RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 RGPD1P0DJD0 1748 aa11.91□□□□□ -0.5
LINC01007-201ENST00000434537 CANXP27824 592 aaKnown RBP11.9□□□□□ -0.5
LINC01007-201ENST00000434537 NLRP6P59044 892 aa11.9□□□□□ -0.5
LINC01007-201ENST00000434537 NUTM2GQ5VZR2 741 aa11.9□□□□□ -0.5
LINC01007-201ENST00000434537 AEBP1Q8IUX7 1158 aa11.9□□□□□ -0.5
LINC01007-201ENST00000434537 IPO9Q96P70 1041 aaKnown RBP11.9□□□□□ -0.5
LINC01007-201ENST00000434537 COL16A1Q07092 1604 aaPredicted RBP11.9□□□□□ -0.5
LINC01007-201ENST00000434537 EXOSC9Q06265 439 aaKnown RBP11.9□□□□□ -0.5
LINC01007-201ENST00000434537 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
LINC01007-201ENST00000434537 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
LINC01007-201ENST00000434537 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
LINC01007-201ENST00000434537 USP54Q70EL1 1684 aa11.89□□□□□ -0.51
LINC01007-201ENST00000434537 DEKP35659 375 aaKnown RBP11.89□□□□□ -0.51
LINC01007-201ENST00000434537 ANP32AP39687 249 aaKnown RBP11.89□□□□□ -0.51
LINC01007-201ENST00000434537 PDE3AQ14432 1141 aa11.89□□□□□ -0.51
LINC01007-201ENST00000434537 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
LINC01007-201ENST00000434537 PANK1Q8TE04 598 aa11.89□□□□□ -0.51
LINC01007-201ENST00000434537 SLC24A3Q9HC58 644 aa11.89□□□□□ -0.51
LINC01007-201ENST00000434537 LRP6O75581 1613 aa11.88□□□□□ -0.51
LINC01007-201ENST00000434537 ESCO1Q5FWF5 840 aa11.88□□□□□ -0.51
LINC01007-201ENST00000434537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC01007-201ENST00000434537 SBNO1A3KN83 1393 aa11.88□□□□□ -0.51
LINC01007-201ENST00000434537 FLT4P35916 1363 aa11.88□□□□□ -0.51
LINC01007-201ENST00000434537 TNNQ9UQP3 1299 aa11.88□□□□□ -0.51
LINC01007-201ENST00000434537 NCOA3Q9Y6Q9 1424 aa11.87□□□□□ -0.51
LINC01007-201ENST00000434537 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
LINC01007-201ENST00000434537 COG6Q9Y2V7 657 aa11.87□□□□□ -0.51
LINC01007-201ENST00000434537 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
LINC01007-201ENST00000434537 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
LINC01007-201ENST00000434537 RLBP1P12271 317 aa11.86□□□□□ -0.51
LINC01007-201ENST00000434537 AMPHP49418 695 aa11.86□□□□□ -0.51
LINC01007-201ENST00000434537 MEX3CQ5U5Q3 659 aaKnown RBP11.86□□□□□ -0.51
LINC01007-201ENST00000434537 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
LINC01007-201ENST00000434537 AHDC1Q5TGY3 1603 aaPredicted RBP11.86□□□□□ -0.51
LINC01007-201ENST00000434537 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
LINC01007-201ENST00000434537 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
LINC01007-201ENST00000434537 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
LINC01007-201ENST00000434537 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
LINC01007-201ENST00000434537 SKAP1Q86WV1 359 aa11.85□□□□□ -0.51
LINC01007-201ENST00000434537 SSH1Q8WYL5 1049 aa11.85□□□□□ -0.51
LINC01007-201ENST00000434537 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
LINC01007-201ENST00000434537 LTN1O94822 1766 aa11.85□□□□□ -0.51
LINC01007-201ENST00000434537 ARHGEF10O15013 1369 aa11.84□□□□□ -0.51
LINC01007-201ENST00000434537 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
LINC01007-201ENST00000434537 PSME1Q06323 249 aa11.84□□□□□ -0.51
LINC01007-201ENST00000434537 ZNF772Q68DY9 489 aaPredicted RBP11.84□□□□□ -0.51
LINC01007-201ENST00000434537 CLUAP1Q96AJ1 413 aa11.84□□□□□ -0.51
LINC01007-201ENST00000434537 CALD1Q05682 793 aaKnown RBP11.84□□□□□ -0.51
LINC01007-201ENST00000434537 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
LINC01007-201ENST00000434537 UPF1Q92900 1129 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC01007-201ENST00000434537 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 HOXC9P31274 260 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 CENPQQ7L2Z9 268 aaPredicted RBP11.83□□□□□ -0.52
LINC01007-201ENST00000434537 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 IFT57Q9NWB7 429 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 TCERG1O14776 1098 aaKnown RBP11.83□□□□□ -0.52
LINC01007-201ENST00000434537 FOXO3O43524 673 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 ATF3P18847 181 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 XPCQ01831 940 aaPredicted RBP11.83□□□□□ -0.52
LINC01007-201ENST00000434537 TAF7LQ5H9L4 462 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 CADPS2Q86UW7 1296 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 EYA1Q99502 592 aa11.83□□□□□ -0.52
LINC01007-201ENST00000434537 KDRP35968 1356 aa11.82□□□□□ -0.52
LINC01007-201ENST00000434537 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
LINC01007-201ENST00000434537 GNAI1P63096 354 aa11.82□□□□□ -0.52
LINC01007-201ENST00000434537 ZKSCAN2Q63HK3 967 aa11.82□□□□□ -0.52
LINC01007-201ENST00000434537 NFAT5O94916 1531 aa11.82□□□□□ -0.52
LINC01007-201ENST00000434537 C19orf44Q9H6X5 657 aa11.81□□□□□ -0.52
LINC01007-201ENST00000434537 KIF24Q5T7B8 1368 aa11.81□□□□□ -0.52
LINC01007-201ENST00000434537 TRIM27P14373 513 aa11.81□□□□□ -0.52
LINC01007-201ENST00000434537 TSPYL6Q8N831 410 aa11.81□□□□□ -0.52
LINC01007-201ENST00000434537 MCM10Q7L590 875 aa11.8□□□□□ -0.52
LINC01007-201ENST00000434537 FTSJ3Q8IY81 847 aaKnown RBP11.8□□□□□ -0.52
LINC01007-201ENST00000434537 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
LINC01007-201ENST00000434537 C1orf167Q5SNV9 1468 aa11.8□□□□□ -0.52
LINC01007-201ENST00000434537 IGHDP01880 384 aa11.8□□□□□ -0.52
LINC01007-201ENST00000434537 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
LINC01007-201ENST00000434537 TRPM3Q9HCF6 1732 aaPredicted RBP11.79□□□□□ -0.52
LINC01007-201ENST00000434537 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
LINC01007-201ENST00000434537 VAMP4O75379 141 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 PDE4AP27815 886 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 RXRBP28702 533 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 MVPQ14764 893 aaKnown RBP11.79□□□□□ -0.52
LINC01007-201ENST00000434537 MTHFSDQ2M296 383 aaKnown RBP11.79□□□□□ -0.52
LINC01007-201ENST00000434537 ALDH1L2Q3SY69 923 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 CCDC82Q8N4S0 544 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 LTV1Q96GA3 475 aaPredicted RBP11.79□□□□□ -0.52
LINC01007-201ENST00000434537 RTL1A6NKG5 1358 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
LINC01007-201ENST00000434537 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
LINC01007-201ENST00000434537 BRINP3Q76B58 766 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
LINC01007-201ENST00000434537 USP35Q9P2H5 1018 aa11.79□□□□□ -0.52
LINC01007-201ENST00000434537 KIF16BQ96L93 1317 aa11.78□□□□□ -0.52
LINC01007-201ENST00000434537 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
LINC01007-201ENST00000434537 MS4A1P11836 297 aa11.77□□□□□ -0.52
LINC01007-201ENST00000434537 C8orf58Q8NAV2 365 aa11.77□□□□□ -0.52
LINC01007-201ENST00000434537 BACH2Q9BYV9 841 aa11.77□□□□□ -0.52
LINC01007-201ENST00000434537 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms