RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 MEGF6O75095 1541 aa34.74■■■■□ 3.15
TMEM248-205ENST00000433271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.73■■■■□ 3.15
TMEM248-205ENST00000433271 USP35Q9P2H5 1018 aa34.73■■■■□ 3.15
TMEM248-205ENST00000433271 LMOD3Q0VAK6 560 aa34.73■■■■□ 3.15
TMEM248-205ENST00000433271 PDE3BQ13370 1112 aa34.73■■■■□ 3.15
TMEM248-205ENST00000433271 IL2RBP14784 551 aa34.72■■■■□ 3.15
TMEM248-205ENST00000433271 USP21Q9UK80 565 aa34.71■■■■□ 3.15
TMEM248-205ENST00000433271 SPATA31A1Q5TZJ5 1347 aa34.71■■■■□ 3.15
TMEM248-205ENST00000433271 CENPBP07199 599 aaPredicted RBP34.7■■■■□ 3.15
TMEM248-205ENST00000433271 SPATA31A5Q5VU36 1347 aa34.7■■■■□ 3.15
TMEM248-205ENST00000433271 SPATA31A7Q8IWB4 1347 aa34.7■■■■□ 3.15
TMEM248-205ENST00000433271 WDR63Q8IWG1 891 aa34.7■■■■□ 3.14
TMEM248-205ENST00000433271 OVOS2A0A0G2JMS6 1433 aa34.69■■■■□ 3.14
TMEM248-205ENST00000433271 DLG5Q8TDM6 1919 aa34.69■■■■□ 3.14
TMEM248-205ENST00000433271 VPS72Q15906 364 aa34.69■■■■□ 3.14
TMEM248-205ENST00000433271 SPG7Q9UQ90 795 aa34.69■■■■□ 3.14
TMEM248-205ENST00000433271 THRAP3Q9Y2W1 955 aaKnown RBP34.69■■■■□ 3.14
TMEM248-205ENST00000433271 GOLGA2Q08379 1002 aa34.68■■■■□ 3.14
TMEM248-205ENST00000433271 AFF2P51816 1311 aa34.67■■■■□ 3.14
TMEM248-205ENST00000433271 HTATSF1O43719 755 aaKnown RBP34.66■■■■□ 3.14
TMEM248-205ENST00000433271 ZNF530Q6P9A1 599 aaPredicted RBP34.66■■■■□ 3.14
TMEM248-205ENST00000433271 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.66■■■■□ 3.14
TMEM248-205ENST00000433271 PARP4Q9UKK3 1724 aaKnown RBP34.66■■■■□ 3.14
TMEM248-205ENST00000433271 GNAT3A8MTJ3 354 aa34.66■■■■□ 3.14
TMEM248-205ENST00000433271 CCDC9Q9Y3X0 531 aaKnown RBP34.66■■■■□ 3.14
TMEM248-205ENST00000433271 MAP3K5Q99683 1374 aa34.64■■■■□ 3.14
TMEM248-205ENST00000433271 AKAP4Q5JQC9 854 aa34.63■■■■□ 3.13
TMEM248-205ENST00000433271 DISP2A7MBM2 1401 aa34.63■■■■□ 3.13
TMEM248-205ENST00000433271 RTF1Q92541 710 aaKnown RBP34.63■■■■□ 3.13
TMEM248-205ENST00000433271 CDCA7LQ96GN5 454 aa34.63■■■■□ 3.13
TMEM248-205ENST00000433271 C1orf141Q5JVX7 400 aa34.62■■■■□ 3.13
TMEM248-205ENST00000433271 ZCRB1Q8TBF4 217 aaKnown RBP34.62■■■■□ 3.13
TMEM248-205ENST00000433271 CDCA7Q9BWT1 371 aaPredicted RBP34.62■■■■□ 3.13
TMEM248-205ENST00000433271 PKD1L3Q7Z443 1732 aa34.62■■■■□ 3.13
TMEM248-205ENST00000433271 CALD1Q05682 793 aaKnown RBP34.61■■■■□ 3.13
TMEM248-205ENST00000433271 BARGINQ6ZT62 677 aa34.6■■■■□ 3.13
TMEM248-205ENST00000433271 IL16Q14005 1332 aa34.59■■■■□ 3.13
TMEM248-205ENST00000433271 E9PSI1 815 aa34.59■■■■□ 3.13
TMEM248-205ENST00000433271 SLFN5Q08AF3 891 aa34.59■■■■□ 3.13
TMEM248-205ENST00000433271 DCTN1Q14203 1278 aa34.59■■■■□ 3.13
TMEM248-205ENST00000433271 MCM10Q7L590 875 aa34.58■■■■□ 3.13
TMEM248-205ENST00000433271 THUMPD2Q9BTF0 503 aaKnown RBP34.58■■■■□ 3.13
TMEM248-205ENST00000433271 IFNL2Q8IZJ0 200 aa34.56■■■■□ 3.12
TMEM248-205ENST00000433271 SPINK5Q9NQ38 1064 aaPredicted RBP34.56■■■■□ 3.12
TMEM248-205ENST00000433271 PHKG2P15735 406 aa34.55■■■■□ 3.12
TMEM248-205ENST00000433271 PCDH11XQ9BZA7 1347 aa34.55■■■■□ 3.12
TMEM248-205ENST00000433271 PCDH11YQ9BZA8 1340 aa34.55■■■■□ 3.12
TMEM248-205ENST00000433271 CYP27B1O15528 508 aa34.55■■■■□ 3.12
TMEM248-205ENST00000433271 TRMT2AQ8IZ69 625 aaKnown RBP34.55■■■■□ 3.12
TMEM248-205ENST00000433271 IL17REQ8NFR9 667 aa34.55■■■■□ 3.12
TMEM248-205ENST00000433271 TRPC5Q9UL62 973 aaPredicted RBP34.55■■■■□ 3.12
TMEM248-205ENST00000433271 WNK3Q9BYP7 1800 aa34.54■■■■□ 3.12
TMEM248-205ENST00000433271 ATRNO75882 1429 aa34.54■■■■□ 3.12
TMEM248-205ENST00000433271 GJD4Q96KN9 370 aaPredicted RBP34.52■■■■□ 3.12
TMEM248-205ENST00000433271 CEMIPQ8WUJ3 1361 aa34.5■■■■□ 3.11
TMEM248-205ENST00000433271 EXOC5O00471 708 aa34.5■■■■□ 3.11
TMEM248-205ENST00000433271 HSP90AB1P08238 724 aaKnown RBP34.5■■■■□ 3.11
TMEM248-205ENST00000433271 DUSP27Q5VZP5 1158 aa34.5■■■■□ 3.11
TMEM248-205ENST00000433271 MPRIPQ6WCQ1 1025 aa34.5■■■■□ 3.11
TMEM248-205ENST00000433271 MYH16Q9H6N6 1097 aa34.5■■■■□ 3.11
TMEM248-205ENST00000433271 IFT57Q9NWB7 429 aa34.49■■■■□ 3.11
TMEM248-205ENST00000433271 FAM98CQ17RN3 349 aaKnown RBP34.48■■■■□ 3.11
TMEM248-205ENST00000433271 QTRT2Q9H974 415 aaKnown RBP34.48■■■■□ 3.11
TMEM248-205ENST00000433271 LGR6Q9HBX8 967 aa34.48■■■■□ 3.11
TMEM248-205ENST00000433271 RNMTO43148 476 aaKnown RBP34.48■■■■□ 3.11
TMEM248-205ENST00000433271 DDX54Q8TDD1 881 aaKnown RBP34.48■■■■□ 3.11
TMEM248-205ENST00000433271 CFAP44Q96MT7 982 aa34.48■■■■□ 3.11
TMEM248-205ENST00000433271 ZNF853P0CG23 659 aa34.47■■■■□ 3.11
TMEM248-205ENST00000433271 GNAI1P63096 354 aa34.47■■■■□ 3.11
TMEM248-205ENST00000433271 SHANK3Q9BYB0 1731 aa34.47■■■■□ 3.11
TMEM248-205ENST00000433271 ZNF772Q68DY9 489 aaPredicted RBP34.46■■■■□ 3.11
TMEM248-205ENST00000433271 DCAF5Q96JK2 942 aa34.46■■■■□ 3.11
TMEM248-205ENST00000433271 TNS2Q63HR2 1409 aa34.46■■■■□ 3.11
TMEM248-205ENST00000433271 NKX1-1Q15270 411 aaPredicted RBP34.45■■■■□ 3.11
TMEM248-205ENST00000433271 DDB1Q16531 1140 aa34.45■■■■□ 3.11
TMEM248-205ENST00000433271 LRRC37A3O60309 1634 aa34.44■■■■□ 3.1
TMEM248-205ENST00000433271 ADAMTS7Q9UKP4 1686 aa34.44■■■■□ 3.1
TMEM248-205ENST00000433271 LAS1LQ9Y4W2 734 aaKnown RBP34.44■■■■□ 3.1
TMEM248-205ENST00000433271 GLI3P10071 1580 aa34.43■■■■□ 3.1
TMEM248-205ENST00000433271 KDM6AO15550 1401 aaPredicted RBP34.42■■■■□ 3.1
TMEM248-205ENST00000433271 FANCIQ9NVI1 1328 aa34.41■■■■□ 3.1
TMEM248-205ENST00000433271 CHL1O00533 1208 aa34.41■■■■□ 3.1
TMEM248-205ENST00000433271 TAF7Q15545 349 aaPredicted RBP34.41■■■■□ 3.1
TMEM248-205ENST00000433271 ONECUT3O60422 494 aaPredicted RBP34.4■■■■□ 3.1
TMEM248-205ENST00000433271 TEFQ10587 303 aa34.4■■■■□ 3.1
TMEM248-205ENST00000433271 TSR2Q969E8 191 aaKnown RBP34.4■■■■□ 3.1
TMEM248-205ENST00000433271 SCN11AQ9UI33 1791 aa34.39■■■■□ 3.1
TMEM248-205ENST00000433271 MBIPQ9NS73 344 aa34.38■■■■□ 3.09
TMEM248-205ENST00000433271 BABAM1Q9NWV8 329 aa34.38■■■■□ 3.09
TMEM248-205ENST00000433271 VIRMAQ69YN4 1812 aaKnown RBP34.37■■■■□ 3.09
TMEM248-205ENST00000433271 THSD7AQ9UPZ6 1657 aa34.36■■■■□ 3.09
TMEM248-205ENST00000433271 SLC52A2Q9HAB3 445 aa34.34■■■■□ 3.09
TMEM248-205ENST00000433271 A0A0G2JS52 829 aa34.33■■■■□ 3.09
TMEM248-205ENST00000433271 MYT1Q01538 1121 aa34.33■■■■□ 3.09
TMEM248-205ENST00000433271 ERVV-2B6SEH9 535 aa34.33■■■■□ 3.09
TMEM248-205ENST00000433271 MIS18AQ9NYP9 233 aa34.33■■■■□ 3.09
TMEM248-205ENST00000433271 TSPYL4Q9UJ04 414 aa34.33■■■■□ 3.09
TMEM248-205ENST00000433271 MRC1P22897 1456 aa34.31■■■■□ 3.08
TMEM248-205ENST00000433271 MARCH10Q8NA82 808 aaPredicted RBP34.31■■■■□ 3.08
TMEM248-205ENST00000433271 NFATC2IPQ8NCF5 419 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms