RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 KRT24Q2M2I5 525 aa21.36■■□□□ 1.01
USHBP1-203ENST00000431146 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
USHBP1-203ENST00000431146 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
USHBP1-203ENST00000431146 MVPQ14764 893 aaKnown RBP21.35■■□□□ 1.01
USHBP1-203ENST00000431146 ARHGEF25Q86VW2 580 aa21.35■■□□□ 1.01
USHBP1-203ENST00000431146 RTF1Q92541 710 aaKnown RBP21.35■■□□□ 1.01
USHBP1-203ENST00000431146 LRRC59Q96AG4 307 aaKnown RBP21.35■■□□□ 1.01
USHBP1-203ENST00000431146 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
USHBP1-203ENST00000431146 ALS2Q96Q42 1657 aa21.35■■□□□ 1.01
USHBP1-203ENST00000431146 USP19O94966 1318 aa21.34■■□□□ 1.01
USHBP1-203ENST00000431146 GAS2L2Q8NHY3 880 aa21.34■■□□□ 1.01
USHBP1-203ENST00000431146 CRB1P82279 1406 aa21.34■■□□□ 1.01
USHBP1-203ENST00000431146 KIF16BQ96L93 1317 aa21.34■■□□□ 1.01
USHBP1-203ENST00000431146 CHL1O00533 1208 aa21.34■■□□□ 1.01
USHBP1-203ENST00000431146 PHRF1Q9P1Y6 1649 aaKnown RBP21.34■■□□□ 1.01
USHBP1-203ENST00000431146 ZC3H6P61129 1189 aaKnown RBP21.32■■□□□ 1
USHBP1-203ENST00000431146 ITPRIPQ8IWB1 547 aa21.32■■□□□ 1
USHBP1-203ENST00000431146 MRPL50Q8N5N7 158 aaKnown RBP21.32■■□□□ 1
USHBP1-203ENST00000431146 ZNF428Q96B54 188 aa21.32■■□□□ 1
USHBP1-203ENST00000431146 PCDHB15Q9Y5E8 787 aa21.32■■□□□ 1
USHBP1-203ENST00000431146 MED1Q15648 1581 aaPredicted RBP21.31■■□□□ 1
USHBP1-203ENST00000431146 RGPD5Q99666 1765 aa21.31■■□□□ 1
USHBP1-203ENST00000431146 TMEM57Q8N5G2 664 aa21.31■■□□□ 1
USHBP1-203ENST00000431146 AXIN2Q9Y2T1 843 aa21.31■■□□□ 1
USHBP1-203ENST00000431146 IPO8O15397 1037 aaKnown RBP21.3■■□□□ 1
USHBP1-203ENST00000431146 MS4A1P11836 297 aa21.3■■□□□ 1
USHBP1-203ENST00000431146 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
USHBP1-203ENST00000431146 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
USHBP1-203ENST00000431146 NPHP3Q7Z494 1330 aa21.29■■□□□ 1
USHBP1-203ENST00000431146 ANKRD24Q8TF21 1146 aa21.28■■□□□ 1
USHBP1-203ENST00000431146 TSPYL4Q9UJ04 414 aa21.28■■□□□ 1
USHBP1-203ENST00000431146 BRPF1P55201 1214 aaPredicted RBP21.27■■□□□ 1
USHBP1-203ENST00000431146 MAP3K5Q99683 1374 aa21.27■■□□□ 1
USHBP1-203ENST00000431146 BRINP3Q76B58 766 aa21.26■□□□□ 0.99
USHBP1-203ENST00000431146 IL17REQ8NFR9 667 aa21.26■□□□□ 0.99
USHBP1-203ENST00000431146 PXDNQ92626 1479 aa21.25■□□□□ 0.99
USHBP1-203ENST00000431146 DDX19BQ9UMR2 479 aa21.25■□□□□ 0.99
USHBP1-203ENST00000431146 RGS3P49796 1198 aa21.25■□□□□ 0.99
USHBP1-203ENST00000431146 LRRC37A3O60309 1634 aa21.25■□□□□ 0.99
USHBP1-203ENST00000431146 TNS3Q68CZ2 1445 aa21.24■□□□□ 0.99
USHBP1-203ENST00000431146 AAMPQ13685 434 aa21.24■□□□□ 0.99
USHBP1-203ENST00000431146 HTATSF1O43719 755 aaKnown RBP21.23■□□□□ 0.99
USHBP1-203ENST00000431146 KIAA0232Q92628 1395 aa21.23■□□□□ 0.99
USHBP1-203ENST00000431146 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
USHBP1-203ENST00000431146 SLAIN2Q9P270 581 aa21.21■□□□□ 0.99
USHBP1-203ENST00000431146 PDE4AP27815 886 aa21.2■□□□□ 0.98
USHBP1-203ENST00000431146 ARHGAP45Q92619 1136 aa21.2■□□□□ 0.98
USHBP1-203ENST00000431146 CHRNA2Q15822 529 aa21.2■□□□□ 0.98
USHBP1-203ENST00000431146 ERBB3P21860 1342 aa21.19■□□□□ 0.98
USHBP1-203ENST00000431146 LGR6Q9HBX8 967 aa21.19■□□□□ 0.98
USHBP1-203ENST00000431146 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
USHBP1-203ENST00000431146 ZBTB40Q9NUA8 1239 aa21.19■□□□□ 0.98
USHBP1-203ENST00000431146 RWDD1Q9H446 243 aaPredicted RBP21.17■□□□□ 0.98
USHBP1-203ENST00000431146 NCAPD2Q15021 1401 aa21.17■□□□□ 0.98
USHBP1-203ENST00000431146 ABCC4O15439 1325 aa21.17■□□□□ 0.98
USHBP1-203ENST00000431146 CRYBG1Q9Y4K1 1723 aa21.17■□□□□ 0.98
USHBP1-203ENST00000431146 TAF7Q15545 349 aaPredicted RBP21.17■□□□□ 0.98
USHBP1-203ENST00000431146 CAMTA1Q9Y6Y1 1673 aa21.16■□□□□ 0.98
USHBP1-203ENST00000431146 PLEKHO1Q53GL0 409 aaPredicted RBP21.16■□□□□ 0.98
USHBP1-203ENST00000431146 BACH2Q9BYV9 841 aa21.16■□□□□ 0.98
USHBP1-203ENST00000431146 COL18A1P39060 1754 aa21.16■□□□□ 0.98
USHBP1-203ENST00000431146 HAP1P54257 671 aaPredicted RBP21.16■□□□□ 0.98
USHBP1-203ENST00000431146 MPRIPQ6WCQ1 1025 aa21.16■□□□□ 0.98
USHBP1-203ENST00000431146 NLRP2Q9NX02 1062 aa21.16■□□□□ 0.98
USHBP1-203ENST00000431146 SLC4A2P04920 1241 aa21.15■□□□□ 0.98
USHBP1-203ENST00000431146 VIRMAQ69YN4 1812 aaKnown RBP21.15■□□□□ 0.98
USHBP1-203ENST00000431146 LMO7Q8WWI1 1683 aa21.15■□□□□ 0.98
USHBP1-203ENST00000431146 NECTIN2Q92692 538 aa21.14■□□□□ 0.98
USHBP1-203ENST00000431146 API5Q9BZZ5 524 aaKnown RBP21.14■□□□□ 0.98
USHBP1-203ENST00000431146 CEMIPQ8WUJ3 1361 aa21.14■□□□□ 0.98
USHBP1-203ENST00000431146 ZBTB7BO15156 539 aaPredicted RBP21.14■□□□□ 0.97
USHBP1-203ENST00000431146 C1orf115Q9H7X2 142 aa21.14■□□□□ 0.97
USHBP1-203ENST00000431146 AKAP4Q5JQC9 854 aa21.13■□□□□ 0.97
USHBP1-203ENST00000431146 AMOTQ4VCS5 1084 aa21.13■□□□□ 0.97
USHBP1-203ENST00000431146 CSB-PGBD3P0DP91 1061 aa21.12■□□□□ 0.97
USHBP1-203ENST00000431146 G2E3Q7L622 706 aa21.12■□□□□ 0.97
USHBP1-203ENST00000431146 PDZRN3Q9UPQ7 1066 aa21.12■□□□□ 0.97
USHBP1-203ENST00000431146 RGS12O14924 1447 aa21.12■□□□□ 0.97
USHBP1-203ENST00000431146 C1orf141Q5JVX7 400 aa21.11■□□□□ 0.97
USHBP1-203ENST00000431146 SOS2Q07890 1332 aaPredicted RBP21.11■□□□□ 0.97
USHBP1-203ENST00000431146 HDAC1Q13547 482 aaPredicted RBP21.1■□□□□ 0.97
USHBP1-203ENST00000431146 FAM208AQ9UK61 1670 aaKnown RBP21.09■□□□□ 0.97
USHBP1-203ENST00000431146 KCNQ3O43525 872 aa21.08■□□□□ 0.97
USHBP1-203ENST00000431146 TEFQ10587 303 aa21.08■□□□□ 0.97
USHBP1-203ENST00000431146 RNMTO43148 476 aaKnown RBP21.08■□□□□ 0.96
USHBP1-203ENST00000431146 NPM2Q86SE8 214 aaKnown RBP21.08■□□□□ 0.96
USHBP1-203ENST00000431146 RAPGEF4Q8WZA2 1011 aa21.08■□□□□ 0.96
USHBP1-203ENST00000431146 PTPRCP08575 1304 aa21.07■□□□□ 0.96
USHBP1-203ENST00000431146 BABAM1Q9NWV8 329 aa21.07■□□□□ 0.96
USHBP1-203ENST00000431146 STK31Q9BXU1 1019 aa21.07■□□□□ 0.96
USHBP1-203ENST00000431146 KDM3BQ7LBC6 1761 aa21.06■□□□□ 0.96
USHBP1-203ENST00000431146 BTBD11A6QL63 1104 aa21.06■□□□□ 0.96
USHBP1-203ENST00000431146 F6X3S4 739 aa21.06■□□□□ 0.96
USHBP1-203ENST00000431146 MSH5O43196 834 aa21.06■□□□□ 0.96
USHBP1-203ENST00000431146 C8orf34Q49A92 452 aa21.06■□□□□ 0.96
USHBP1-203ENST00000431146 MEGF6O75095 1541 aa21.06■□□□□ 0.96
USHBP1-203ENST00000431146 CPDO75976 1380 aa21.06■□□□□ 0.96
USHBP1-203ENST00000431146 CCDC30Q5VVM6 783 aa21.05■□□□□ 0.96
USHBP1-203ENST00000431146 INTS3Q68E01 1043 aaKnown RBP21.05■□□□□ 0.96
USHBP1-203ENST00000431146 PRDM11Q9NQV5 511 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms