RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SMARCC1Q92922 1105 aaPredicted RBP18.7■□□□□ 0.58
NEDD4-202ENST00000435532 A0A0U1RQG5 324 aaPredicted RBP18.69■□□□□ 0.58
NEDD4-202ENST00000435532 SLF2Q8IX21 1173 aa18.69■□□□□ 0.58
NEDD4-202ENST00000435532 CTNNA3Q9UI47 895 aa18.69■□□□□ 0.58
NEDD4-202ENST00000435532 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
NEDD4-202ENST00000435532 RFC4P35249 363 aa18.69■□□□□ 0.58
NEDD4-202ENST00000435532 NUCB2P80303 420 aa18.69■□□□□ 0.58
NEDD4-202ENST00000435532 FKBP4Q02790 459 aaKnown RBP eCLIP18.69■□□□□ 0.58
NEDD4-202ENST00000435532 FOXD4L6Q3SYB3 417 aaPredicted RBP18.69■□□□□ 0.58
NEDD4-202ENST00000435532 FOXD4L3Q6VB84 417 aaPredicted RBP18.69■□□□□ 0.58
NEDD4-202ENST00000435532 LRRC59Q96AG4 307 aaKnown RBP18.69■□□□□ 0.58
NEDD4-202ENST00000435532 CDK5RAP3Q96JB5 506 aa18.69■□□□□ 0.58
NEDD4-202ENST00000435532 CCDC69A6NI79 296 aa18.68■□□□□ 0.58
NEDD4-202ENST00000435532 MCM10Q7L590 875 aa18.68■□□□□ 0.58
NEDD4-202ENST00000435532 TRMT112Q9UI30 125 aaKnown RBP18.68■□□□□ 0.58
NEDD4-202ENST00000435532 FOSBP53539 338 aa18.68■□□□□ 0.58
NEDD4-202ENST00000435532 ST5P78524 1137 aa18.68■□□□□ 0.58
NEDD4-202ENST00000435532 C1orf115Q9H7X2 142 aa18.68■□□□□ 0.58
NEDD4-202ENST00000435532 SOGA3Q5TF21 947 aa18.68■□□□□ 0.58
NEDD4-202ENST00000435532 MYD88Q99836 296 aa18.67■□□□□ 0.58
NEDD4-202ENST00000435532 TXLNAP40222 546 aa18.67■□□□□ 0.58
NEDD4-202ENST00000435532 EMILIN1Q9Y6C2 1016 aa18.67■□□□□ 0.58
NEDD4-202ENST00000435532 ZMYM3Q14202 1370 aa18.67■□□□□ 0.58
NEDD4-202ENST00000435532 TDO2P48775 406 aa18.67■□□□□ 0.58
NEDD4-202ENST00000435532 PPP1R42Q7Z4L9 355 aa18.67■□□□□ 0.58
NEDD4-202ENST00000435532 TRIM22Q8IYM9 498 aa18.67■□□□□ 0.58
NEDD4-202ENST00000435532 C22orf23Q9BZE7 217 aa18.66■□□□□ 0.58
NEDD4-202ENST00000435532 MCM2P49736 904 aa18.66■□□□□ 0.58
NEDD4-202ENST00000435532 NBPF14Q5TI25 921 aa18.66■□□□□ 0.58
NEDD4-202ENST00000435532 ANKRD36BQ8N2N9 1353 aa18.66■□□□□ 0.58
NEDD4-202ENST00000435532 WDR97A6NE52 1622 aa18.66■□□□□ 0.58
NEDD4-202ENST00000435532 CDCA7LQ96GN5 454 aa18.66■□□□□ 0.58
NEDD4-202ENST00000435532 ANKRD1Q15327 319 aa18.66■□□□□ 0.58
NEDD4-202ENST00000435532 RPAP2Q8IXW5 612 aaPredicted RBP18.66■□□□□ 0.58
NEDD4-202ENST00000435532 HSPA2P54652 639 aa18.65■□□□□ 0.58
NEDD4-202ENST00000435532 IFIT5Q13325 482 aaKnown RBP18.65■□□□□ 0.58
NEDD4-202ENST00000435532 CHRNA2Q15822 529 aa18.65■□□□□ 0.58
NEDD4-202ENST00000435532 ATP10AO60312 1499 aa18.65■□□□□ 0.58
NEDD4-202ENST00000435532 ZCRB1Q8TBF4 217 aaKnown RBP18.65■□□□□ 0.58
NEDD4-202ENST00000435532 SLC5A1P13866 664 aa18.65■□□□□ 0.58
NEDD4-202ENST00000435532 ANKRD18BA2A2Z9 1011 aa18.64■□□□□ 0.58
NEDD4-202ENST00000435532 DBF4Q9UBU7 674 aaPredicted RBP18.64■□□□□ 0.58
NEDD4-202ENST00000435532 NUP160Q12769 1436 aa18.64■□□□□ 0.57
NEDD4-202ENST00000435532 EPS15P42566 896 aa18.64■□□□□ 0.57
NEDD4-202ENST00000435532 TRAPPC8Q9Y2L5 1435 aa18.64■□□□□ 0.57
NEDD4-202ENST00000435532 PDCP20941 246 aa18.63■□□□□ 0.57
NEDD4-202ENST00000435532 MVPQ14764 893 aaKnown RBP18.63■□□□□ 0.57
NEDD4-202ENST00000435532 DDB1Q16531 1140 aa18.63■□□□□ 0.57
NEDD4-202ENST00000435532 MPHOSPH10O00566 681 aaKnown RBP18.63■□□□□ 0.57
NEDD4-202ENST00000435532 RAB11FIP3O75154 756 aa18.63■□□□□ 0.57
NEDD4-202ENST00000435532 CDC5LQ99459 802 aaKnown RBP18.63■□□□□ 0.57
NEDD4-202ENST00000435532 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
NEDD4-202ENST00000435532 CCDC70Q6NSX1 233 aa18.62■□□□□ 0.57
NEDD4-202ENST00000435532 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
NEDD4-202ENST00000435532 CRACR2BQ8N4Y2 399 aaPredicted RBP18.62■□□□□ 0.57
NEDD4-202ENST00000435532 AIDAQ96BJ3 306 aa18.62■□□□□ 0.57
NEDD4-202ENST00000435532 UBAC1Q9BSL1 405 aa18.62■□□□□ 0.57
NEDD4-202ENST00000435532 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
NEDD4-202ENST00000435532 SASS6Q6UVJ0 657 aa18.62■□□□□ 0.57
NEDD4-202ENST00000435532 CHMP5Q9NZZ3 219 aa18.62■□□□□ 0.57
NEDD4-202ENST00000435532 OLFM4Q6UX06 510 aa18.61■□□□□ 0.57
NEDD4-202ENST00000435532 PPIP5K1Q6PFW1 1433 aa18.61■□□□□ 0.57
NEDD4-202ENST00000435532 USP5P45974 858 aa18.61■□□□□ 0.57
NEDD4-202ENST00000435532 ALDH1L2Q3SY69 923 aa18.61■□□□□ 0.57
NEDD4-202ENST00000435532 POLD1P28340 1107 aa18.61■□□□□ 0.57
NEDD4-202ENST00000435532 TTLL12Q14166 644 aaPredicted RBP18.61■□□□□ 0.57
NEDD4-202ENST00000435532 DZIP1Q86YF9 867 aaKnown RBP18.61■□□□□ 0.57
NEDD4-202ENST00000435532 IDH1O75874 414 aaKnown RBP18.61■□□□□ 0.57
NEDD4-202ENST00000435532 KRT18P05783 430 aaKnown RBP18.61■□□□□ 0.57
NEDD4-202ENST00000435532 ZNF396Q96N95 335 aaPredicted RBP18.61■□□□□ 0.57
NEDD4-202ENST00000435532 CYP46A1Q9Y6A2 500 aa18.61■□□□□ 0.57
NEDD4-202ENST00000435532 ABCF2Q9UG63 623 aa18.6■□□□□ 0.57
NEDD4-202ENST00000435532 CDKL5O76039 1030 aa18.6■□□□□ 0.57
NEDD4-202ENST00000435532 GOLGA6L1Q8N7Z2 621 aa18.6■□□□□ 0.57
NEDD4-202ENST00000435532 PDZRN3Q9UPQ7 1066 aa18.6■□□□□ 0.57
NEDD4-202ENST00000435532 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
NEDD4-202ENST00000435532 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
NEDD4-202ENST00000435532 TRPM2O94759 1503 aa18.59■□□□□ 0.57
NEDD4-202ENST00000435532 POLR3DP05423 398 aaPredicted RBP18.59■□□□□ 0.57
NEDD4-202ENST00000435532 PAXIP1Q6ZW49 1069 aaPredicted RBP18.59■□□□□ 0.57
NEDD4-202ENST00000435532 RPRD2Q5VT52 1461 aaKnown RBP18.59■□□□□ 0.57
NEDD4-202ENST00000435532 ZNF622Q969S3 477 aaKnown RBP eCLIP18.59■□□□□ 0.572e-6■■■□□ 17.8
NEDD4-202ENST00000435532 DNAAF4Q8WXU2 420 aa18.58■□□□□ 0.57
NEDD4-202ENST00000435532 BCAR3O75815 825 aa18.58■□□□□ 0.57
NEDD4-202ENST00000435532 KIF1BPQ96EK5 621 aa18.58■□□□□ 0.56
NEDD4-202ENST00000435532 KRT32Q14532 448 aa18.58■□□□□ 0.56
NEDD4-202ENST00000435532 TBX22Q9Y458 520 aa18.58■□□□□ 0.56
NEDD4-202ENST00000435532 C6orf229H3BNL8 230 aa18.57■□□□□ 0.56
NEDD4-202ENST00000435532 CT47A1Q5JQC4 288 aaPredicted RBP18.57■□□□□ 0.56
NEDD4-202ENST00000435532 NOL7Q9UMY1 257 aaKnown RBP18.57■□□□□ 0.56
NEDD4-202ENST00000435532 KDM4AO75164 1064 aa18.57■□□□□ 0.56
NEDD4-202ENST00000435532 NUP133Q8WUM0 1156 aa18.57■□□□□ 0.56
NEDD4-202ENST00000435532 CDCA7Q9BWT1 371 aaPredicted RBP18.57■□□□□ 0.56
NEDD4-202ENST00000435532 NAT10Q9H0A0 1025 aaKnown RBP18.57■□□□□ 0.56
NEDD4-202ENST00000435532 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.57■□□□□ 0.56
NEDD4-202ENST00000435532 RABEP1Q15276 862 aa18.57■□□□□ 0.56
NEDD4-202ENST00000435532 IL2RBP14784 551 aa18.57■□□□□ 0.56
NEDD4-202ENST00000435532 STK11IPQ8N1F8 1099 aa18.57■□□□□ 0.56
NEDD4-202ENST00000435532 MAP3K12Q12852 859 aa18.56■□□□□ 0.56
NEDD4-202ENST00000435532 JMYQ8N9B5 988 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms