RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LARP6Q9BRS8 491 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-202ENST00000433297 KRT24Q2M2I5 525 aa13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 PALD1Q9ULE6 856 aa13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 NSD2O96028 1365 aa13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 NFE2L2Q16236 605 aa13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 SLC4A10Q6U841 1118 aa13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 ZNF771Q7L3S4 317 aaPredicted RBP13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 GTPBP4Q9BZE4 634 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 ARHGAP31Q2M1Z3 1444 aa13.98□□□□□ -0.17
HMGCS1-202ENST00000433297 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-202ENST00000433297 BBXQ8WY36 941 aaPredicted RBP13.97□□□□□ -0.17
HMGCS1-202ENST00000433297 MCCP23508 829 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 ANKRD44Q8N8A2 993 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 ADGRB2O60241 1585 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 FIBPO43427 364 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 BRPF1P55201 1214 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 FGD1P98174 961 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 GIMAP6Q6P9H5 292 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 MEIS3Q99687 375 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 MED14O60244 1454 aa13.96□□□□□ -0.17
HMGCS1-202ENST00000433297 CEP85Q6P2H3 762 aa13.96□□□□□ -0.18
HMGCS1-202ENST00000433297 FAM184AQ8NB25 1140 aa13.96□□□□□ -0.18
HMGCS1-202ENST00000433297 MYOM2P54296 1465 aa13.95□□□□□ -0.18
HMGCS1-202ENST00000433297 CHMP3Q9Y3E7 222 aa13.95□□□□□ -0.18
HMGCS1-202ENST00000433297 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
HMGCS1-202ENST00000433297 PYCARDQ9ULZ3 195 aa13.95□□□□□ -0.18
HMGCS1-202ENST00000433297 DIAPH3Q9NSV4 1193 aa13.95□□□□□ -0.18
HMGCS1-202ENST00000433297 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
HMGCS1-202ENST00000433297 LETM1O95202 739 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 HDGFL2Q7Z4V5 671 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 RPAP2Q8IXW5 612 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 IFT57Q9NWB7 429 aa13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 KIF20AO95235 890 aa13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 CCDC183Q5T5S1 534 aa13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 KDM4AO75164 1064 aa13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 MCM2P49736 904 aa13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 UVSSAQ2YD98 709 aa13.94□□□□□ -0.18
HMGCS1-202ENST00000433297 GTF2F1P35269 517 aaKnown RBP eCLIP13.93□□□□□ -0.186e-42■■■■□ 22.6
HMGCS1-202ENST00000433297 PDE1AP54750 535 aa13.93□□□□□ -0.18
HMGCS1-202ENST00000433297 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
HMGCS1-202ENST00000433297 PTCH1Q13635 1447 aa13.93□□□□□ -0.18
HMGCS1-202ENST00000433297 WDR33Q9C0J8 1336 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-202ENST00000433297 KIAA1210Q9ULL0 1709 aa13.92□□□□□ -0.18
HMGCS1-202ENST00000433297 MX1P20591 662 aa13.92□□□□□ -0.18
HMGCS1-202ENST00000433297 EMILIN1Q9Y6C2 1016 aa13.92□□□□□ -0.18
HMGCS1-202ENST00000433297 DRC7Q8IY82 874 aa13.92□□□□□ -0.18
HMGCS1-202ENST00000433297 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
HMGCS1-202ENST00000433297 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
HMGCS1-202ENST00000433297 PRAM1Q96QH2 718 aa13.91□□□□□ -0.18
HMGCS1-202ENST00000433297 ESYT1Q9BSJ8 1104 aa13.91□□□□□ -0.18
HMGCS1-202ENST00000433297 CUL4AQ13619 759 aa13.91□□□□□ -0.18
HMGCS1-202ENST00000433297 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-202ENST00000433297 QRICH2Q9H0J4 1663 aa13.9□□□□□ -0.18
HMGCS1-202ENST00000433297 F6X3S4 739 aa13.9□□□□□ -0.18
HMGCS1-202ENST00000433297 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-202ENST00000433297 KIAA1524Q8TCG1 905 aa13.9□□□□□ -0.18
HMGCS1-202ENST00000433297 C16orf45Q96MC5 204 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-202ENST00000433297 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
HMGCS1-202ENST00000433297 AP5Z1O43299 807 aa13.89□□□□□ -0.19
HMGCS1-202ENST00000433297 HMMRO75330 724 aa13.89□□□□□ -0.19
HMGCS1-202ENST00000433297 MAP4K4O95819 1239 aaPredicted RBP13.89□□□□□ -0.19
HMGCS1-202ENST00000433297 KCNF1Q9H3M0 494 aa13.89□□□□□ -0.19
HMGCS1-202ENST00000433297 ZBTB22O15209 634 aa13.89□□□□□ -0.19
HMGCS1-202ENST00000433297 ZNF592Q92610 1267 aa13.89□□□□□ -0.19
HMGCS1-202ENST00000433297 INTS4Q96HW7 963 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-202ENST00000433297 NAA30Q147X3 362 aaPredicted RBP13.89□□□□□ -0.19
HMGCS1-202ENST00000433297 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 PTGS1P23219 599 aa13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 MSH6P52701 1360 aa13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 TET3O43151 1660 aa13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 ABCC1P33527 1531 aa13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 GOLGA6L6A8MZA4 724 aa13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 CAMK4Q16566 473 aa13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 MIS18AQ9NYP9 233 aa13.88□□□□□ -0.19
HMGCS1-202ENST00000433297 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
HMGCS1-202ENST00000433297 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-202ENST00000433297 UBE2HP62256 183 aa13.87□□□□□ -0.19
HMGCS1-202ENST00000433297 VGLL3A8MV65 326 aa13.87□□□□□ -0.19
HMGCS1-202ENST00000433297 RRS1Q15050 365 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-202ENST00000433297 CDK19Q9BWU1 502 aa13.87□□□□□ -0.19
HMGCS1-202ENST00000433297 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 MCM10Q7L590 875 aa13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 TULP4Q9NRJ4 1543 aa13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 CHMLP26374 656 aa13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 LMOD3Q0VAK6 560 aa13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 SMC3Q9UQE7 1217 aa13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 KIF1BO60333 1816 aa13.86□□□□□ -0.19
HMGCS1-202ENST00000433297 DNM1Q05193 864 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-202ENST00000433297 LRMPQ12912 555 aa13.85□□□□□ -0.19
HMGCS1-202ENST00000433297 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
HMGCS1-202ENST00000433297 STX6O43752 255 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms