RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 EYA1Q99502 592 aa20.89■□□□□ 0.93
TSPAN9-203ENST00000431374 RGPD2P0DJD1 1756 aa20.87■□□□□ 0.93
TSPAN9-203ENST00000431374 NPC1L1Q9UHC9 1359 aa20.86■□□□□ 0.93
TSPAN9-203ENST00000431374 PSDA5PKW4 1024 aaPredicted RBP20.85■□□□□ 0.93
TSPAN9-203ENST00000431374 CC2D1BQ5T0F9 858 aaKnown RBP20.85■□□□□ 0.93
TSPAN9-203ENST00000431374 SBF2Q86WG5 1849 aa20.85■□□□□ 0.93
TSPAN9-203ENST00000431374 NHSQ6T4R5 1651 aa20.83■□□□□ 0.93
TSPAN9-203ENST00000431374 MAP2P11137 1827 aaKnown RBP20.83■□□□□ 0.93
TSPAN9-203ENST00000431374 IGSF1Q8N6C5 1336 aa20.83■□□□□ 0.93
TSPAN9-203ENST00000431374 R3HDM1Q15032 1099 aaKnown RBP20.83■□□□□ 0.93
TSPAN9-203ENST00000431374 PROM2Q8N271 834 aa20.83■□□□□ 0.93
TSPAN9-203ENST00000431374 RREB1Q92766 1687 aa20.83■□□□□ 0.92
TSPAN9-203ENST00000431374 PCDH11XQ9BZA7 1347 aa20.82■□□□□ 0.92
TSPAN9-203ENST00000431374 PCDH11YQ9BZA8 1340 aa20.82■□□□□ 0.92
TSPAN9-203ENST00000431374 RGPD3A6NKT7 1758 aaPredicted RBP20.81■□□□□ 0.92
TSPAN9-203ENST00000431374 RGPD4Q7Z3J3 1758 aa20.81■□□□□ 0.92
TSPAN9-203ENST00000431374 CYP27B1O15528 508 aa20.8■□□□□ 0.92
TSPAN9-203ENST00000431374 PRIM1P49642 420 aaKnown RBP20.8■□□□□ 0.92
TSPAN9-203ENST00000431374 TXNRD1Q16881 649 aa20.8■□□□□ 0.92
TSPAN9-203ENST00000431374 NBPF14Q5TI25 921 aa20.8■□□□□ 0.92
TSPAN9-203ENST00000431374 SHANK3Q9BYB0 1731 aa20.8■□□□□ 0.92
TSPAN9-203ENST00000431374 NUP188Q5SRE5 1749 aa20.79■□□□□ 0.92
TSPAN9-203ENST00000431374 MTHFSP49914 203 aa20.79■□□□□ 0.92
TSPAN9-203ENST00000431374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.92
TSPAN9-203ENST00000431374 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
TSPAN9-203ENST00000431374 IL13P35225 146 aa20.78■□□□□ 0.92
TSPAN9-203ENST00000431374 SYTL4Q96C24 671 aaPredicted RBP20.78■□□□□ 0.92
TSPAN9-203ENST00000431374 SPG7Q9UQ90 795 aa20.78■□□□□ 0.92
TSPAN9-203ENST00000431374 ANO8Q9HCE9 1232 aaPredicted RBP20.77■□□□□ 0.92
TSPAN9-203ENST00000431374 CNGB1Q14028 1251 aaPredicted RBP20.76■□□□□ 0.91
TSPAN9-203ENST00000431374 AEBP1Q8IUX7 1158 aa20.75■□□□□ 0.91
TSPAN9-203ENST00000431374 NKX1-1Q15270 411 aaPredicted RBP20.74■□□□□ 0.91
TSPAN9-203ENST00000431374 PKD1L3Q7Z443 1732 aa20.74■□□□□ 0.91
TSPAN9-203ENST00000431374 KDRP35968 1356 aa20.72■□□□□ 0.91
TSPAN9-203ENST00000431374 PHKG2P15735 406 aa20.72■□□□□ 0.91
TSPAN9-203ENST00000431374 SULT6B1Q6IMI4 303 aa20.72■□□□□ 0.91
TSPAN9-203ENST00000431374 DOT1LQ8TEK3 1739 aa20.72■□□□□ 0.91
TSPAN9-203ENST00000431374 BTAF1O14981 1849 aa20.71■□□□□ 0.91
TSPAN9-203ENST00000431374 IFNL2Q8IZJ0 200 aa20.71■□□□□ 0.91
TSPAN9-203ENST00000431374 PLEKHO1Q53GL0 409 aaPredicted RBP20.7■□□□□ 0.9
TSPAN9-203ENST00000431374 SLC27A3Q5K4L6 730 aa20.7■□□□□ 0.9
TSPAN9-203ENST00000431374 LRRC4BQ9NT99 713 aa20.7■□□□□ 0.9
TSPAN9-203ENST00000431374 DIAPH1O60610 1272 aaKnown RBP20.69■□□□□ 0.9
TSPAN9-203ENST00000431374 STK32BQ9NY57 414 aa20.69■□□□□ 0.9
TSPAN9-203ENST00000431374 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
TSPAN9-203ENST00000431374 SLC15A2Q16348 729 aa20.68■□□□□ 0.9
TSPAN9-203ENST00000431374 AMOTQ4VCS5 1084 aa20.68■□□□□ 0.9
TSPAN9-203ENST00000431374 MPRIPQ6WCQ1 1025 aa20.68■□□□□ 0.9
TSPAN9-203ENST00000431374 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
TSPAN9-203ENST00000431374 LRP5O75197 1615 aa20.66■□□□□ 0.9
TSPAN9-203ENST00000431374 PAPPAQ13219 1627 aa20.65■□□□□ 0.9
TSPAN9-203ENST00000431374 PIGBQ92521 554 aa20.65■□□□□ 0.9
TSPAN9-203ENST00000431374 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.9
TSPAN9-203ENST00000431374 HSP90AB1P08238 724 aaKnown RBP20.64■□□□□ 0.89
TSPAN9-203ENST00000431374 HMOX1P09601 288 aa20.64■□□□□ 0.89
TSPAN9-203ENST00000431374 PPP2R1AP30153 589 aa20.64■□□□□ 0.89
TSPAN9-203ENST00000431374 ZNF827Q17R98 1081 aa20.64■□□□□ 0.89
TSPAN9-203ENST00000431374 CCNL1Q9UK58 526 aaPredicted RBP20.64■□□□□ 0.89
TSPAN9-203ENST00000431374 PALLDQ8WX93 1383 aa20.63■□□□□ 0.89
TSPAN9-203ENST00000431374 KCNQ4P56696 695 aa20.63■□□□□ 0.89
TSPAN9-203ENST00000431374 TMOD3Q9NYL9 352 aa20.63■□□□□ 0.89
TSPAN9-203ENST00000431374 AKT1S1Q96B36 256 aa20.62■□□□□ 0.89
TSPAN9-203ENST00000431374 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
TSPAN9-203ENST00000431374 PDGFDQ9GZP0 370 aaPredicted RBP20.62■□□□□ 0.89
TSPAN9-203ENST00000431374 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
TSPAN9-203ENST00000431374 SMARCC1Q92922 1105 aaPredicted RBP20.61■□□□□ 0.89
TSPAN9-203ENST00000431374 CFAP53Q96M91 514 aa20.61■□□□□ 0.89
TSPAN9-203ENST00000431374 KAT6BQ8WYB5 2073 aa20.61■□□□□ 0.89
TSPAN9-203ENST00000431374 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
TSPAN9-203ENST00000431374 ERVV-2B6SEH9 535 aa20.6■□□□□ 0.89
TSPAN9-203ENST00000431374 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
TSPAN9-203ENST00000431374 U2SURPO15042 1029 aaKnown RBP20.59■□□□□ 0.89
TSPAN9-203ENST00000431374 SPON1Q9HCB6 807 aa20.58■□□□□ 0.89
TSPAN9-203ENST00000431374 LY75O60449 1722 aa20.58■□□□□ 0.88
TSPAN9-203ENST00000431374 AKAP4Q5JQC9 854 aa20.57■□□□□ 0.88
TSPAN9-203ENST00000431374 ASAP1Q9ULH1 1129 aa20.57■□□□□ 0.88
TSPAN9-203ENST00000431374 CASZ1Q86V15 1759 aa20.57■□□□□ 0.88
TSPAN9-203ENST00000431374 ZBTB7AO95365 584 aa20.56■□□□□ 0.88
TSPAN9-203ENST00000431374 DDX10Q13206 875 aaKnown RBP20.56■□□□□ 0.88
TSPAN9-203ENST00000431374 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
TSPAN9-203ENST00000431374 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
TSPAN9-203ENST00000431374 LOC102724428A0A0B4J2F2 783 aa20.54■□□□□ 0.88
TSPAN9-203ENST00000431374 SIK1P57059 783 aa20.54■□□□□ 0.88
TSPAN9-203ENST00000431374 CABP4P57796 275 aa20.54■□□□□ 0.88
TSPAN9-203ENST00000431374 TFCP2L1Q9NZI6 479 aa20.54■□□□□ 0.88
TSPAN9-203ENST00000431374 NUDCQ9Y266 331 aa20.54■□□□□ 0.88
TSPAN9-203ENST00000431374 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
TSPAN9-203ENST00000431374 HMGB2P26583 209 aaKnown RBP20.53■□□□□ 0.88
TSPAN9-203ENST00000431374 MTFR1LQ9H019 292 aa20.53■□□□□ 0.88
TSPAN9-203ENST00000431374 ITGB4P16144 1822 aa20.53■□□□□ 0.88
TSPAN9-203ENST00000431374 RSPH6AQ9H0K4 717 aa20.52■□□□□ 0.88
TSPAN9-203ENST00000431374 PTGER2P43116 358 aa20.51■□□□□ 0.87
TSPAN9-203ENST00000431374 ATF5Q9Y2D1 282 aaPredicted RBP20.51■□□□□ 0.87
TSPAN9-203ENST00000431374 U2AF1L5P0DN76 240 aaPredicted RBP20.5■□□□□ 0.87
TSPAN9-203ENST00000431374 U2AF1Q01081 240 aaKnown RBP eCLIP20.5■□□□□ 0.87
TSPAN9-203ENST00000431374 NFATC2IPQ8NCF5 419 aa20.5■□□□□ 0.87
TSPAN9-203ENST00000431374 RNMTO43148 476 aaKnown RBP20.49■□□□□ 0.87
TSPAN9-203ENST00000431374 PRKAR2BP31323 418 aa20.49■□□□□ 0.87
TSPAN9-203ENST00000431374 ITPK1Q13572 414 aa20.49■□□□□ 0.87
TSPAN9-203ENST00000431374 RALBP1Q15311 655 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms