RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 BCL9LQ86UU0 1499 aa12.77□□□□□ -0.37
NIF3L1-208ENST00000436412 GJD4Q96KN9 370 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-208ENST00000436412 RPGRIP1LQ68CZ1 1315 aa12.76□□□□□ -0.37
NIF3L1-208ENST00000436412 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
NIF3L1-208ENST00000436412 KIF1BO60333 1816 aa12.75□□□□□ -0.37
NIF3L1-208ENST00000436412 MLLT3P42568 568 aaPredicted RBP12.75□□□□□ -0.37
NIF3L1-208ENST00000436412 LRPPRCP42704 1394 aaKnown RBP12.75□□□□□ -0.37
NIF3L1-208ENST00000436412 PRSS12P56730 875 aa12.75□□□□□ -0.37
NIF3L1-208ENST00000436412 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
NIF3L1-208ENST00000436412 CLTCL1P53675 1640 aa12.74□□□□□ -0.37
NIF3L1-208ENST00000436412 BCAMP50895 628 aa12.74□□□□□ -0.37
NIF3L1-208ENST00000436412 ESCO1Q5FWF5 840 aa12.74□□□□□ -0.37
NIF3L1-208ENST00000436412 ANKK1Q8NFD2 765 aa12.74□□□□□ -0.37
NIF3L1-208ENST00000436412 BLMP54132 1417 aaPredicted RBP12.73□□□□□ -0.37
NIF3L1-208ENST00000436412 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
NIF3L1-208ENST00000436412 ITGAEP38570 1179 aa12.73□□□□□ -0.37
NIF3L1-208ENST00000436412 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
NIF3L1-208ENST00000436412 NPDC1Q9NQX5 325 aaPredicted RBP12.73□□□□□ -0.37
NIF3L1-208ENST00000436412 MARF1Q9Y4F3 1742 aaKnown RBP12.72□□□□□ -0.37
NIF3L1-208ENST00000436412 UNC5CLQ8IV45 518 aa12.72□□□□□ -0.37
NIF3L1-208ENST00000436412 PXDNQ92626 1479 aa12.72□□□□□ -0.37
NIF3L1-208ENST00000436412 FOXO3O43524 673 aa12.71□□□□□ -0.37
NIF3L1-208ENST00000436412 PACS2Q86VP3 889 aa12.71□□□□□ -0.37
NIF3L1-208ENST00000436412 CDC42BPGQ6DT37 1551 aa12.71□□□□□ -0.37
NIF3L1-208ENST00000436412 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
NIF3L1-208ENST00000436412 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-208ENST00000436412 SLIT2O94813 1529 aa12.69□□□□□ -0.38
NIF3L1-208ENST00000436412 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
NIF3L1-208ENST00000436412 SMAPO00193 183 aa12.68□□□□□ -0.38
NIF3L1-208ENST00000436412 TTC13Q8NBP0 860 aa12.68□□□□□ -0.38
NIF3L1-208ENST00000436412 SPATA31A3Q5VYP0 1347 aa12.67□□□□□ -0.38
NIF3L1-208ENST00000436412 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-208ENST00000436412 GLI3P10071 1580 aa12.66□□□□□ -0.38
NIF3L1-208ENST00000436412 NAIPQ13075 1403 aa12.66□□□□□ -0.38
NIF3L1-208ENST00000436412 RBM27Q9P2N5 1060 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-208ENST00000436412 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.38
NIF3L1-208ENST00000436412 TECPR2O15040 1411 aa12.65□□□□□ -0.38
NIF3L1-208ENST00000436412 VPS72Q15906 364 aa12.65□□□□□ -0.38
NIF3L1-208ENST00000436412 IFFO2Q5TF58 517 aa12.65□□□□□ -0.38
NIF3L1-208ENST00000436412 DEFB132Q7Z7B7 95 aa12.65□□□□□ -0.38
NIF3L1-208ENST00000436412 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.38
NIF3L1-208ENST00000436412 TATDN2Q93075 761 aa12.65□□□□□ -0.38
NIF3L1-208ENST00000436412 WBP1LQ9NX94 342 aa12.65□□□□□ -0.38
NIF3L1-208ENST00000436412 PPLO60437 1756 aa12.64□□□□□ -0.39
NIF3L1-208ENST00000436412 LRP5O75197 1615 aa12.64□□□□□ -0.39
NIF3L1-208ENST00000436412 ABCC11Q96J66 1382 aa12.64□□□□□ -0.39
NIF3L1-208ENST00000436412 BRWD3Q6RI45 1802 aa12.63□□□□□ -0.39
NIF3L1-208ENST00000436412 PSME1Q06323 249 aa12.63□□□□□ -0.39
NIF3L1-208ENST00000436412 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
NIF3L1-208ENST00000436412 KRT27Q7Z3Y8 459 aa12.63□□□□□ -0.39
NIF3L1-208ENST00000436412 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
NIF3L1-208ENST00000436412 KIF1AQ12756 1690 aa12.62□□□□□ -0.39
NIF3L1-208ENST00000436412 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-208ENST00000436412 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
NIF3L1-208ENST00000436412 WAPLQ7Z5K2 1190 aa12.62□□□□□ -0.39
NIF3L1-208ENST00000436412 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-208ENST00000436412 STK26Q9P289 416 aa12.62□□□□□ -0.39
NIF3L1-208ENST00000436412 NUTM2FA1L443 756 aa12.61□□□□□ -0.39
NIF3L1-208ENST00000436412 SEMA3EO15041 775 aa12.61□□□□□ -0.39
NIF3L1-208ENST00000436412 BAG6P46379 1132 aa12.61□□□□□ -0.39
NIF3L1-208ENST00000436412 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
NIF3L1-208ENST00000436412 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
NIF3L1-208ENST00000436412 PNMA3Q9UL41 463 aa12.61□□□□□ -0.39
NIF3L1-208ENST00000436412 RRBP1Q9P2E9 1410 aaKnown RBP12.61□□□□□ -0.39
NIF3L1-208ENST00000436412 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
NIF3L1-208ENST00000436412 NBPF26B4DH59 902 aa12.6□□□□□ -0.39
NIF3L1-208ENST00000436412 NUDT18Q6ZVK8 323 aa12.6□□□□□ -0.39
NIF3L1-208ENST00000436412 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
NIF3L1-208ENST00000436412 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-208ENST00000436412 TNS3Q68CZ2 1445 aa12.6□□□□□ -0.39
NIF3L1-208ENST00000436412 ADGRF5Q8IZF2 1346 aa12.6□□□□□ -0.39
NIF3L1-208ENST00000436412 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
NIF3L1-208ENST00000436412 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
NIF3L1-208ENST00000436412 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
NIF3L1-208ENST00000436412 ITGBL1O95965 494 aaPredicted RBP12.59□□□□□ -0.39
NIF3L1-208ENST00000436412 HRCP23327 699 aa12.59□□□□□ -0.39
NIF3L1-208ENST00000436412 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
NIF3L1-208ENST00000436412 TSR3Q9UJK0 312 aaKnown RBP12.59□□□□□ -0.39
NIF3L1-208ENST00000436412 FMN2Q9NZ56 1722 aa12.59□□□□□ -0.39
NIF3L1-208ENST00000436412 NYAP1Q6ZVC0 841 aa12.58□□□□□ -0.4
NIF3L1-208ENST00000436412 KNDC1Q76NI1 1749 aa12.57□□□□□ -0.4
NIF3L1-208ENST00000436412 PTGDRQ13258 359 aa12.57□□□□□ -0.4
NIF3L1-208ENST00000436412 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
NIF3L1-208ENST00000436412 YTHDC2Q9H6S0 1430 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-208ENST00000436412 TMEM132EQ6IEE7 984 aa12.56□□□□□ -0.4
NIF3L1-208ENST00000436412 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
NIF3L1-208ENST00000436412 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
NIF3L1-208ENST00000436412 A0A0G2JS52 829 aa12.55□□□□□ -0.4
NIF3L1-208ENST00000436412 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
NIF3L1-208ENST00000436412 MYT1Q01538 1121 aa12.55□□□□□ -0.4
NIF3L1-208ENST00000436412 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
NIF3L1-208ENST00000436412 PLCH1Q4KWH8 1693 aa12.54□□□□□ -0.4
NIF3L1-208ENST00000436412 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
NIF3L1-208ENST00000436412 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
NIF3L1-208ENST00000436412 NRXN1Q9ULB1 1477 aa12.54□□□□□ -0.4
NIF3L1-208ENST00000436412 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
NIF3L1-208ENST00000436412 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-208ENST00000436412 EYA1Q99502 592 aa12.53□□□□□ -0.4
NIF3L1-208ENST00000436412 DISP2A7MBM2 1401 aa12.53□□□□□ -0.4
NIF3L1-208ENST00000436412 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms