RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 CACNA1FO60840 1977 aa16.12■□□□□ 0.17
LINC00840-201ENST00000431737 ANP32AP39687 249 aaKnown RBP16.12■□□□□ 0.17
LINC00840-201ENST00000431737 PROSER2Q86WR7 435 aaPredicted RBP16.12■□□□□ 0.17
LINC00840-201ENST00000431737 TMEM57Q8N5G2 664 aa16.12■□□□□ 0.17
LINC00840-201ENST00000431737 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
LINC00840-201ENST00000431737 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
LINC00840-201ENST00000431737 XIRP1Q702N8 1843 aaKnown RBP16.11■□□□□ 0.17
LINC00840-201ENST00000431737 FAM161AQ3B820 660 aa16.11■□□□□ 0.17
LINC00840-201ENST00000431737 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
LINC00840-201ENST00000431737 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
LINC00840-201ENST00000431737 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
LINC00840-201ENST00000431737 FAM208AQ9UK61 1670 aaKnown RBP16.11■□□□□ 0.17
LINC00840-201ENST00000431737 ITPRIPQ8IWB1 547 aa16.11■□□□□ 0.17
LINC00840-201ENST00000431737 MSH6P52701 1360 aa16.1■□□□□ 0.17
LINC00840-201ENST00000431737 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
LINC00840-201ENST00000431737 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
LINC00840-201ENST00000431737 MCM10Q7L590 875 aa16.09■□□□□ 0.17
LINC00840-201ENST00000431737 ORAI2Q96SN7 254 aa16.09■□□□□ 0.17
LINC00840-201ENST00000431737 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
LINC00840-201ENST00000431737 N4BP2Q86UW6 1770 aaPredicted RBP16.09■□□□□ 0.17
LINC00840-201ENST00000431737 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
LINC00840-201ENST00000431737 CRYBG1Q9Y4K1 1723 aa16.09■□□□□ 0.17
LINC00840-201ENST00000431737 ABCC6O95255 1503 aa16.08■□□□□ 0.17
LINC00840-201ENST00000431737 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
LINC00840-201ENST00000431737 RGS12O14924 1447 aa16.08■□□□□ 0.16
LINC00840-201ENST00000431737 TMEM94Q12767 1356 aa16.08■□□□□ 0.16
LINC00840-201ENST00000431737 STRCQ7RTU9 1775 aa16.08■□□□□ 0.16
LINC00840-201ENST00000431737 RTF1Q92541 710 aaKnown RBP16.07■□□□□ 0.16
LINC00840-201ENST00000431737 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
LINC00840-201ENST00000431737 FOXO3O43524 673 aa16.07■□□□□ 0.16
LINC00840-201ENST00000431737 IPO9Q96P70 1041 aaKnown RBP16.07■□□□□ 0.16
LINC00840-201ENST00000431737 KDM3BQ7LBC6 1761 aa16.07■□□□□ 0.16
LINC00840-201ENST00000431737 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
LINC00840-201ENST00000431737 RGS3P49796 1198 aa16.06■□□□□ 0.16
LINC00840-201ENST00000431737 ARHGEF25Q86VW2 580 aa16.06■□□□□ 0.16
LINC00840-201ENST00000431737 SMC5Q8IY18 1101 aa16.06■□□□□ 0.16
LINC00840-201ENST00000431737 ADAMTS7Q9UKP4 1686 aa16.05■□□□□ 0.16
LINC00840-201ENST00000431737 GNAT3A8MTJ3 354 aa16.05■□□□□ 0.16
LINC00840-201ENST00000431737 OVOS2A0A0G2JMS6 1433 aa16.05■□□□□ 0.16
LINC00840-201ENST00000431737 RGPD5Q99666 1765 aa16.04■□□□□ 0.16
LINC00840-201ENST00000431737 ZBTB7BO15156 539 aaPredicted RBP16.04■□□□□ 0.16
LINC00840-201ENST00000431737 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
LINC00840-201ENST00000431737 PDZRN3Q9UPQ7 1066 aa16.04■□□□□ 0.16
LINC00840-201ENST00000431737 COL18A1P39060 1754 aa16.04■□□□□ 0.16
LINC00840-201ENST00000431737 PTPRCP08575 1304 aa16.04■□□□□ 0.16
LINC00840-201ENST00000431737 CEMIPQ8WUJ3 1361 aa16.04■□□□□ 0.16
LINC00840-201ENST00000431737 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
LINC00840-201ENST00000431737 GCP02774 474 aa16.04■□□□□ 0.16
LINC00840-201ENST00000431737 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
LINC00840-201ENST00000431737 PXDNQ92626 1479 aa16.02■□□□□ 0.16
LINC00840-201ENST00000431737 SIPA1L3O60292 1781 aaPredicted RBP16.02■□□□□ 0.15
LINC00840-201ENST00000431737 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.15
LINC00840-201ENST00000431737 TSPYL4Q9UJ04 414 aa16.02■□□□□ 0.15
LINC00840-201ENST00000431737 PLEKHG2Q9H7P9 1386 aa16.01■□□□□ 0.15
LINC00840-201ENST00000431737 ATF3P18847 181 aa16.01■□□□□ 0.15
LINC00840-201ENST00000431737 NBPF6Q5VWK0 638 aa16.01■□□□□ 0.15
LINC00840-201ENST00000431737 NBPF4Q96M43 638 aa16.01■□□□□ 0.15
LINC00840-201ENST00000431737 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
LINC00840-201ENST00000431737 KRT24Q2M2I5 525 aa16■□□□□ 0.15
LINC00840-201ENST00000431737 LTV1Q96GA3 475 aaPredicted RBP16■□□□□ 0.15
LINC00840-201ENST00000431737 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
LINC00840-201ENST00000431737 TNS3Q68CZ2 1445 aa15.99■□□□□ 0.15
LINC00840-201ENST00000431737 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
LINC00840-201ENST00000431737 XPCQ01831 940 aaPredicted RBP15.98■□□□□ 0.15
LINC00840-201ENST00000431737 USHBP1Q8N6Y0 703 aa15.97■□□□□ 0.15
LINC00840-201ENST00000431737 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
LINC00840-201ENST00000431737 PXDNLA1KZ92 1463 aa15.97■□□□□ 0.15
LINC00840-201ENST00000431737 ATP10DQ9P241 1426 aa15.97■□□□□ 0.15
LINC00840-201ENST00000431737 NUCB1Q02818 461 aa15.96■□□□□ 0.15
LINC00840-201ENST00000431737 TAF7Q15545 349 aaPredicted RBP15.96■□□□□ 0.15
LINC00840-201ENST00000431737 AMOTQ4VCS5 1084 aa15.96■□□□□ 0.15
LINC00840-201ENST00000431737 GCC1Q96CN9 775 aa15.96■□□□□ 0.15
LINC00840-201ENST00000431737 DDRGK1Q96HY6 314 aa15.96■□□□□ 0.15
LINC00840-201ENST00000431737 ANKRD24Q8TF21 1146 aa15.95■□□□□ 0.14
LINC00840-201ENST00000431737 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
LINC00840-201ENST00000431737 ERBB3P21860 1342 aa15.95■□□□□ 0.14
LINC00840-201ENST00000431737 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
LINC00840-201ENST00000431737 ERICH6Q7L0X2 663 aa15.95■□□□□ 0.14
LINC00840-201ENST00000431737 NPM2Q86SE8 214 aaKnown RBP15.95■□□□□ 0.14
LINC00840-201ENST00000431737 PKD1L3Q7Z443 1732 aa15.94■□□□□ 0.14
LINC00840-201ENST00000431737 HSPA2P54652 639 aa15.94■□□□□ 0.14
LINC00840-201ENST00000431737 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
LINC00840-201ENST00000431737 SCN11AQ9UI33 1791 aa15.94■□□□□ 0.14
LINC00840-201ENST00000431737 LRRC59Q96AG4 307 aaKnown RBP15.93■□□□□ 0.14
LINC00840-201ENST00000431737 ZBTB47Q9UFB7 747 aaPredicted RBP15.93■□□□□ 0.14
LINC00840-201ENST00000431737 CPDO75976 1380 aa15.93■□□□□ 0.14
LINC00840-201ENST00000431737 ABCA3Q99758 1704 aa15.93■□□□□ 0.14
LINC00840-201ENST00000431737 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
LINC00840-201ENST00000431737 HOXB7P09629 217 aa15.93■□□□□ 0.14
LINC00840-201ENST00000431737 SIRT2Q8IXJ6 389 aa15.93■□□□□ 0.14
LINC00840-201ENST00000431737 KDM4FA0A1W2PPD8 638 aa15.92■□□□□ 0.14
LINC00840-201ENST00000431737 CCDC30Q5VVM6 783 aa15.92■□□□□ 0.14
LINC00840-201ENST00000431737 SPATA31A3Q5VYP0 1347 aa15.92■□□□□ 0.14
LINC00840-201ENST00000431737 AXIN2Q9Y2T1 843 aa15.91■□□□□ 0.14
LINC00840-201ENST00000431737 PARP4Q9UKK3 1724 aaKnown RBP15.91■□□□□ 0.14
LINC00840-201ENST00000431737 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
LINC00840-201ENST00000431737 ZNF530Q6P9A1 599 aaPredicted RBP15.91■□□□□ 0.14
LINC00840-201ENST00000431737 CHD1LQ86WJ1 897 aa15.91■□□□□ 0.14
LINC00840-201ENST00000431737 STK31Q9BXU1 1019 aa15.91■□□□□ 0.14
LINC00840-201ENST00000431737 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms