RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 LRRC37A3O60309 1634 aa21.09■□□□□ 0.97
LIMK1-203ENST00000435201 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
LIMK1-203ENST00000435201 NWD1Q149M9 1564 aa21.08■□□□□ 0.97
LIMK1-203ENST00000435201 LTN1O94822 1766 aa21.08■□□□□ 0.97
LIMK1-203ENST00000435201 NUCB1Q02818 461 aa21.08■□□□□ 0.97
LIMK1-203ENST00000435201 GCC1Q96CN9 775 aa21.07■□□□□ 0.96
LIMK1-203ENST00000435201 SEC24BO95487 1268 aa21.07■□□□□ 0.96
LIMK1-203ENST00000435201 RTL5Q5HYW3 569 aaPredicted RBP21.07■□□□□ 0.96
LIMK1-203ENST00000435201 PTPRCP08575 1304 aa21.06■□□□□ 0.96
LIMK1-203ENST00000435201 NUTM2GQ5VZR2 741 aa21.05■□□□□ 0.96
LIMK1-203ENST00000435201 FOXO3O43524 673 aa21.05■□□□□ 0.96
LIMK1-203ENST00000435201 NFAT5O94916 1531 aa21.04■□□□□ 0.96
LIMK1-203ENST00000435201 INTS3Q68E01 1043 aaKnown RBP21.04■□□□□ 0.96
LIMK1-203ENST00000435201 CHD1LQ86WJ1 897 aa21.04■□□□□ 0.96
LIMK1-203ENST00000435201 RGS12O14924 1447 aa21.03■□□□□ 0.96
LIMK1-203ENST00000435201 C14orf37Q86TY3 774 aa21.03■□□□□ 0.96
LIMK1-203ENST00000435201 TSPYL4Q9UJ04 414 aa21.03■□□□□ 0.96
LIMK1-203ENST00000435201 PHRF1Q9P1Y6 1649 aaKnown RBP21.03■□□□□ 0.96
LIMK1-203ENST00000435201 KRT24Q2M2I5 525 aa21.03■□□□□ 0.96
LIMK1-203ENST00000435201 USP35Q9P2H5 1018 aa21.02■□□□□ 0.96
LIMK1-203ENST00000435201 TBC1D32Q96NH3 1257 aa21.01■□□□□ 0.95
LIMK1-203ENST00000435201 C1orf115Q9H7X2 142 aa21.01■□□□□ 0.95
LIMK1-203ENST00000435201 GNAT3A8MTJ3 354 aa21.01■□□□□ 0.95
LIMK1-203ENST00000435201 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
LIMK1-203ENST00000435201 SLC4A3P48751 1232 aa21■□□□□ 0.95
LIMK1-203ENST00000435201 PSME1Q06323 249 aa21■□□□□ 0.95
LIMK1-203ENST00000435201 BECN1Q14457 450 aa21■□□□□ 0.95
LIMK1-203ENST00000435201 KCNH5Q8NCM2 988 aa21■□□□□ 0.95
LIMK1-203ENST00000435201 MAP3K5Q99683 1374 aa21■□□□□ 0.95
LIMK1-203ENST00000435201 IP6K1Q92551 441 aa20.99■□□□□ 0.95
LIMK1-203ENST00000435201 LNPKQ9C0E8 428 aa20.99■□□□□ 0.95
LIMK1-203ENST00000435201 BABAM1Q9NWV8 329 aa20.98■□□□□ 0.95
LIMK1-203ENST00000435201 SOS1Q07889 1333 aaPredicted RBP20.98■□□□□ 0.95
LIMK1-203ENST00000435201 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
LIMK1-203ENST00000435201 SIRT2Q8IXJ6 389 aa20.97■□□□□ 0.95
LIMK1-203ENST00000435201 ANKRD45Q5TZF3 282 aa20.96■□□□□ 0.95
LIMK1-203ENST00000435201 MIS18AQ9NYP9 233 aa20.96■□□□□ 0.95
LIMK1-203ENST00000435201 FAM208AQ9UK61 1670 aaKnown RBP20.96■□□□□ 0.95
LIMK1-203ENST00000435201 SLC4A2P04920 1241 aa20.96■□□□□ 0.95
LIMK1-203ENST00000435201 LTV1Q96GA3 475 aaPredicted RBP20.96■□□□□ 0.95
LIMK1-203ENST00000435201 KIF1AQ12756 1690 aa20.95■□□□□ 0.94
LIMK1-203ENST00000435201 MSH6P52701 1360 aa20.95■□□□□ 0.94
LIMK1-203ENST00000435201 SLIT3O75094 1523 aa20.94■□□□□ 0.94
LIMK1-203ENST00000435201 BMP2KLQ5H9B9 411 aa20.94■□□□□ 0.94
LIMK1-203ENST00000435201 CACNA1FO60840 1977 aa20.94■□□□□ 0.94
LIMK1-203ENST00000435201 ATP10DQ9P241 1426 aa20.94■□□□□ 0.94
LIMK1-203ENST00000435201 RPAP2Q8IXW5 612 aaPredicted RBP20.93■□□□□ 0.94
LIMK1-203ENST00000435201 ANKRD44Q8N8A2 993 aa20.92■□□□□ 0.94
LIMK1-203ENST00000435201 STK31Q9BXU1 1019 aa20.92■□□□□ 0.94
LIMK1-203ENST00000435201 TRPM3Q9HCF6 1732 aaPredicted RBP20.92■□□□□ 0.94
LIMK1-203ENST00000435201 CCT4P50991 539 aaKnown RBP20.91■□□□□ 0.94
LIMK1-203ENST00000435201 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
LIMK1-203ENST00000435201 IL17REQ8NFR9 667 aa20.91■□□□□ 0.94
LIMK1-203ENST00000435201 C22orf23Q9BZE7 217 aa20.91■□□□□ 0.94
LIMK1-203ENST00000435201 DCTPP1Q9H773 170 aa20.91■□□□□ 0.94
LIMK1-203ENST00000435201 CCDC30Q5VVM6 783 aa20.9■□□□□ 0.94
LIMK1-203ENST00000435201 MFAP1P55081 439 aaKnown RBP20.9■□□□□ 0.94
LIMK1-203ENST00000435201 MED1Q15648 1581 aaPredicted RBP20.89■□□□□ 0.93
LIMK1-203ENST00000435201 USHBP1Q8N6Y0 703 aa20.89■□□□□ 0.93
LIMK1-203ENST00000435201 N4BP2Q86UW6 1770 aaPredicted RBP20.89■□□□□ 0.93
LIMK1-203ENST00000435201 LMO7Q8WWI1 1683 aa20.89■□□□□ 0.93
LIMK1-203ENST00000435201 CEP85Q6P2H3 762 aa20.88■□□□□ 0.93
LIMK1-203ENST00000435201 ORAI2Q96SN7 254 aa20.88■□□□□ 0.93
LIMK1-203ENST00000435201 CEMIPQ8WUJ3 1361 aa20.88■□□□□ 0.93
LIMK1-203ENST00000435201 RGPD2P0DJD1 1756 aa20.88■□□□□ 0.93
LIMK1-203ENST00000435201 DEKP35659 375 aaKnown RBP20.88■□□□□ 0.93
LIMK1-203ENST00000435201 NBPF6Q5VWK0 638 aa20.88■□□□□ 0.93
LIMK1-203ENST00000435201 PROSER2Q86WR7 435 aaPredicted RBP20.88■□□□□ 0.93
LIMK1-203ENST00000435201 NBPF4Q96M43 638 aa20.88■□□□□ 0.93
LIMK1-203ENST00000435201 G2E3Q7L622 706 aa20.87■□□□□ 0.93
LIMK1-203ENST00000435201 MST1RQ04912 1400 aa20.86■□□□□ 0.93
LIMK1-203ENST00000435201 NCAPD2Q15021 1401 aa20.86■□□□□ 0.93
LIMK1-203ENST00000435201 C1orf167Q5SNV9 1468 aa20.86■□□□□ 0.93
LIMK1-203ENST00000435201 GCP02774 474 aa20.86■□□□□ 0.93
LIMK1-203ENST00000435201 ARHGEF25Q86VW2 580 aa20.86■□□□□ 0.93
LIMK1-203ENST00000435201 MEIS3Q99687 375 aa20.86■□□□□ 0.93
LIMK1-203ENST00000435201 CAMTA1Q9Y6Y1 1673 aa20.85■□□□□ 0.93
LIMK1-203ENST00000435201 NFKBIBQ15653 356 aa20.85■□□□□ 0.93
LIMK1-203ENST00000435201 KDM3BQ7LBC6 1761 aa20.85■□□□□ 0.93
LIMK1-203ENST00000435201 PXDNLA1KZ92 1463 aa20.84■□□□□ 0.93
LIMK1-203ENST00000435201 HMMRO75330 724 aa20.84■□□□□ 0.93
LIMK1-203ENST00000435201 C19orf44Q9H6X5 657 aa20.84■□□□□ 0.93
LIMK1-203ENST00000435201 ZBTB7CA1YPR0 619 aa20.84■□□□□ 0.93
LIMK1-203ENST00000435201 FLIIQ13045 1269 aa20.84■□□□□ 0.93
LIMK1-203ENST00000435201 EIF5BO60841 1220 aaKnown RBP20.83■□□□□ 0.92
LIMK1-203ENST00000435201 SLC4A10Q6U841 1118 aa20.83■□□□□ 0.92
LIMK1-203ENST00000435201 RBM25P49756 843 aaKnown RBP20.82■□□□□ 0.92
LIMK1-203ENST00000435201 AMOTQ4VCS5 1084 aa20.82■□□□□ 0.92
LIMK1-203ENST00000435201 PLEKHO1Q53GL0 409 aaPredicted RBP20.82■□□□□ 0.92
LIMK1-203ENST00000435201 KRT28Q7Z3Y7 464 aa20.82■□□□□ 0.92
LIMK1-203ENST00000435201 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
LIMK1-203ENST00000435201 TBC1D2Q9BYX2 928 aa20.82■□□□□ 0.92
LIMK1-203ENST00000435201 ALS2Q96Q42 1657 aa20.82■□□□□ 0.92
LIMK1-203ENST00000435201 F6X3S4 739 aa20.81■□□□□ 0.92
LIMK1-203ENST00000435201 OVOS2A0A0G2JMS6 1433 aa20.81■□□□□ 0.92
LIMK1-203ENST00000435201 XPCQ01831 940 aaPredicted RBP20.81■□□□□ 0.92
LIMK1-203ENST00000435201 FKBP5Q13451 457 aaPredicted RBP20.81■□□□□ 0.92
LIMK1-203ENST00000435201 AKAP4Q5JQC9 854 aa20.81■□□□□ 0.92
LIMK1-203ENST00000435201 DCCP43146 1447 aa20.8■□□□□ 0.92
LIMK1-203ENST00000435201 HOXB7P09629 217 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms