RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
PMS1-212ENST00000432292 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
PMS1-212ENST00000432292 KIF16BQ96L93 1317 aa20.31■□□□□ 0.84
PMS1-212ENST00000432292 ARHGAP23Q9P227 1491 aa20.31■□□□□ 0.84
PMS1-212ENST00000432292 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
PMS1-212ENST00000432292 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
PMS1-212ENST00000432292 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
PMS1-212ENST00000432292 DDX11L8A8MPP1 907 aa20.3■□□□□ 0.84
PMS1-212ENST00000432292 OVOS2A0A0J9YW53 1432 aa20.29■□□□□ 0.84
PMS1-212ENST00000432292 OVOS2Q6IE36 1432 aa20.29■□□□□ 0.84
PMS1-212ENST00000432292 SLIT1O75093 1534 aa20.29■□□□□ 0.84
PMS1-212ENST00000432292 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
PMS1-212ENST00000432292 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
PMS1-212ENST00000432292 AKAP12Q02952 1782 aa20.29■□□□□ 0.84
PMS1-212ENST00000432292 HSCBQ8IWL3 235 aa20.29■□□□□ 0.84
PMS1-212ENST00000432292 MRPL50Q8N5N7 158 aaKnown RBP20.29■□□□□ 0.84
PMS1-212ENST00000432292 RGPD8O14715 1765 aaPredicted RBP20.28■□□□□ 0.84
PMS1-212ENST00000432292 XPCQ01831 940 aaPredicted RBP20.28■□□□□ 0.84
PMS1-212ENST00000432292 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
PMS1-212ENST00000432292 EYA1Q99502 592 aa20.27■□□□□ 0.83
PMS1-212ENST00000432292 ZBTB40Q9NUA8 1239 aa20.27■□□□□ 0.83
PMS1-212ENST00000432292 R3HCC1Q9Y3T6 440 aaKnown RBP20.27■□□□□ 0.83
PMS1-212ENST00000432292 MTHFSDQ2M296 383 aaKnown RBP20.25■□□□□ 0.83
PMS1-212ENST00000432292 ESCO1Q5FWF5 840 aa20.25■□□□□ 0.83
PMS1-212ENST00000432292 USHBP1Q8N6Y0 703 aa20.25■□□□□ 0.83
PMS1-212ENST00000432292 PRDM4Q9UKN5 801 aa20.25■□□□□ 0.83
PMS1-212ENST00000432292 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
PMS1-212ENST00000432292 AAMPQ13685 434 aa20.25■□□□□ 0.83
PMS1-212ENST00000432292 LMOD2Q6P5Q4 547 aa20.25■□□□□ 0.83
PMS1-212ENST00000432292 TNPO1Q92973 898 aaKnown RBP20.25■□□□□ 0.83
PMS1-212ENST00000432292 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
PMS1-212ENST00000432292 TTC21AQ8NDW8 1320 aa20.24■□□□□ 0.83
PMS1-212ENST00000432292 MSNP26038 577 aaKnown RBP20.24■□□□□ 0.83
PMS1-212ENST00000432292 PRDM10Q9NQV6 1147 aa20.23■□□□□ 0.83
PMS1-212ENST00000432292 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
PMS1-212ENST00000432292 LNPKQ9C0E8 428 aa20.23■□□□□ 0.83
PMS1-212ENST00000432292 PTCH1Q13635 1447 aa20.22■□□□□ 0.83
PMS1-212ENST00000432292 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
PMS1-212ENST00000432292 DLG5Q8TDM6 1919 aa20.22■□□□□ 0.83
PMS1-212ENST00000432292 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
PMS1-212ENST00000432292 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
PMS1-212ENST00000432292 NASPP49321 788 aaPredicted RBP20.21■□□□□ 0.83
PMS1-212ENST00000432292 NECTIN2Q92692 538 aa20.2■□□□□ 0.82
PMS1-212ENST00000432292 RIMS1Q86UR5 1692 aaKnown RBP20.2■□□□□ 0.82
PMS1-212ENST00000432292 SETD1BQ9UPS6 1966 aaKnown RBP20.2■□□□□ 0.82
PMS1-212ENST00000432292 PEAK1Q9H792 1746 aa20.2■□□□□ 0.82
PMS1-212ENST00000432292 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
PMS1-212ENST00000432292 ANP32BQ92688 251 aaKnown RBP20.2■□□□□ 0.82
PMS1-212ENST00000432292 FLT4P35916 1363 aa20.2■□□□□ 0.82
PMS1-212ENST00000432292 ZBTB7BO15156 539 aaPredicted RBP20.19■□□□□ 0.82
PMS1-212ENST00000432292 PSME1Q06323 249 aa20.19■□□□□ 0.82
PMS1-212ENST00000432292 ZSCAN30Q86W11 494 aa20.19■□□□□ 0.82
PMS1-212ENST00000432292 ZHX1Q9UKY1 873 aaPredicted RBP20.19■□□□□ 0.82
PMS1-212ENST00000432292 CEP170BQ9Y4F5 1589 aaPredicted RBP20.19■□□□□ 0.82
PMS1-212ENST00000432292 HDAC1Q13547 482 aaPredicted RBP20.18■□□□□ 0.82
PMS1-212ENST00000432292 CHL1O00533 1208 aa20.18■□□□□ 0.82
PMS1-212ENST00000432292 HOXC9P31274 260 aa20.18■□□□□ 0.82
PMS1-212ENST00000432292 ZNF428Q96B54 188 aa20.18■□□□□ 0.82
PMS1-212ENST00000432292 ORAI2Q96SN7 254 aa20.18■□□□□ 0.82
PMS1-212ENST00000432292 TOPAZ1Q8N9V7 1692 aa20.18■□□□□ 0.82
PMS1-212ENST00000432292 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
PMS1-212ENST00000432292 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
PMS1-212ENST00000432292 OFD1O75665 1012 aa20.17■□□□□ 0.82
PMS1-212ENST00000432292 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
PMS1-212ENST00000432292 GBP4Q96PP9 640 aa20.17■□□□□ 0.82
PMS1-212ENST00000432292 ANKRD45Q5TZF3 282 aa20.16■□□□□ 0.82
PMS1-212ENST00000432292 NCLP19338 710 aaKnown RBP20.15■□□□□ 0.82
PMS1-212ENST00000432292 ISY1Q9ULR0 285 aaKnown RBP20.15■□□□□ 0.82
PMS1-212ENST00000432292 CCDC173Q0VFZ6 552 aa20.15■□□□□ 0.82
PMS1-212ENST00000432292 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.15■□□□□ 0.82
PMS1-212ENST00000432292 SMC5Q8IY18 1101 aa20.15■□□□□ 0.82
PMS1-212ENST00000432292 SLC4A2P04920 1241 aa20.14■□□□□ 0.82
PMS1-212ENST00000432292 UQCRHLA0A096LP55 91 aa20.13■□□□□ 0.81
PMS1-212ENST00000432292 APBB1O00213 710 aa20.13■□□□□ 0.81
PMS1-212ENST00000432292 UQCRHP07919 91 aa20.13■□□□□ 0.81
PMS1-212ENST00000432292 SLC4A10Q6U841 1118 aa20.13■□□□□ 0.81
PMS1-212ENST00000432292 ARHGAP45Q92619 1136 aa20.13■□□□□ 0.81
PMS1-212ENST00000432292 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
PMS1-212ENST00000432292 BRPF1P55201 1214 aaPredicted RBP20.13■□□□□ 0.81
PMS1-212ENST00000432292 SIRT2Q8IXJ6 389 aa20.13■□□□□ 0.81
PMS1-212ENST00000432292 F6X3S4 739 aa20.12■□□□□ 0.81
PMS1-212ENST00000432292 G2E3Q7L622 706 aa20.12■□□□□ 0.81
PMS1-212ENST00000432292 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
PMS1-212ENST00000432292 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
PMS1-212ENST00000432292 ABCC4O15439 1325 aa20.11■□□□□ 0.81
PMS1-212ENST00000432292 PIK3R4Q99570 1358 aa20.1■□□□□ 0.81
PMS1-212ENST00000432292 ARHGEF10O15013 1369 aa20.1■□□□□ 0.81
PMS1-212ENST00000432292 LRRC59Q96AG4 307 aaKnown RBP20.1■□□□□ 0.81
PMS1-212ENST00000432292 PIK3C2AO00443 1686 aa20.1■□□□□ 0.81
PMS1-212ENST00000432292 SSFA2P28290 1259 aa20.1■□□□□ 0.81
PMS1-212ENST00000432292 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
PMS1-212ENST00000432292 XRN1Q8IZH2 1706 aaKnown RBP20.1■□□□□ 0.81
PMS1-212ENST00000432292 PROSER2Q86WR7 435 aaPredicted RBP20.09■□□□□ 0.81
PMS1-212ENST00000432292 GAS2L2Q8NHY3 880 aa20.09■□□□□ 0.81
PMS1-212ENST00000432292 NUCB1Q02818 461 aa20.08■□□□□ 0.81
PMS1-212ENST00000432292 SKOR2Q2VWA4 1001 aaPredicted RBP20.08■□□□□ 0.8
PMS1-212ENST00000432292 CRB1P82279 1406 aa20.07■□□□□ 0.8
PMS1-212ENST00000432292 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
PMS1-212ENST00000432292 NBPF6Q5VWK0 638 aa20.07■□□□□ 0.8
PMS1-212ENST00000432292 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms