RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 SETD1BQ9UPS6 1966 aaKnown RBP10.59□□□□□ -0.71
HDAC9-212ENST00000432645 HOXC9P31274 260 aa10.59□□□□□ -0.71
HDAC9-212ENST00000432645 MTHFSDQ2M296 383 aaKnown RBP10.59□□□□□ -0.71
HDAC9-212ENST00000432645 ZNF142P52746 1687 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-212ENST00000432645 NALCNQ8IZF0 1738 aa10.59□□□□□ -0.71
HDAC9-212ENST00000432645 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
HDAC9-212ENST00000432645 KIF16BQ96L93 1317 aa10.59□□□□□ -0.71
HDAC9-212ENST00000432645 FMN2Q9NZ56 1722 aa10.58□□□□□ -0.72
HDAC9-212ENST00000432645 IPO8O15397 1037 aaKnown RBP10.58□□□□□ -0.72
HDAC9-212ENST00000432645 ALDH1L2Q3SY69 923 aa10.58□□□□□ -0.72
HDAC9-212ENST00000432645 USHBP1Q8N6Y0 703 aa10.58□□□□□ -0.72
HDAC9-212ENST00000432645 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
HDAC9-212ENST00000432645 ADGRL3Q9HAR2 1447 aa10.57□□□□□ -0.72
HDAC9-212ENST00000432645 DDX19BQ9UMR2 479 aa10.57□□□□□ -0.72
HDAC9-212ENST00000432645 DLG5Q8TDM6 1919 aa10.56□□□□□ -0.72
HDAC9-212ENST00000432645 MRPL50Q8N5N7 158 aaKnown RBP10.56□□□□□ -0.72
HDAC9-212ENST00000432645 RTF1Q92541 710 aaKnown RBP10.56□□□□□ -0.72
HDAC9-212ENST00000432645 HSPA2P54652 639 aa10.56□□□□□ -0.72
HDAC9-212ENST00000432645 RWDD1Q9H446 243 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-212ENST00000432645 ARHGEF10O15013 1369 aa10.56□□□□□ -0.72
HDAC9-212ENST00000432645 IGSF1Q8N6C5 1336 aa10.56□□□□□ -0.72
HDAC9-212ENST00000432645 C8orf34Q49A92 452 aa10.55□□□□□ -0.72
HDAC9-212ENST00000432645 ZNF428Q96B54 188 aa10.55□□□□□ -0.72
HDAC9-212ENST00000432645 IPO9Q96P70 1041 aaKnown RBP10.55□□□□□ -0.72
HDAC9-212ENST00000432645 CHL1O00533 1208 aa10.54□□□□□ -0.72
HDAC9-212ENST00000432645 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
HDAC9-212ENST00000432645 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
HDAC9-212ENST00000432645 ZBTB40Q9NUA8 1239 aa10.54□□□□□ -0.72
HDAC9-212ENST00000432645 DDX17Q92841 729 aaKnown RBP10.54□□□□□ -0.72
HDAC9-212ENST00000432645 C1orf115Q9H7X2 142 aa10.54□□□□□ -0.72
HDAC9-212ENST00000432645 KDRP35968 1356 aa10.53□□□□□ -0.72
HDAC9-212ENST00000432645 TSPYL4Q9UJ04 414 aa10.53□□□□□ -0.72
HDAC9-212ENST00000432645 RGPD1P0DJD0 1748 aa10.53□□□□□ -0.72
HDAC9-212ENST00000432645 NAP1L5Q96NT1 182 aaPredicted RBP10.53□□□□□ -0.72
HDAC9-212ENST00000432645 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
HDAC9-212ENST00000432645 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.72
HDAC9-212ENST00000432645 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.72
HDAC9-212ENST00000432645 GCP02774 474 aa10.52□□□□□ -0.73
HDAC9-212ENST00000432645 HAP1P54257 671 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-212ENST00000432645 NBPF6Q5VWK0 638 aa10.52□□□□□ -0.73
HDAC9-212ENST00000432645 LRRC59Q96AG4 307 aaKnown RBP10.52□□□□□ -0.73
HDAC9-212ENST00000432645 NBPF4Q96M43 638 aa10.52□□□□□ -0.73
HDAC9-212ENST00000432645 C19orf44Q9H6X5 657 aa10.52□□□□□ -0.73
HDAC9-212ENST00000432645 KRT28Q7Z3Y7 464 aa10.52□□□□□ -0.73
HDAC9-212ENST00000432645 IP6K1Q92551 441 aa10.52□□□□□ -0.73
HDAC9-212ENST00000432645 ZBTB7BO15156 539 aaPredicted RBP10.51□□□□□ -0.73
HDAC9-212ENST00000432645 CRB1P82279 1406 aa10.51□□□□□ -0.73
HDAC9-212ENST00000432645 GNAT3A8MTJ3 354 aa10.51□□□□□ -0.73
HDAC9-212ENST00000432645 ATF3P18847 181 aa10.51□□□□□ -0.73
HDAC9-212ENST00000432645 KCNH5Q8NCM2 988 aa10.51□□□□□ -0.73
HDAC9-212ENST00000432645 ARHGAP45Q92619 1136 aa10.51□□□□□ -0.73
HDAC9-212ENST00000432645 MARF1Q9Y4F3 1742 aaKnown RBP10.51□□□□□ -0.73
HDAC9-212ENST00000432645 NECTIN2Q92692 538 aa10.5□□□□□ -0.73
HDAC9-212ENST00000432645 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
HDAC9-212ENST00000432645 IL17REQ8NFR9 667 aa10.5□□□□□ -0.73
HDAC9-212ENST00000432645 TMEM94Q12767 1356 aa10.5□□□□□ -0.73
HDAC9-212ENST00000432645 HDAC1Q13547 482 aaPredicted RBP10.49□□□□□ -0.73
HDAC9-212ENST00000432645 KIF24Q5T7B8 1368 aa10.49□□□□□ -0.73
HDAC9-212ENST00000432645 ZC3H6P61129 1189 aaKnown RBP10.49□□□□□ -0.73
HDAC9-212ENST00000432645 SEC24BO95487 1268 aa10.49□□□□□ -0.73
HDAC9-212ENST00000432645 API5Q9BZZ5 524 aaKnown RBP10.49□□□□□ -0.73
HDAC9-212ENST00000432645 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
HDAC9-212ENST00000432645 ABCC4O15439 1325 aa10.49□□□□□ -0.73
HDAC9-212ENST00000432645 C1orf167Q5SNV9 1468 aa10.48□□□□□ -0.73
HDAC9-212ENST00000432645 NWD1Q149M9 1564 aa10.48□□□□□ -0.73
HDAC9-212ENST00000432645 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
HDAC9-212ENST00000432645 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
HDAC9-212ENST00000432645 ARHGEF25Q86VW2 580 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 NFAT5O94916 1531 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 RTL5Q5HYW3 569 aaPredicted RBP10.47□□□□□ -0.73
HDAC9-212ENST00000432645 G2E3Q7L622 706 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 LNPKQ9C0E8 428 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 RTL1A6NKG5 1358 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 KIAA0232Q92628 1395 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 MAP3K5Q99683 1374 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 SLC4A3P48751 1232 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 CABLES1Q8TDN4 633 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 LGR6Q9HBX8 967 aa10.47□□□□□ -0.73
HDAC9-212ENST00000432645 LTN1O94822 1766 aa10.46□□□□□ -0.73
HDAC9-212ENST00000432645 MSH6P52701 1360 aa10.46□□□□□ -0.73
HDAC9-212ENST00000432645 F6X3S4 739 aa10.46□□□□□ -0.73
HDAC9-212ENST00000432645 SLC4A10Q6U841 1118 aa10.46□□□□□ -0.73
HDAC9-212ENST00000432645 SMC5Q8IY18 1101 aa10.46□□□□□ -0.73
HDAC9-212ENST00000432645 ANKRD24Q8TF21 1146 aa10.46□□□□□ -0.73
HDAC9-212ENST00000432645 HTATSF1O43719 755 aaKnown RBP10.45□□□□□ -0.74
HDAC9-212ENST00000432645 SIRT2Q8IXJ6 389 aa10.45□□□□□ -0.74
HDAC9-212ENST00000432645 TAF7Q15545 349 aaPredicted RBP10.45□□□□□ -0.74
HDAC9-212ENST00000432645 MPRIPQ6WCQ1 1025 aa10.45□□□□□ -0.74
HDAC9-212ENST00000432645 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
HDAC9-212ENST00000432645 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
HDAC9-212ENST00000432645 ZBTB22O15209 634 aa10.44□□□□□ -0.74
HDAC9-212ENST00000432645 ZNF530Q6P9A1 599 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-212ENST00000432645 CHMP4BQ9H444 224 aaKnown RBP10.44□□□□□ -0.74
HDAC9-212ENST00000432645 STK31Q9BXU1 1019 aa10.44□□□□□ -0.74
HDAC9-212ENST00000432645 USP54Q70EL1 1684 aa10.43□□□□□ -0.74
HDAC9-212ENST00000432645 NUCB1Q02818 461 aa10.43□□□□□ -0.74
HDAC9-212ENST00000432645 INTS3Q68E01 1043 aaKnown RBP10.43□□□□□ -0.74
HDAC9-212ENST00000432645 CHD1LQ86WJ1 897 aa10.43□□□□□ -0.74
HDAC9-212ENST00000432645 RGS12O14924 1447 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms