RNA–Protein interactions for RNA: ENST00000435617.1

LINC00444-201, long intergenic non-protein coding RNA 444, humanhuman

TSL 5 BASIC

Gene LINC00444, Length 215 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00444-201ENST00000435617 CABP1Q9NZU7 370 aa12.03□□□□□ -0.48
LINC00444-201ENST00000435617 ABCC6O95255 1503 aa12.02□□□□□ -0.48
LINC00444-201ENST00000435617 DCAF11Q8TEB1 546 aa12.02□□□□□ -0.49
LINC00444-201ENST00000435617 KCNH5Q8NCM2 988 aa12.01□□□□□ -0.49
LINC00444-201ENST00000435617 ARHGAP27Q6ZUM4 889 aa12□□□□□ -0.49
LINC00444-201ENST00000435617 TRPM1Q7Z4N2 1603 aa12□□□□□ -0.49
LINC00444-201ENST00000435617 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
LINC00444-201ENST00000435617 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
LINC00444-201ENST00000435617 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
LINC00444-201ENST00000435617 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
LINC00444-201ENST00000435617 ERBB3P21860 1342 aa11.96□□□□□ -0.49
LINC00444-201ENST00000435617 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.49
LINC00444-201ENST00000435617 FLAD1Q8NFF5 587 aa11.96□□□□□ -0.49
LINC00444-201ENST00000435617 ANKRD24Q8TF21 1146 aa11.96□□□□□ -0.49
LINC00444-201ENST00000435617 PIK3C2AO00443 1686 aa11.96□□□□□ -0.5
LINC00444-201ENST00000435617 NSD2O96028 1365 aa11.95□□□□□ -0.5
LINC00444-201ENST00000435617 ANKRD36BQ8N2N9 1353 aa11.95□□□□□ -0.5
LINC00444-201ENST00000435617 TTC21BQ7Z4L5 1316 aa11.95□□□□□ -0.5
LINC00444-201ENST00000435617 PHF14O94880 888 aa11.95□□□□□ -0.5
LINC00444-201ENST00000435617 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
LINC00444-201ENST00000435617 A0A0G2JLW4 131 aa11.94□□□□□ -0.5
LINC00444-201ENST00000435617 SMC1BQ8NDV3 1235 aa11.94□□□□□ -0.5
LINC00444-201ENST00000435617 USP47Q96K76 1375 aa11.93□□□□□ -0.5
LINC00444-201ENST00000435617 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
LINC00444-201ENST00000435617 KDM2BQ8NHM5 1336 aa11.92□□□□□ -0.5
LINC00444-201ENST00000435617 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
LINC00444-201ENST00000435617 LY75O60449 1722 aa11.92□□□□□ -0.5
LINC00444-201ENST00000435617 NFAT5O94916 1531 aa11.91□□□□□ -0.5
LINC00444-201ENST00000435617 FOXN1O15353 648 aa11.91□□□□□ -0.5
LINC00444-201ENST00000435617 FCHSD2O94868 740 aa11.91□□□□□ -0.5
LINC00444-201ENST00000435617 AK7Q96M32 723 aa11.91□□□□□ -0.5
LINC00444-201ENST00000435617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
LINC00444-201ENST00000435617 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
LINC00444-201ENST00000435617 LTV1Q96GA3 475 aaPredicted RBP11.9□□□□□ -0.5
LINC00444-201ENST00000435617 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
LINC00444-201ENST00000435617 NBPF1Q3BBV0 1214 aa11.89□□□□□ -0.51
LINC00444-201ENST00000435617 ZCRB1Q8TBF4 217 aaKnown RBP11.89□□□□□ -0.51
LINC00444-201ENST00000435617 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
LINC00444-201ENST00000435617 RNF181Q9P0P0 153 aa11.89□□□□□ -0.51
LINC00444-201ENST00000435617 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
LINC00444-201ENST00000435617 MMP10P09238 476 aa11.88□□□□□ -0.51
LINC00444-201ENST00000435617 DPEP1P16444 411 aa11.88□□□□□ -0.51
LINC00444-201ENST00000435617 TGFB2P61812 414 aa11.88□□□□□ -0.51
LINC00444-201ENST00000435617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00444-201ENST00000435617 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
LINC00444-201ENST00000435617 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
LINC00444-201ENST00000435617 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
LINC00444-201ENST00000435617 TTC21AQ8NDW8 1320 aa11.87□□□□□ -0.51
LINC00444-201ENST00000435617 DOT1LQ8TEK3 1739 aa11.87□□□□□ -0.51
LINC00444-201ENST00000435617 PRDM10Q9NQV6 1147 aa11.87□□□□□ -0.51
LINC00444-201ENST00000435617 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
LINC00444-201ENST00000435617 ABHD8Q96I13 439 aa11.86□□□□□ -0.51
LINC00444-201ENST00000435617 QRICH2Q9H0J4 1663 aa11.85□□□□□ -0.51
LINC00444-201ENST00000435617 PALLDQ8WX93 1383 aa11.85□□□□□ -0.51
LINC00444-201ENST00000435617 MPRIPQ6WCQ1 1025 aa11.85□□□□□ -0.51
LINC00444-201ENST00000435617 C10orf71Q711Q0 1435 aa11.85□□□□□ -0.51
LINC00444-201ENST00000435617 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
LINC00444-201ENST00000435617 C5P01031 1676 aa11.84□□□□□ -0.51
LINC00444-201ENST00000435617 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
LINC00444-201ENST00000435617 HMGB2P26583 209 aaKnown RBP11.84□□□□□ -0.51
LINC00444-201ENST00000435617 NME9Q86XW9 330 aa11.84□□□□□ -0.51
LINC00444-201ENST00000435617 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.52
LINC00444-201ENST00000435617 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
LINC00444-201ENST00000435617 SSFA2P28290 1259 aa11.83□□□□□ -0.52
LINC00444-201ENST00000435617 CTCFP49711 727 aaPredicted RBP11.83□□□□□ -0.52
LINC00444-201ENST00000435617 LBX1P52954 281 aa11.83□□□□□ -0.52
LINC00444-201ENST00000435617 TNRC18O15417 2968 aaPredicted RBP11.83□□□□□ -0.52
LINC00444-201ENST00000435617 CCDC85CA6NKD9 419 aa11.82□□□□□ -0.52
LINC00444-201ENST00000435617 KCNA3P22001 575 aa11.82□□□□□ -0.52
LINC00444-201ENST00000435617 IP6K1Q92551 441 aa11.82□□□□□ -0.52
LINC00444-201ENST00000435617 AIDAQ96BJ3 306 aa11.82□□□□□ -0.52
LINC00444-201ENST00000435617 C4BP0C0L5 1744 aa11.81□□□□□ -0.52
LINC00444-201ENST00000435617 GNPATO15228 680 aa11.81□□□□□ -0.52
LINC00444-201ENST00000435617 LINC00116Q8NCU8 138 aa11.81□□□□□ -0.52
LINC00444-201ENST00000435617 EVC2Q86UK5 1308 aa11.81□□□□□ -0.52
LINC00444-201ENST00000435617 PDE4DIPQ5VU43 2346 aa11.81□□□□□ -0.52
LINC00444-201ENST00000435617 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
LINC00444-201ENST00000435617 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
LINC00444-201ENST00000435617 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
LINC00444-201ENST00000435617 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
LINC00444-201ENST00000435617 CCDC87Q9NVE4 849 aa11.8□□□□□ -0.52
LINC00444-201ENST00000435617 PIM2Q9P1W9 311 aa11.8□□□□□ -0.52
LINC00444-201ENST00000435617 TAF1LQ8IZX4 1826 aa11.8□□□□□ -0.52
LINC00444-201ENST00000435617 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
LINC00444-201ENST00000435617 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
LINC00444-201ENST00000435617 TMF1P82094 1093 aa11.79□□□□□ -0.52
LINC00444-201ENST00000435617 SMARCC1Q92922 1105 aaPredicted RBP11.79□□□□□ -0.52
LINC00444-201ENST00000435617 MEGF6O75095 1541 aa11.79□□□□□ -0.52
LINC00444-201ENST00000435617 UBR3Q6ZT12 1888 aa11.78□□□□□ -0.52
LINC00444-201ENST00000435617 NSD3Q9BZ95 1437 aa11.78□□□□□ -0.52
LINC00444-201ENST00000435617 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
LINC00444-201ENST00000435617 PKD1L3Q7Z443 1732 aa11.78□□□□□ -0.52
LINC00444-201ENST00000435617 LTN1O94822 1766 aa11.78□□□□□ -0.52
LINC00444-201ENST00000435617 GLTPD2A6NH11 291 aa11.78□□□□□ -0.52
LINC00444-201ENST00000435617 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
LINC00444-201ENST00000435617 RGS19P49795 217 aa11.78□□□□□ -0.52
LINC00444-201ENST00000435617 RASSF7Q02833 373 aa11.78□□□□□ -0.52
LINC00444-201ENST00000435617 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
LINC00444-201ENST00000435617 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.52
LINC00444-201ENST00000435617 NLGN1Q8N2Q7 840 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms