RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
NEFM-202ENST00000433454 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
NEFM-202ENST00000433454 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
NEFM-202ENST00000433454 PLIN1O60240 522 aa13.67□□□□□ -0.22
NEFM-202ENST00000433454 RARSP54136 660 aaKnown RBP13.67□□□□□ -0.22
NEFM-202ENST00000433454 NLRP2Q9NX02 1062 aa13.67□□□□□ -0.22
NEFM-202ENST00000433454 MBIPQ9NS73 344 aa13.67□□□□□ -0.22
NEFM-202ENST00000433454 BCAR3O75815 825 aa13.66□□□□□ -0.22
NEFM-202ENST00000433454 AMOTQ4VCS5 1084 aa13.66□□□□□ -0.22
NEFM-202ENST00000433454 PPP4R2Q9NY27 417 aa13.66□□□□□ -0.22
NEFM-202ENST00000433454 COL16A1Q07092 1604 aaPredicted RBP13.66□□□□□ -0.22
NEFM-202ENST00000433454 CRB1P82279 1406 aa13.66□□□□□ -0.22
NEFM-202ENST00000433454 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
NEFM-202ENST00000433454 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.22
NEFM-202ENST00000433454 PLEKHG2Q9H7P9 1386 aa13.64□□□□□ -0.23
NEFM-202ENST00000433454 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
NEFM-202ENST00000433454 CANXP27824 592 aaKnown RBP13.64□□□□□ -0.23
NEFM-202ENST00000433454 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
NEFM-202ENST00000433454 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
NEFM-202ENST00000433454 CHL1O00533 1208 aa13.63□□□□□ -0.23
NEFM-202ENST00000433454 ZNF530Q6P9A1 599 aaPredicted RBP13.63□□□□□ -0.23
NEFM-202ENST00000433454 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
NEFM-202ENST00000433454 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
NEFM-202ENST00000433454 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
NEFM-202ENST00000433454 BCL2L13Q9BXK5 485 aa13.62□□□□□ -0.23
NEFM-202ENST00000433454 MEGF6O75095 1541 aa13.62□□□□□ -0.23
NEFM-202ENST00000433454 C1orf141Q5JVX7 400 aa13.62□□□□□ -0.23
NEFM-202ENST00000433454 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
NEFM-202ENST00000433454 COL14A1Q05707 1796 aaKnown RBP13.62□□□□□ -0.23
NEFM-202ENST00000433454 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
NEFM-202ENST00000433454 C20orf194Q5TEA3 1177 aa13.61□□□□□ -0.23
NEFM-202ENST00000433454 EXOC6Q8TAG9 804 aa13.61□□□□□ -0.23
NEFM-202ENST00000433454 CEMIPQ8WUJ3 1361 aa13.61□□□□□ -0.23
NEFM-202ENST00000433454 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
NEFM-202ENST00000433454 IL17REQ8NFR9 667 aa13.61□□□□□ -0.23
NEFM-202ENST00000433454 FRAT1Q92837 279 aaPredicted RBP13.61□□□□□ -0.23
NEFM-202ENST00000433454 OVOS2A0A0G2JMS6 1433 aa13.6□□□□□ -0.23
NEFM-202ENST00000433454 TOM1L2Q6ZVM7 507 aa13.6□□□□□ -0.23
NEFM-202ENST00000433454 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
NEFM-202ENST00000433454 TSPYL4Q9UJ04 414 aa13.6□□□□□ -0.23
NEFM-202ENST00000433454 PDE3AQ14432 1141 aa13.6□□□□□ -0.23
NEFM-202ENST00000433454 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
NEFM-202ENST00000433454 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
NEFM-202ENST00000433454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.23
NEFM-202ENST00000433454 PKD1L3Q7Z443 1732 aa13.6□□□□□ -0.23
NEFM-202ENST00000433454 PARP4Q9UKK3 1724 aaKnown RBP13.6□□□□□ -0.23
NEFM-202ENST00000433454 TSPYL6Q8N831 410 aa13.59□□□□□ -0.23
NEFM-202ENST00000433454 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
NEFM-202ENST00000433454 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
NEFM-202ENST00000433454 VAMP4O75379 141 aa13.59□□□□□ -0.23
NEFM-202ENST00000433454 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
NEFM-202ENST00000433454 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
NEFM-202ENST00000433454 SPG7Q9UQ90 795 aa13.59□□□□□ -0.23
NEFM-202ENST00000433454 EVA1CP58658 441 aa13.58□□□□□ -0.23
NEFM-202ENST00000433454 TAF7Q15545 349 aaPredicted RBP13.58□□□□□ -0.24
NEFM-202ENST00000433454 CARD10Q9BWT7 1032 aa13.58□□□□□ -0.24
NEFM-202ENST00000433454 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
NEFM-202ENST00000433454 ELL2O00472 640 aaPredicted RBP13.57□□□□□ -0.24
NEFM-202ENST00000433454 B4GALNT3Q6L9W6 998 aa13.57□□□□□ -0.24
NEFM-202ENST00000433454 CCDC136Q96JN2 1154 aa13.57□□□□□ -0.24
NEFM-202ENST00000433454 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
NEFM-202ENST00000433454 ADAMTS7Q9UKP4 1686 aa13.57□□□□□ -0.24
NEFM-202ENST00000433454 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
NEFM-202ENST00000433454 MPRIPQ6WCQ1 1025 aa13.57□□□□□ -0.24
NEFM-202ENST00000433454 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
NEFM-202ENST00000433454 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
NEFM-202ENST00000433454 TEFQ10587 303 aa13.56□□□□□ -0.24
NEFM-202ENST00000433454 LARP1Q6PKG0 1096 aaKnown RBP13.56□□□□□ -0.24
NEFM-202ENST00000433454 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
NEFM-202ENST00000433454 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
NEFM-202ENST00000433454 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
NEFM-202ENST00000433454 RNMTO43148 476 aaKnown RBP13.55□□□□□ -0.24
NEFM-202ENST00000433454 MS4A1P11836 297 aa13.55□□□□□ -0.24
NEFM-202ENST00000433454 PLCH1Q4KWH8 1693 aa13.55□□□□□ -0.24
NEFM-202ENST00000433454 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
NEFM-202ENST00000433454 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
NEFM-202ENST00000433454 PANK1Q8TE04 598 aa13.55□□□□□ -0.24
NEFM-202ENST00000433454 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
NEFM-202ENST00000433454 PHKG2P15735 406 aa13.54□□□□□ -0.24
NEFM-202ENST00000433454 FTSJ3Q8IY81 847 aaKnown RBP13.54□□□□□ -0.24
NEFM-202ENST00000433454 IFNL2Q8IZJ0 200 aa13.54□□□□□ -0.24
NEFM-202ENST00000433454 SCN11AQ9UI33 1791 aa13.54□□□□□ -0.24
NEFM-202ENST00000433454 IL2RBP14784 551 aa13.54□□□□□ -0.24
NEFM-202ENST00000433454 ATF7IPQ6VMQ6 1270 aa13.54□□□□□ -0.24
NEFM-202ENST00000433454 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
NEFM-202ENST00000433454 SIPA1L3O60292 1781 aaPredicted RBP13.54□□□□□ -0.24
NEFM-202ENST00000433454 MRPL50Q8N5N7 158 aaKnown RBP13.53□□□□□ -0.24
NEFM-202ENST00000433454 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
NEFM-202ENST00000433454 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
NEFM-202ENST00000433454 TRIM27P14373 513 aa13.53□□□□□ -0.24
NEFM-202ENST00000433454 DZIP1LQ8IYY4 767 aaKnown RBP13.53□□□□□ -0.24
NEFM-202ENST00000433454 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
NEFM-202ENST00000433454 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
NEFM-202ENST00000433454 KDM6AO15550 1401 aaPredicted RBP13.53□□□□□ -0.24
NEFM-202ENST00000433454 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.24
NEFM-202ENST00000433454 CLUAP1Q96AJ1 413 aa13.52□□□□□ -0.24
NEFM-202ENST00000433454 COG6Q9Y2V7 657 aa13.52□□□□□ -0.24
NEFM-202ENST00000433454 JCADQ9P266 1359 aa13.52□□□□□ -0.25
NEFM-202ENST00000433454 BTBD11A6QL63 1104 aa13.52□□□□□ -0.25
NEFM-202ENST00000433454 CYP27B1O15528 508 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms