RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 ZCRB1Q8TBF4 217 aaKnown RBP19.2■□□□□ 0.66
LINC00028-201ENST00000435497 TUBGCP6Q96RT7 1819 aa19.2■□□□□ 0.66
LINC00028-201ENST00000435497 AMPHP49418 695 aa19.19■□□□□ 0.66
LINC00028-201ENST00000435497 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
LINC00028-201ENST00000435497 SHANK3Q9BYB0 1731 aa19.19■□□□□ 0.66
LINC00028-201ENST00000435497 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
LINC00028-201ENST00000435497 GPR162Q16538 588 aa19.18■□□□□ 0.66
LINC00028-201ENST00000435497 LY75O60449 1722 aa19.17■□□□□ 0.66
LINC00028-201ENST00000435497 MEGF6O75095 1541 aa19.17■□□□□ 0.66
LINC00028-201ENST00000435497 POLD1P28340 1107 aa19.17■□□□□ 0.66
LINC00028-201ENST00000435497 NBPF6Q5VWK0 638 aa19.17■□□□□ 0.66
LINC00028-201ENST00000435497 NBPF4Q96M43 638 aa19.17■□□□□ 0.66
LINC00028-201ENST00000435497 GOLGB1Q14789 3259 aaKnown RBP19.17■□□□□ 0.66
LINC00028-201ENST00000435497 DOT1LQ8TEK3 1739 aa19.17■□□□□ 0.66
LINC00028-201ENST00000435497 RRS1Q15050 365 aaKnown RBP19.16■□□□□ 0.66
LINC00028-201ENST00000435497 KLHL34Q8N239 644 aa19.16■□□□□ 0.66
LINC00028-201ENST00000435497 FYB1O15117 783 aa19.15■□□□□ 0.66
LINC00028-201ENST00000435497 NLGN2Q8NFZ4 835 aa19.15■□□□□ 0.66
LINC00028-201ENST00000435497 C1QTNF8P60827 252 aa19.14■□□□□ 0.65
LINC00028-201ENST00000435497 USHBP1Q8N6Y0 703 aa19.14■□□□□ 0.65
LINC00028-201ENST00000435497 CCNL1Q9UK58 526 aaPredicted RBP19.14■□□□□ 0.65
LINC00028-201ENST00000435497 COL23A1Q86Y22 540 aaPredicted RBP19.13■□□□□ 0.65
LINC00028-201ENST00000435497 GGNBP2Q9H3C7 697 aa19.13■□□□□ 0.65
LINC00028-201ENST00000435497 RTL1A6NKG5 1358 aa19.11■□□□□ 0.65
LINC00028-201ENST00000435497 SLC24A1O60721 1099 aa19.11■□□□□ 0.65
LINC00028-201ENST00000435497 PELP1Q8IZL8 1130 aaKnown RBP19.11■□□□□ 0.65
LINC00028-201ENST00000435497 USP47Q96K76 1375 aa19.09■□□□□ 0.65
LINC00028-201ENST00000435497 CGNL1Q0VF96 1302 aa19.09■□□□□ 0.65
LINC00028-201ENST00000435497 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
LINC00028-201ENST00000435497 HSP90AB2PQ58FF8 381 aa19.09■□□□□ 0.65
LINC00028-201ENST00000435497 YBX3P16989 372 aaKnown RBP eCLIP19.08■□□□□ 0.64
LINC00028-201ENST00000435497 RAPGEF4Q8WZA2 1011 aa19.08■□□□□ 0.64
LINC00028-201ENST00000435497 MSH5O43196 834 aa19.07■□□□□ 0.64
LINC00028-201ENST00000435497 TATP17735 454 aaPredicted RBP19.07■□□□□ 0.64
LINC00028-201ENST00000435497 MSL1Q68DK7 614 aa19.06■□□□□ 0.64
LINC00028-201ENST00000435497 INSRP06213 1382 aa19.06■□□□□ 0.64
LINC00028-201ENST00000435497 CYP27B1O15528 508 aa19.05■□□□□ 0.64
LINC00028-201ENST00000435497 TMF1P82094 1093 aa19.05■□□□□ 0.64
LINC00028-201ENST00000435497 GRIN3BO60391 1043 aa19.03■□□□□ 0.64
LINC00028-201ENST00000435497 MPRIPQ6WCQ1 1025 aa19.03■□□□□ 0.64
LINC00028-201ENST00000435497 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
LINC00028-201ENST00000435497 PCDH11XQ9BZA7 1347 aa19.02■□□□□ 0.64
LINC00028-201ENST00000435497 PCDH11YQ9BZA8 1340 aa19.02■□□□□ 0.64
LINC00028-201ENST00000435497 TAF1LQ8IZX4 1826 aa19.02■□□□□ 0.64
LINC00028-201ENST00000435497 SMG6Q86US8 1419 aaKnown RBP19.02■□□□□ 0.64
LINC00028-201ENST00000435497 GIGYF1O75420 1035 aaPredicted RBP19.02■□□□□ 0.64
LINC00028-201ENST00000435497 AMIGO3Q86WK7 504 aa19.02■□□□□ 0.64
LINC00028-201ENST00000435497 FLT4P35916 1363 aa19.02■□□□□ 0.64
LINC00028-201ENST00000435497 PALLDQ8WX93 1383 aa19.02■□□□□ 0.64
LINC00028-201ENST00000435497 C5P01031 1676 aa19.01■□□□□ 0.63
LINC00028-201ENST00000435497 ITGB4P16144 1822 aa19■□□□□ 0.63
LINC00028-201ENST00000435497 SMIM5Q71RC9 77 aa19■□□□□ 0.63
LINC00028-201ENST00000435497 FLAD1Q8NFF5 587 aa19■□□□□ 0.63
LINC00028-201ENST00000435497 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
LINC00028-201ENST00000435497 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
LINC00028-201ENST00000435497 PIGBQ92521 554 aa18.99■□□□□ 0.63
LINC00028-201ENST00000435497 CD2APQ9Y5K6 639 aa18.99■□□□□ 0.63
LINC00028-201ENST00000435497 KIF20BQ96Q89 1820 aa18.99■□□□□ 0.63
LINC00028-201ENST00000435497 TOGARAM1Q9Y4F4 1720 aa18.99■□□□□ 0.63
LINC00028-201ENST00000435497 NKX1-1Q15270 411 aaPredicted RBP18.97■□□□□ 0.63
LINC00028-201ENST00000435497 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
LINC00028-201ENST00000435497 NCAPD2Q15021 1401 aa18.96■□□□□ 0.63
LINC00028-201ENST00000435497 C4BP0C0L5 1744 aa18.96■□□□□ 0.63
LINC00028-201ENST00000435497 CEP350Q5VT06 3117 aa18.95■□□□□ 0.62
LINC00028-201ENST00000435497 PKD1L3Q7Z443 1732 aa18.95■□□□□ 0.62
LINC00028-201ENST00000435497 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
LINC00028-201ENST00000435497 CDCA8Q53HL2 280 aa18.95■□□□□ 0.62
LINC00028-201ENST00000435497 UBR3Q6ZT12 1888 aa18.94■□□□□ 0.62
LINC00028-201ENST00000435497 AK7Q96M32 723 aa18.94■□□□□ 0.62
LINC00028-201ENST00000435497 MAP2P11137 1827 aaKnown RBP18.94■□□□□ 0.62
LINC00028-201ENST00000435497 NSD3Q9BZ95 1437 aa18.93■□□□□ 0.62
LINC00028-201ENST00000435497 EYA1Q99502 592 aa18.93■□□□□ 0.62
LINC00028-201ENST00000435497 WASHC2AQ641Q2 1341 aa18.93■□□□□ 0.62
LINC00028-201ENST00000435497 ATP10DQ9P241 1426 aa18.92■□□□□ 0.62
LINC00028-201ENST00000435497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.92■□□□□ 0.62
LINC00028-201ENST00000435497 PPM1GO15355 546 aaPredicted RBP18.92■□□□□ 0.62
LINC00028-201ENST00000435497 PHF14O94880 888 aa18.92■□□□□ 0.62
LINC00028-201ENST00000435497 LINC00116Q8NCU8 138 aa18.92■□□□□ 0.62
LINC00028-201ENST00000435497 LOC102724428A0A0B4J2F2 783 aa18.91■□□□□ 0.62
LINC00028-201ENST00000435497 SIK1P57059 783 aa18.91■□□□□ 0.62
LINC00028-201ENST00000435497 ASAP1Q9ULH1 1129 aa18.91■□□□□ 0.62
LINC00028-201ENST00000435497 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
LINC00028-201ENST00000435497 ITPK1Q13572 414 aa18.9■□□□□ 0.62
LINC00028-201ENST00000435497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.9■□□□□ 0.62
LINC00028-201ENST00000435497 SSFA2P28290 1259 aa18.89■□□□□ 0.61
LINC00028-201ENST00000435497 POLKQ9UBT6 870 aa18.89■□□□□ 0.61
LINC00028-201ENST00000435497 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.61
LINC00028-201ENST00000435497 ADCY9O60503 1353 aa18.89■□□□□ 0.61
LINC00028-201ENST00000435497 ANKRD26Q9UPS8 1709 aa18.88■□□□□ 0.61
LINC00028-201ENST00000435497 IGSF1Q8N6C5 1336 aa18.88■□□□□ 0.61
LINC00028-201ENST00000435497 PHKG2P15735 406 aa18.87■□□□□ 0.61
LINC00028-201ENST00000435497 TMOD3Q9NYL9 352 aa18.87■□□□□ 0.61
LINC00028-201ENST00000435497 ATP6V1AP38606 617 aa18.86■□□□□ 0.61
LINC00028-201ENST00000435497 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
LINC00028-201ENST00000435497 GPBP1L1Q9HC44 474 aaPredicted RBP18.86■□□□□ 0.61
LINC00028-201ENST00000435497 ATG3Q9NT62 314 aa18.86■□□□□ 0.61
LINC00028-201ENST00000435497 GNPATO15228 680 aa18.85■□□□□ 0.61
LINC00028-201ENST00000435497 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
LINC00028-201ENST00000435497 ZNF526Q8TF50 670 aaPredicted RBP18.84■□□□□ 0.61
LINC00028-201ENST00000435497 SLC4A9Q96Q91 983 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms