RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 ARHGEF10O15013 1369 aa31.04■■■□□ 2.56
LMBR1-209ENST00000434453 GSPT1P15170 499 aaKnown RBP31.04■■■□□ 2.56
LMBR1-209ENST00000434453 PLEKHM2Q8IWE5 1019 aa31.04■■■□□ 2.56
LMBR1-209ENST00000434453 AMOTL2Q9Y2J4 779 aa31.04■■■□□ 2.56
LMBR1-209ENST00000434453 FOXO3O43524 673 aa31.02■■■□□ 2.56
LMBR1-209ENST00000434453 ANKRD44Q8N8A2 993 aa31.02■■■□□ 2.56
LMBR1-209ENST00000434453 SLIT1O75093 1534 aa31.02■■■□□ 2.56
LMBR1-209ENST00000434453 MSH6P52701 1360 aa31.02■■■□□ 2.56
LMBR1-209ENST00000434453 ARHGAP23Q9P227 1491 aa31.02■■■□□ 2.56
LMBR1-209ENST00000434453 TTC21AQ8NDW8 1320 aa31.02■■■□□ 2.56
LMBR1-209ENST00000434453 HAP1P54257 671 aaPredicted RBP31.01■■■□□ 2.56
LMBR1-209ENST00000434453 DIP2AQ14689 1571 aa31■■■□□ 2.55
LMBR1-209ENST00000434453 MTHFSDQ2M296 383 aaKnown RBP31■■■□□ 2.55
LMBR1-209ENST00000434453 MIS18AQ9NYP9 233 aa31■■■□□ 2.55
LMBR1-209ENST00000434453 PTPRCP08575 1304 aa30.99■■■□□ 2.55
LMBR1-209ENST00000434453 RTL1A6NKG5 1358 aa30.99■■■□□ 2.55
LMBR1-209ENST00000434453 PIK3C2AO00443 1686 aa30.99■■■□□ 2.55
LMBR1-209ENST00000434453 CD2BP2O95400 341 aaKnown RBP30.99■■■□□ 2.55
LMBR1-209ENST00000434453 CEP85Q6P2H3 762 aa30.99■■■□□ 2.55
LMBR1-209ENST00000434453 KDRP35968 1356 aa30.99■■■□□ 2.55
LMBR1-209ENST00000434453 SBNO1A3KN83 1393 aa30.98■■■□□ 2.55
LMBR1-209ENST00000434453 FLT4P35916 1363 aa30.98■■■□□ 2.55
LMBR1-209ENST00000434453 C16orf71Q8IYS4 520 aaPredicted RBP30.98■■■□□ 2.55
LMBR1-209ENST00000434453 CEP170BQ9Y4F5 1589 aaPredicted RBP30.98■■■□□ 2.55
LMBR1-209ENST00000434453 EID1Q9Y6B2 187 aa30.98■■■□□ 2.55
LMBR1-209ENST00000434453 CDC45O75419 566 aa30.97■■■□□ 2.55
LMBR1-209ENST00000434453 MEIS3Q99687 375 aa30.97■■■□□ 2.55
LMBR1-209ENST00000434453 TBX22Q9Y458 520 aa30.96■■■□□ 2.55
LMBR1-209ENST00000434453 RPAP2Q8IXW5 612 aaPredicted RBP30.96■■■□□ 2.55
LMBR1-209ENST00000434453 SLC4A2P04920 1241 aa30.94■■■□□ 2.54
LMBR1-209ENST00000434453 TTC22Q5TAA0 569 aa30.94■■■□□ 2.54
LMBR1-209ENST00000434453 OTUD7AQ8TE49 926 aaPredicted RBP30.94■■■□□ 2.54
LMBR1-209ENST00000434453 RBM42Q9BTD8 480 aaKnown RBP30.94■■■□□ 2.54
LMBR1-209ENST00000434453 EYA1Q99502 592 aa30.93■■■□□ 2.54
LMBR1-209ENST00000434453 IGSF1Q8N6C5 1336 aa30.93■■■□□ 2.54
LMBR1-209ENST00000434453 MARF1Q9Y4F3 1742 aaKnown RBP30.92■■■□□ 2.54
LMBR1-209ENST00000434453 G2E3Q7L622 706 aa30.92■■■□□ 2.54
LMBR1-209ENST00000434453 NGDNQ8NEJ9 315 aaKnown RBP30.91■■■□□ 2.54
LMBR1-209ENST00000434453 XRN1Q8IZH2 1706 aaKnown RBP30.9■■■□□ 2.54
LMBR1-209ENST00000434453 HSP90AB1P08238 724 aaKnown RBP30.9■■■□□ 2.54
LMBR1-209ENST00000434453 TSPYL4Q9UJ04 414 aa30.9■■■□□ 2.54
LMBR1-209ENST00000434453 LRRC37A3O60309 1634 aa30.89■■■□□ 2.54
LMBR1-209ENST00000434453 TRAK2O60296 914 aa30.89■■■□□ 2.53
LMBR1-209ENST00000434453 RTF1Q92541 710 aaKnown RBP30.88■■■□□ 2.53
LMBR1-209ENST00000434453 SMARCA5O60264 1052 aaPredicted RBP30.88■■■□□ 2.53
LMBR1-209ENST00000434453 CIZ1Q9ULV3 898 aaPredicted RBP30.88■■■□□ 2.53
LMBR1-209ENST00000434453 FSD2A1L4K1 749 aa30.86■■■□□ 2.53
LMBR1-209ENST00000434453 AMPHP49418 695 aa30.86■■■□□ 2.53
LMBR1-209ENST00000434453 F6X3S4 739 aa30.86■■■□□ 2.53
LMBR1-209ENST00000434453 K7ELQ4 463 aaPredicted RBP30.86■■■□□ 2.53
LMBR1-209ENST00000434453 TNPO1Q92973 898 aaKnown RBP30.86■■■□□ 2.53
LMBR1-209ENST00000434453 GZF1Q9H116 711 aaPredicted RBP30.85■■■□□ 2.53
LMBR1-209ENST00000434453 NWD1Q149M9 1564 aa30.85■■■□□ 2.53
LMBR1-209ENST00000434453 L1TD1Q5T7N2 865 aaKnown RBP30.84■■■□□ 2.53
LMBR1-209ENST00000434453 RAB3GAP1Q15042 981 aa30.83■■■□□ 2.53
LMBR1-209ENST00000434453 GAS2L2Q8NHY3 880 aa30.83■■■□□ 2.53
LMBR1-209ENST00000434453 FER1L4A9Z1Z3 1794 aa30.83■■■□□ 2.53
LMBR1-209ENST00000434453 PLPPR3Q6T4P5 718 aa30.83■■■□□ 2.53
LMBR1-209ENST00000434453 DDX11L8A8MPP1 907 aa30.82■■■□□ 2.52
LMBR1-209ENST00000434453 SDSP20132 328 aa30.82■■■□□ 2.52
LMBR1-209ENST00000434453 FAM208AQ9UK61 1670 aaKnown RBP30.82■■■□□ 2.52
LMBR1-209ENST00000434453 APBB1O00213 710 aa30.82■■■□□ 2.52
LMBR1-209ENST00000434453 USP26Q9BXU7 913 aa30.81■■■□□ 2.52
LMBR1-209ENST00000434453 NLRP6P59044 892 aa30.81■■■□□ 2.52
LMBR1-209ENST00000434453 SLC4A10Q6U841 1118 aa30.81■■■□□ 2.52
LMBR1-209ENST00000434453 USP54Q70EL1 1684 aa30.8■■■□□ 2.52
LMBR1-209ENST00000434453 DNAJC5Q9H3Z4 198 aa30.8■■■□□ 2.52
LMBR1-209ENST00000434453 FOXD4L1Q9NU39 408 aa30.8■■■□□ 2.52
LMBR1-209ENST00000434453 ANKARQ7Z5J8 1434 aa30.79■■■□□ 2.52
LMBR1-209ENST00000434453 CCT4P50991 539 aaKnown RBP30.79■■■□□ 2.52
LMBR1-209ENST00000434453 HOXC9P31274 260 aa30.78■■■□□ 2.52
LMBR1-209ENST00000434453 CACNA1FO60840 1977 aa30.78■■■□□ 2.52
LMBR1-209ENST00000434453 HTATSF1O43719 755 aaKnown RBP30.78■■■□□ 2.52
LMBR1-209ENST00000434453 XRCC6P12956 609 aaKnown RBP eCLIP30.78■■■□□ 2.52
LMBR1-209ENST00000434453 THEMISQ8N1K5 641 aaPredicted RBP30.78■■■□□ 2.52
LMBR1-209ENST00000434453 NUTM2GQ5VZR2 741 aa30.77■■■□□ 2.52
LMBR1-209ENST00000434453 KCNA6P17658 529 aa30.77■■■□□ 2.52
LMBR1-209ENST00000434453 GOLGA6L3A6NEY3 463 aa30.76■■■□□ 2.51
LMBR1-209ENST00000434453 AK9Q5TCS8 1911 aa30.75■■■□□ 2.51
LMBR1-209ENST00000434453 HSP90AA1P07900 732 aaKnown RBP30.75■■■□□ 2.51
LMBR1-209ENST00000434453 EIF5BO60841 1220 aaKnown RBP30.74■■■□□ 2.51
LMBR1-209ENST00000434453 HMMRO75330 724 aa30.74■■■□□ 2.51
LMBR1-209ENST00000434453 TUBGCP6Q96RT7 1819 aa30.74■■■□□ 2.51
LMBR1-209ENST00000434453 GNAT3A8MTJ3 354 aa30.74■■■□□ 2.51
LMBR1-209ENST00000434453 RABEP1Q15276 862 aa30.74■■■□□ 2.51
LMBR1-209ENST00000434453 IL17REQ8NFR9 667 aa30.73■■■□□ 2.51
LMBR1-209ENST00000434453 ARXQ96QS3 562 aa30.73■■■□□ 2.51
LMBR1-209ENST00000434453 STK31Q9BXU1 1019 aa30.72■■■□□ 2.51
LMBR1-209ENST00000434453 N4BP2Q86UW6 1770 aaPredicted RBP30.72■■■□□ 2.51
LMBR1-209ENST00000434453 FLIIQ13045 1269 aa30.71■■■□□ 2.51
LMBR1-209ENST00000434453 OSBPL3Q9H4L5 887 aa30.71■■■□□ 2.51
LMBR1-209ENST00000434453 FAM43AQ8N2R8 423 aa30.7■■■□□ 2.51
LMBR1-209ENST00000434453 GBP4Q96PP9 640 aa30.7■■■□□ 2.51
LMBR1-209ENST00000434453 GNAI2P04899 355 aa30.7■■■□□ 2.5
LMBR1-209ENST00000434453 MAP3K5Q99683 1374 aa30.7■■■□□ 2.5
LMBR1-209ENST00000434453 PDE1AP54750 535 aa30.69■■■□□ 2.5
LMBR1-209ENST00000434453 CCDC30Q5VVM6 783 aa30.69■■■□□ 2.5
LMBR1-209ENST00000434453 PANK2Q9BZ23 570 aa30.69■■■□□ 2.5
LMBR1-209ENST00000434453 SSFA2P28290 1259 aa30.68■■■□□ 2.5
LMBR1-209ENST00000434453 SALL3Q9BXA9 1300 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms