RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 GNAI1P63096 354 aa17.87■□□□□ 0.45
RTN1-204ENST00000432103 IFT57Q9NWB7 429 aa17.86■□□□□ 0.45
RTN1-204ENST00000432103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
RTN1-204ENST00000432103 RCAN3Q9UKA8 241 aa17.86■□□□□ 0.45
RTN1-204ENST00000432103 CT47B1P0C2W7 299 aaPredicted RBP17.86■□□□□ 0.45
RTN1-204ENST00000432103 SPATA31A6Q5VVP1 1343 aa17.85■□□□□ 0.45
RTN1-204ENST00000432103 CARD10Q9BWT7 1032 aa17.85■□□□□ 0.45
RTN1-204ENST00000432103 SPG7Q9UQ90 795 aa17.85■□□□□ 0.45
RTN1-204ENST00000432103 MAP3K5Q99683 1374 aa17.85■□□□□ 0.45
RTN1-204ENST00000432103 C1orf141Q5JVX7 400 aa17.84■□□□□ 0.45
RTN1-204ENST00000432103 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
RTN1-204ENST00000432103 BTG4Q9NY30 223 aa17.84■□□□□ 0.45
RTN1-204ENST00000432103 RGPD2P0DJD1 1756 aa17.84■□□□□ 0.45
RTN1-204ENST00000432103 AKAP4Q5JQC9 854 aa17.84■□□□□ 0.45
RTN1-204ENST00000432103 CFAP44Q96MT7 982 aa17.83■□□□□ 0.45
RTN1-204ENST00000432103 CRB1P82279 1406 aa17.83■□□□□ 0.44
RTN1-204ENST00000432103 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.44
RTN1-204ENST00000432103 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
RTN1-204ENST00000432103 ZNF530Q6P9A1 599 aaPredicted RBP17.82■□□□□ 0.44
RTN1-204ENST00000432103 NUTM2BA6NNL0 878 aaPredicted RBP17.81■□□□□ 0.44
RTN1-204ENST00000432103 NUTM2EB1AL46 878 aaPredicted RBP17.81■□□□□ 0.44
RTN1-204ENST00000432103 NUTM2AQ8IVF1 878 aaPredicted RBP17.81■□□□□ 0.44
RTN1-204ENST00000432103 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
RTN1-204ENST00000432103 ADAMTS2O95450 1211 aa17.81■□□□□ 0.44
RTN1-204ENST00000432103 BABAM1Q9NWV8 329 aa17.8■□□□□ 0.44
RTN1-204ENST00000432103 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
RTN1-204ENST00000432103 ZNF853P0CG23 659 aa17.8■□□□□ 0.44
RTN1-204ENST00000432103 MCM10Q7L590 875 aa17.8■□□□□ 0.44
RTN1-204ENST00000432103 LARP1Q6PKG0 1096 aaKnown RBP17.79■□□□□ 0.44
RTN1-204ENST00000432103 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
RTN1-204ENST00000432103 HSP90AB1P08238 724 aaKnown RBP17.78■□□□□ 0.44
RTN1-204ENST00000432103 IL2RBP14784 551 aa17.78■□□□□ 0.44
RTN1-204ENST00000432103 ZNF428Q96B54 188 aa17.78■□□□□ 0.44
RTN1-204ENST00000432103 OVOS2A0A0G2JMS6 1433 aa17.78■□□□□ 0.44
RTN1-204ENST00000432103 DCTN1Q14203 1278 aa17.78■□□□□ 0.44
RTN1-204ENST00000432103 THUMPD2Q9BTF0 503 aaKnown RBP17.78■□□□□ 0.44
RTN1-204ENST00000432103 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
RTN1-204ENST00000432103 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
RTN1-204ENST00000432103 PARP4Q9UKK3 1724 aaKnown RBP17.77■□□□□ 0.44
RTN1-204ENST00000432103 FBXO41Q8TF61 875 aa17.77■□□□□ 0.43
RTN1-204ENST00000432103 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.43
RTN1-204ENST00000432103 CHL1O00533 1208 aa17.76■□□□□ 0.43
RTN1-204ENST00000432103 HSPA1LP34931 641 aa17.76■□□□□ 0.43
RTN1-204ENST00000432103 FKBP8Q14318 412 aa17.76■□□□□ 0.43
RTN1-204ENST00000432103 MEGF6O75095 1541 aa17.76■□□□□ 0.43
RTN1-204ENST00000432103 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
RTN1-204ENST00000432103 CDCA7Q9BWT1 371 aaPredicted RBP17.75■□□□□ 0.43
RTN1-204ENST00000432103 MBIPQ9NS73 344 aa17.75■□□□□ 0.43
RTN1-204ENST00000432103 THRAP3Q9Y2W1 955 aaKnown RBP17.75■□□□□ 0.43
RTN1-204ENST00000432103 PLCH1Q4KWH8 1693 aa17.75■□□□□ 0.43
RTN1-204ENST00000432103 NWD2Q9ULI1 1742 aa17.75■□□□□ 0.43
RTN1-204ENST00000432103 EXOSC9Q06265 439 aaKnown RBP17.75■□□□□ 0.43
RTN1-204ENST00000432103 CEMIPQ8WUJ3 1361 aa17.75■□□□□ 0.43
RTN1-204ENST00000432103 PCDH11XQ9BZA7 1347 aa17.75■□□□□ 0.43
RTN1-204ENST00000432103 PCDH11YQ9BZA8 1340 aa17.75■□□□□ 0.43
RTN1-204ENST00000432103 TEFQ10587 303 aa17.74■□□□□ 0.43
RTN1-204ENST00000432103 TAF7Q15545 349 aaPredicted RBP17.74■□□□□ 0.43
RTN1-204ENST00000432103 IL17REQ8NFR9 667 aa17.74■□□□□ 0.43
RTN1-204ENST00000432103 ZCRB1Q8TBF4 217 aaKnown RBP17.74■□□□□ 0.43
RTN1-204ENST00000432103 RRP1P56182 461 aaKnown RBP17.74■□□□□ 0.43
RTN1-204ENST00000432103 SLIT2O94813 1529 aa17.73■□□□□ 0.43
RTN1-204ENST00000432103 PKD1L3Q7Z443 1732 aa17.73■□□□□ 0.43
RTN1-204ENST00000432103 NGLY1Q96IV0 654 aa17.73■□□□□ 0.43
RTN1-204ENST00000432103 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
RTN1-204ENST00000432103 LRRC37A3O60309 1634 aa17.73■□□□□ 0.43
RTN1-204ENST00000432103 PHKG2P15735 406 aa17.72■□□□□ 0.43
RTN1-204ENST00000432103 RNMTO43148 476 aaKnown RBP17.72■□□□□ 0.43
RTN1-204ENST00000432103 DCAF5Q96JK2 942 aa17.72■□□□□ 0.43
RTN1-204ENST00000432103 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
RTN1-204ENST00000432103 CHMP4AQ9BY43 222 aa17.71■□□□□ 0.43
RTN1-204ENST00000432103 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
RTN1-204ENST00000432103 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.43
RTN1-204ENST00000432103 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.42
RTN1-204ENST00000432103 C8orf37Q96NL8 207 aa17.71■□□□□ 0.42
RTN1-204ENST00000432103 RARSP54136 660 aaKnown RBP17.7■□□□□ 0.42
RTN1-204ENST00000432103 ALDH1L2Q3SY69 923 aa17.7■□□□□ 0.42
RTN1-204ENST00000432103 MPRIPQ6WCQ1 1025 aa17.7■□□□□ 0.42
RTN1-204ENST00000432103 NRAPQ86VF7 1730 aa17.7■□□□□ 0.42
RTN1-204ENST00000432103 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
RTN1-204ENST00000432103 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
RTN1-204ENST00000432103 SPATA31A1Q5TZJ5 1347 aa17.68■□□□□ 0.42
RTN1-204ENST00000432103 LGR6Q9HBX8 967 aa17.68■□□□□ 0.42
RTN1-204ENST00000432103 CANXP27824 592 aaKnown RBP17.68■□□□□ 0.42
RTN1-204ENST00000432103 SPATA31A5Q5VU36 1347 aa17.67■□□□□ 0.42
RTN1-204ENST00000432103 SPATA31A7Q8IWB4 1347 aa17.67■□□□□ 0.42
RTN1-204ENST00000432103 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
RTN1-204ENST00000432103 CYP27B1O15528 508 aa17.67■□□□□ 0.42
RTN1-204ENST00000432103 CCDC9Q9Y3X0 531 aaKnown RBP17.67■□□□□ 0.42
RTN1-204ENST00000432103 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
RTN1-204ENST00000432103 EXOC5O00471 708 aa17.66■□□□□ 0.42
RTN1-204ENST00000432103 MS4A1P11836 297 aa17.66■□□□□ 0.42
RTN1-204ENST00000432103 BARGINQ6ZT62 677 aa17.66■□□□□ 0.42
RTN1-204ENST00000432103 RBM19Q9Y4C8 960 aaKnown RBP17.66■□□□□ 0.42
RTN1-204ENST00000432103 DISP2A7MBM2 1401 aa17.66■□□□□ 0.42
RTN1-204ENST00000432103 VAMP4O75379 141 aa17.66■□□□□ 0.42
RTN1-204ENST00000432103 NKX1-1Q15270 411 aaPredicted RBP17.66■□□□□ 0.42
RTN1-204ENST00000432103 VPS72Q15906 364 aa17.66■□□□□ 0.42
RTN1-204ENST00000432103 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
RTN1-204ENST00000432103 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
RTN1-204ENST00000432103 SLC52A2Q9HAB3 445 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms