RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 TUBGCP6Q96RT7 1819 aa22.68■■□□□ 1.22
PTPRA-206ENST00000430705 KIF24Q5T7B8 1368 aa22.67■■□□□ 1.22
PTPRA-206ENST00000430705 LRRC4BQ9NT99 713 aa22.67■■□□□ 1.22
PTPRA-206ENST00000430705 NCAPD2Q15021 1401 aa22.66■■□□□ 1.22
PTPRA-206ENST00000430705 SMG6Q86US8 1419 aaKnown RBP22.66■■□□□ 1.22
PTPRA-206ENST00000430705 PKD1L3Q7Z443 1732 aa22.66■■□□□ 1.22
PTPRA-206ENST00000430705 TOGARAM1Q9Y4F4 1720 aa22.66■■□□□ 1.22
PTPRA-206ENST00000430705 EMILIN1Q9Y6C2 1016 aa22.66■■□□□ 1.22
PTPRA-206ENST00000430705 QSER1Q2KHR3 1735 aa22.65■■□□□ 1.22
PTPRA-206ENST00000430705 ZBTB7AO95365 584 aa22.65■■□□□ 1.22
PTPRA-206ENST00000430705 ZNF827Q17R98 1081 aa22.65■■□□□ 1.22
PTPRA-206ENST00000430705 STK32BQ9NY57 414 aa22.65■■□□□ 1.22
PTPRA-206ENST00000430705 PTGER2P43116 358 aa22.64■■□□□ 1.21
PTPRA-206ENST00000430705 ZCRB1Q8TBF4 217 aaKnown RBP22.64■■□□□ 1.21
PTPRA-206ENST00000430705 MAP2P11137 1827 aaKnown RBP22.62■■□□□ 1.21
PTPRA-206ENST00000430705 KAT6BQ8WYB5 2073 aa22.62■■□□□ 1.21
PTPRA-206ENST00000430705 HSPA5P11021 654 aaKnown RBP22.61■■□□□ 1.21
PTPRA-206ENST00000430705 PRIM1P49642 420 aaKnown RBP22.61■■□□□ 1.21
PTPRA-206ENST00000430705 COL24A1Q17RW2 1714 aa22.6■■□□□ 1.21
PTPRA-206ENST00000430705 SGIP1Q9BQI5 828 aa22.59■■□□□ 1.21
PTPRA-206ENST00000430705 PPP1R1BQ9UD71 204 aaPredicted RBP22.59■■□□□ 1.21
PTPRA-206ENST00000430705 CGNL1Q0VF96 1302 aa22.58■■□□□ 1.21
PTPRA-206ENST00000430705 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
PTPRA-206ENST00000430705 ATF5Q9Y2D1 282 aaPredicted RBP22.58■■□□□ 1.21
PTPRA-206ENST00000430705 KCNQ4P56696 695 aa22.57■■□□□ 1.2
PTPRA-206ENST00000430705 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
PTPRA-206ENST00000430705 SYTL4Q96C24 671 aaPredicted RBP22.57■■□□□ 1.2
PTPRA-206ENST00000430705 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
PTPRA-206ENST00000430705 RAPGEF4Q8WZA2 1011 aa22.56■■□□□ 1.2
PTPRA-206ENST00000430705 ITGB4P16144 1822 aa22.55■■□□□ 1.2
PTPRA-206ENST00000430705 UTRNP46939 3433 aa22.55■■□□□ 1.2
PTPRA-206ENST00000430705 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
PTPRA-206ENST00000430705 SLC27A3Q5K4L6 730 aa22.55■■□□□ 1.2
PTPRA-206ENST00000430705 POLR3GLQ9BT43 218 aa22.55■■□□□ 1.2
PTPRA-206ENST00000430705 MTFR1LQ9H019 292 aa22.55■■□□□ 1.2
PTPRA-206ENST00000430705 WASHC2AQ641Q2 1341 aa22.55■■□□□ 1.2
PTPRA-206ENST00000430705 CYP27B1O15528 508 aa22.54■■□□□ 1.2
PTPRA-206ENST00000430705 POLKQ9UBT6 870 aa22.54■■□□□ 1.2
PTPRA-206ENST00000430705 C5P01031 1676 aa22.54■■□□□ 1.2
PTPRA-206ENST00000430705 PCDH11XQ9BZA7 1347 aa22.54■■□□□ 1.2
PTPRA-206ENST00000430705 PCDH11YQ9BZA8 1340 aa22.54■■□□□ 1.2
PTPRA-206ENST00000430705 PNPLA7Q6ZV29 1317 aa22.53■■□□□ 1.2
PTPRA-206ENST00000430705 PPM1GO15355 546 aaPredicted RBP22.51■■□□□ 1.19
PTPRA-206ENST00000430705 TAF1LQ8IZX4 1826 aa22.51■■□□□ 1.19
PTPRA-206ENST00000430705 EYA1Q99502 592 aa22.5■■□□□ 1.19
PTPRA-206ENST00000430705 PANK3Q9H999 370 aa22.49■■□□□ 1.19
PTPRA-206ENST00000430705 FHDC1Q9C0D6 1143 aaPredicted RBP22.48■■□□□ 1.19
PTPRA-206ENST00000430705 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
PTPRA-206ENST00000430705 CCNL1Q9UK58 526 aaPredicted RBP22.47■■□□□ 1.19
PTPRA-206ENST00000430705 EIF4A2Q14240 407 aaKnown RBP22.46■■□□□ 1.19
PTPRA-206ENST00000430705 PALLDQ8WX93 1383 aa22.45■■□□□ 1.18
PTPRA-206ENST00000430705 NKX1-1Q15270 411 aaPredicted RBP22.44■■□□□ 1.18
PTPRA-206ENST00000430705 MAP3K5Q99683 1374 aa22.44■■□□□ 1.18
PTPRA-206ENST00000430705 SYT17Q9BSW7 474 aa22.44■■□□□ 1.18
PTPRA-206ENST00000430705 C4BP0C0L5 1744 aa22.43■■□□□ 1.18
PTPRA-206ENST00000430705 IGSF1Q8N6C5 1336 aa22.42■■□□□ 1.18
PTPRA-206ENST00000430705 GOLGB1Q14789 3259 aaKnown RBP22.42■■□□□ 1.18
PTPRA-206ENST00000430705 MPRIPQ6WCQ1 1025 aa22.42■■□□□ 1.18
PTPRA-206ENST00000430705 ARXQ96QS3 562 aa22.42■■□□□ 1.18
PTPRA-206ENST00000430705 TFCP2L1Q9NZI6 479 aa22.42■■□□□ 1.18
PTPRA-206ENST00000430705 SLC16A10Q8TF71 515 aa22.4■■□□□ 1.18
PTPRA-206ENST00000430705 UBR3Q6ZT12 1888 aa22.39■■□□□ 1.18
PTPRA-206ENST00000430705 KIF7Q2M1P5 1343 aa22.39■■□□□ 1.18
PTPRA-206ENST00000430705 PIGBQ92521 554 aa22.39■■□□□ 1.17
PTPRA-206ENST00000430705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.39■■□□□ 1.173e-10■■■□□ 17.8
PTPRA-206ENST00000430705 SPG7Q9UQ90 795 aa22.39■■□□□ 1.17
PTPRA-206ENST00000430705 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
PTPRA-206ENST00000430705 PHKG2P15735 406 aa22.38■■□□□ 1.17
PTPRA-206ENST00000430705 YY1P25490 414 aa22.38■■□□□ 1.17
PTPRA-206ENST00000430705 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
PTPRA-206ENST00000430705 COL23A1Q86Y22 540 aaPredicted RBP22.38■■□□□ 1.17
PTPRA-206ENST00000430705 KDM6AO15550 1401 aaPredicted RBP22.34■■□□□ 1.17
PTPRA-206ENST00000430705 AMER1Q5JTC6 1135 aaPredicted RBP22.34■■□□□ 1.17
PTPRA-206ENST00000430705 MORC1Q86VD1 984 aa22.33■■□□□ 1.17
PTPRA-206ENST00000430705 AEBP1Q8IUX7 1158 aa22.33■■□□□ 1.17
PTPRA-206ENST00000430705 IFNL2Q8IZJ0 200 aa22.33■■□□□ 1.17
PTPRA-206ENST00000430705 SMARCC1Q92922 1105 aaPredicted RBP22.32■■□□□ 1.16
PTPRA-206ENST00000430705 KDRP35968 1356 aa22.32■■□□□ 1.16
PTPRA-206ENST00000430705 MSL1Q68DK7 614 aa22.31■■□□□ 1.16
PTPRA-206ENST00000430705 SMIM5Q71RC9 77 aa22.31■■□□□ 1.16
PTPRA-206ENST00000430705 ASAP1Q9ULH1 1129 aa22.31■■□□□ 1.16
PTPRA-206ENST00000430705 ZNF831Q5JPB2 1677 aa22.3■■□□□ 1.16
PTPRA-206ENST00000430705 POLD1P28340 1107 aa22.3■■□□□ 1.16
PTPRA-206ENST00000430705 LINC00116Q8NCU8 138 aa22.3■■□□□ 1.16
PTPRA-206ENST00000430705 NLGN2Q8NFZ4 835 aa22.3■■□□□ 1.16
PTPRA-206ENST00000430705 TMOD3Q9NYL9 352 aa22.3■■□□□ 1.16
PTPRA-206ENST00000430705 COL5A3P25940 1745 aaPredicted RBP22.3■■□□□ 1.16
PTPRA-206ENST00000430705 DCAF8L1A6NGE4 600 aa22.29■■□□□ 1.16
PTPRA-206ENST00000430705 ITPK1Q13572 414 aa22.29■■□□□ 1.16
PTPRA-206ENST00000430705 KNSTRNQ9Y448 316 aa22.29■■□□□ 1.16
PTPRA-206ENST00000430705 LOC102724428A0A0B4J2F2 783 aa22.28■■□□□ 1.16
PTPRA-206ENST00000430705 SIK1P57059 783 aa22.28■■□□□ 1.16
PTPRA-206ENST00000430705 ATG3Q9NT62 314 aa22.28■■□□□ 1.16
PTPRA-206ENST00000430705 CHD4Q14839 1912 aa22.27■■□□□ 1.16
PTPRA-206ENST00000430705 PER1O15534 1290 aaPredicted RBP22.27■■□□□ 1.16
PTPRA-206ENST00000430705 MSH5O43196 834 aa22.27■■□□□ 1.16
PTPRA-206ENST00000430705 IL13P35225 146 aa22.27■■□□□ 1.16
PTPRA-206ENST00000430705 KLHL34Q8N239 644 aa22.27■■□□□ 1.16
PTPRA-206ENST00000430705 SLC4A9Q96Q91 983 aa22.26■■□□□ 1.15
PTPRA-206ENST00000430705 AK7Q96M32 723 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms