 LAMC1P11047 1609 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 SCAF11Q99590 1463 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 TTC36A6NLP5 189 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 C14orf93Q9H972 538 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 KIAA1210Q9ULL0 1709 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 ADAMTSL3P82987 1691 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 MYO3AQ8NEV4 1616 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 DDIT3P35638 169 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 NBPF9Q3BBW0 867 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 PSMD1Q99460 953 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 CTNNA3Q9UI47 895 aa9.7□□□□□ -0.86
GAPVD1-209ENST00000436712 ASXL1Q8IXJ9 1541 aa9.69□□□□□ -0.86
GAPVD1-209ENST00000436712 KLHL40Q2TBA0 621 aa9.69□□□□□ -0.86
GAPVD1-209ENST00000436712 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
GAPVD1-209ENST00000436712 TNPO1Q92973 898 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-209ENST00000436712 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-209ENST00000436712 NCOA3Q9Y6Q9 1424 aa9.69□□□□□ -0.86
GAPVD1-209ENST00000436712 PARD3Q8TEW0 1356 aa9.69□□□□□ -0.86
GAPVD1-209ENST00000436712 MAPK8IP3Q9UPT6 1336 aa9.69□□□□□ -0.86
GAPVD1-209ENST00000436712 ERICH4A6NGS2 130 aa9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 FAM177BA6PVY3 158 aa9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 CTIFO43310 598 aaKnown RBP9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 TRERF1Q96PN7 1200 aa9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 ADGRB1O14514 1584 aa9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 LTKP29376 864 aa9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 PIBF1Q8WXW3 757 aa9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 SGSM3Q96HU1 749 aa9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
GAPVD1-209ENST00000436712 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 HNRNPH2P55795 449 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 MPNDQ8N594 471 aa9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 MNS1Q8NEH6 495 aa9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 CDCA7LQ96GN5 454 aa9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 ALKQ9UM73 1620 aa9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 NBPF10Q6P3W6 841 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 MED4Q9NPJ6 270 aa9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 EIF3AQ14152 1382 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 TMEM2Q9UHN6 1383 aa9.67□□□□□ -0.86
GAPVD1-209ENST00000436712 TDO2P48775 406 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 TMF1P82094 1093 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 FKBP5Q13451 457 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 SYCP1Q15431 976 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 TXNDC2Q86VQ3 553 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 KRT222Q8N1A0 295 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 GPATCH11Q8N954 259 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 DIAPH3Q9NSV4 1193 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 PTPRMP28827 1452 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 ZNF853P0CG23 659 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 CASQ1P31415 396 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 NOLC1Q14978 699 aaKnown RBP eCLIP9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 RAB3GAP1Q15042 981 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 RBSNQ9H1K0 784 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 NPC1L1Q9UHC9 1359 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 QRICH2Q9H0J4 1663 aa9.66□□□□□ -0.86
GAPVD1-209ENST00000436712 TMX1Q9H3N1 280 aa9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 ARHGEF28Q8N1W1 1705 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 NRXN3Q9Y4C0 1643 aa9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 CEP170BQ9Y4F5 1589 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 SETBP1Q9Y6X0 1596 aa9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 GOLGA6L22H0YM25 854 aa9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 CYP2C19P33261 490 aa9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 SSR1P43307 286 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 BSDC1Q9NW68 430 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.65□□□□□ -0.86
GAPVD1-209ENST00000436712 MINK1Q8N4C8 1332 aaPredicted RBP9.65□□□□□ -0.87
GAPVD1-209ENST00000436712 METP08581 1390 aa9.64□□□□□ -0.87
GAPVD1-209ENST00000436712 GOLGA6L6A8MZA4 724 aa9.64□□□□□ -0.87
GAPVD1-209ENST00000436712 SPTLC3Q9NUV7 552 aa9.64□□□□□ -0.87
GAPVD1-209ENST00000436712 CCDC189A1A4V9 331 aa9.64□□□□□ -0.87
GAPVD1-209ENST00000436712 REC8O95072 547 aa9.64□□□□□ -0.87
GAPVD1-209ENST00000436712 WAPLQ7Z5K2 1190 aa9.64□□□□□ -0.87
GAPVD1-209ENST00000436712 PUS7Q96PZ0 661 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-209ENST00000436712 PRAM1Q96QH2 718 aa9.64□□□□□ -0.87
GAPVD1-209ENST00000436712 CHAF1AQ13111 956 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 ZKSCAN8Q15776 578 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 CXorf56Q9H5V9 222 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 YTHDC2Q9H6S0 1430 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 TERF2IPQ9NYB0 399 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 SUFUQ9UMX1 484 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 DDX49Q9Y6V7 483 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 SETD1AO15047 1707 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 MUM1L1Q5H9M0 696 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 NBPF6Q5VWK0 638 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 NBPF5PQ86XG9 351 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 HSCBQ8IWL3 235 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 OTUD6BQ8N6M0 293 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 KIF18AQ8NI77 898 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 NBPF4Q96M43 638 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 EID1Q9Y6B2 187 aa9.63□□□□□ -0.87
GAPVD1-209ENST00000436712 RIOK3O14730 519 aaKnown RBP9.62□□□□□ -0.87
GAPVD1-209ENST00000436712 CLEC17AQ6ZS10 378 aa9.62□□□□□ -0.87
GAPVD1-209ENST00000436712 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms