RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-203ENST00000429738 AKT1S1Q96B36 256 aa24.7■■□□□ 1.54
MRPL28-203ENST00000429738 RTL1A6NKG5 1358 aa24.69■■□□□ 1.54
MRPL28-203ENST00000429738 DDX54Q8TDD1 881 aaKnown RBP24.69■■□□□ 1.54
MRPL28-203ENST00000429738 SLC16A10Q8TF71 515 aa24.69■■□□□ 1.54
MRPL28-203ENST00000429738 CARD14Q9BXL6 1004 aa24.69■■□□□ 1.54
MRPL28-203ENST00000429738 RGPD2P0DJD1 1756 aa24.68■■□□□ 1.54
MRPL28-203ENST00000429738 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
MRPL28-203ENST00000429738 AMPHP49418 695 aa24.67■■□□□ 1.54
MRPL28-203ENST00000429738 RRS1Q15050 365 aaKnown RBP24.65■■□□□ 1.54
MRPL28-203ENST00000429738 GPR162Q16538 588 aa24.65■■□□□ 1.54
MRPL28-203ENST00000429738 LTV1Q96GA3 475 aaPredicted RBP24.65■■□□□ 1.54
MRPL28-203ENST00000429738 NSD3Q9BZ95 1437 aa24.65■■□□□ 1.54
MRPL28-203ENST00000429738 POLD1P28340 1107 aa24.63■■□□□ 1.53
MRPL28-203ENST00000429738 PRIM1P49642 420 aaKnown RBP24.62■■□□□ 1.53
MRPL28-203ENST00000429738 PNPLA7Q6ZV29 1317 aa24.61■■□□□ 1.53
MRPL28-203ENST00000429738 C1QTNF8P60827 252 aa24.61■■□□□ 1.53
MRPL28-203ENST00000429738 EIF4G2P78344 907 aaKnown RBP eCLIP24.61■■□□□ 1.53
MRPL28-203ENST00000429738 TFCP2L1Q9NZI6 479 aa24.61■■□□□ 1.53
MRPL28-203ENST00000429738 KIF24Q5T7B8 1368 aa24.61■■□□□ 1.53
MRPL28-203ENST00000429738 SHANK3Q9BYB0 1731 aa24.61■■□□□ 1.53
MRPL28-203ENST00000429738 SYTL4Q96C24 671 aaPredicted RBP24.6■■□□□ 1.53
MRPL28-203ENST00000429738 QSER1Q2KHR3 1735 aa24.6■■□□□ 1.53
MRPL28-203ENST00000429738 HSPA5P11021 654 aaKnown RBP24.59■■□□□ 1.53
MRPL28-203ENST00000429738 KLHL34Q8N239 644 aa24.59■■□□□ 1.53
MRPL28-203ENST00000429738 INSRP06213 1382 aa24.58■■□□□ 1.53
MRPL28-203ENST00000429738 KCNQ4P56696 695 aa24.58■■□□□ 1.53
MRPL28-203ENST00000429738 ZCRB1Q8TBF4 217 aaKnown RBP24.58■■□□□ 1.53
MRPL28-203ENST00000429738 ANKRD26Q9UPS8 1709 aa24.58■■□□□ 1.52
MRPL28-203ENST00000429738 FLT4P35916 1363 aa24.57■■□□□ 1.52
MRPL28-203ENST00000429738 MEGF6O75095 1541 aa24.57■■□□□ 1.52
MRPL28-203ENST00000429738 SENP3-EIF4A1A0A087X0R7 540 aa24.57■■□□□ 1.52
MRPL28-203ENST00000429738 NBPF6Q5VWK0 638 aa24.57■■□□□ 1.52
MRPL28-203ENST00000429738 NBPF4Q96M43 638 aa24.57■■□□□ 1.52
MRPL28-203ENST00000429738 COL24A1Q17RW2 1714 aa24.56■■□□□ 1.52
MRPL28-203ENST00000429738 HSP90AB2PQ58FF8 381 aa24.56■■□□□ 1.52
MRPL28-203ENST00000429738 SMG6Q86US8 1419 aaKnown RBP24.55■■□□□ 1.52
MRPL28-203ENST00000429738 MAP2P11137 1827 aaKnown RBP24.54■■□□□ 1.52
MRPL28-203ENST00000429738 CGNL1Q0VF96 1302 aa24.54■■□□□ 1.52
MRPL28-203ENST00000429738 PELP1Q8IZL8 1130 aaKnown RBP24.53■■□□□ 1.52
MRPL28-203ENST00000429738 NSD2O96028 1365 aa24.53■■□□□ 1.52
MRPL28-203ENST00000429738 CCNL1Q9UK58 526 aaPredicted RBP24.52■■□□□ 1.52
MRPL28-203ENST00000429738 EMILIN1Q9Y6C2 1016 aa24.52■■□□□ 1.52
MRPL28-203ENST00000429738 NLGN2Q8NFZ4 835 aa24.51■■□□□ 1.51
MRPL28-203ENST00000429738 LY75O60449 1722 aa24.51■■□□□ 1.51
MRPL28-203ENST00000429738 GOLGB1Q14789 3259 aaKnown RBP24.5■■□□□ 1.51
MRPL28-203ENST00000429738 DOT1LQ8TEK3 1739 aa24.5■■□□□ 1.51
MRPL28-203ENST00000429738 TUBGCP6Q96RT7 1819 aa24.5■■□□□ 1.51
MRPL28-203ENST00000429738 POLR3GLQ9BT43 218 aa24.5■■□□□ 1.51
MRPL28-203ENST00000429738 USHBP1Q8N6Y0 703 aa24.49■■□□□ 1.51
MRPL28-203ENST00000429738 NCAPD2Q15021 1401 aa24.48■■□□□ 1.51
MRPL28-203ENST00000429738 COL23A1Q86Y22 540 aaPredicted RBP24.48■■□□□ 1.51
MRPL28-203ENST00000429738 MSH5O43196 834 aa24.47■■□□□ 1.51
MRPL28-203ENST00000429738 GRIN3BO60391 1043 aa24.47■■□□□ 1.51
MRPL28-203ENST00000429738 GIGYF1O75420 1035 aaPredicted RBP24.47■■□□□ 1.51
MRPL28-203ENST00000429738 WASHC2AQ641Q2 1341 aa24.46■■□□□ 1.51
MRPL28-203ENST00000429738 RAPGEF4Q8WZA2 1011 aa24.46■■□□□ 1.51
MRPL28-203ENST00000429738 PANK3Q9H999 370 aa24.45■■□□□ 1.5
MRPL28-203ENST00000429738 YBX3P16989 372 aaKnown RBP eCLIP24.44■■□□□ 1.59e-6■□□□□ 10.4
MRPL28-203ENST00000429738 TATP17735 454 aaPredicted RBP24.44■■□□□ 1.5
MRPL28-203ENST00000429738 HMGB2P26583 209 aaKnown RBP24.44■■□□□ 1.5
MRPL28-203ENST00000429738 POLKQ9UBT6 870 aa24.44■■□□□ 1.5
MRPL28-203ENST00000429738 PKD1L3Q7Z443 1732 aa24.43■■□□□ 1.5
MRPL28-203ENST00000429738 PPM1GO15355 546 aaPredicted RBP24.41■■□□□ 1.5
MRPL28-203ENST00000429738 MSL1Q68DK7 614 aa24.4■■□□□ 1.5
MRPL28-203ENST00000429738 FLAD1Q8NFF5 587 aa24.4■■□□□ 1.5
MRPL28-203ENST00000429738 PCDH11XQ9BZA7 1347 aa24.39■■□□□ 1.5
MRPL28-203ENST00000429738 PCDH11YQ9BZA8 1340 aa24.39■■□□□ 1.5
MRPL28-203ENST00000429738 CD2APQ9Y5K6 639 aa24.38■■□□□ 1.49
MRPL28-203ENST00000429738 EYA1Q99502 592 aa24.37■■□□□ 1.49
MRPL28-203ENST00000429738 CYP27B1O15528 508 aa24.36■■□□□ 1.49
MRPL28-203ENST00000429738 TOGARAM1Q9Y4F4 1720 aa24.35■■□□□ 1.49
MRPL28-203ENST00000429738 MPRIPQ6WCQ1 1025 aa24.35■■□□□ 1.49
MRPL28-203ENST00000429738 PALLDQ8WX93 1383 aa24.34■■□□□ 1.49
MRPL28-203ENST00000429738 TNNT2P45379 298 aaPredicted RBP24.34■■□□□ 1.49
MRPL28-203ENST00000429738 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
MRPL28-203ENST00000429738 ITGB4P16144 1822 aa24.33■■□□□ 1.49
MRPL28-203ENST00000429738 EIF4A2Q14240 407 aaKnown RBP24.33■■□□□ 1.49
MRPL28-203ENST00000429738 SMARCC1Q92922 1105 aaPredicted RBP24.33■■□□□ 1.49
MRPL28-203ENST00000429738 C5P01031 1676 aa24.33■■□□□ 1.49
MRPL28-203ENST00000429738 PLEKHG2Q9H7P9 1386 aa24.31■■□□□ 1.48
MRPL28-203ENST00000429738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.31■■□□□ 1.48
MRPL28-203ENST00000429738 TAF1LQ8IZX4 1826 aa24.31■■□□□ 1.48
MRPL28-203ENST00000429738 NKX1-1Q15270 411 aaPredicted RBP24.3■■□□□ 1.48
MRPL28-203ENST00000429738 KNSTRNQ9Y448 316 aa24.29■■□□□ 1.48
MRPL28-203ENST00000429738 IGSF1Q8N6C5 1336 aa24.29■■□□□ 1.48
MRPL28-203ENST00000429738 CEP350Q5VT06 3117 aa24.28■■□□□ 1.48
MRPL28-203ENST00000429738 ATP10DQ9P241 1426 aa24.28■■□□□ 1.48
MRPL28-203ENST00000429738 AMER1Q5JTC6 1135 aaPredicted RBP24.28■■□□□ 1.48
MRPL28-203ENST00000429738 AK7Q96M32 723 aa24.28■■□□□ 1.48
MRPL28-203ENST00000429738 SPG7Q9UQ90 795 aa24.28■■□□□ 1.48
MRPL28-203ENST00000429738 MORC1Q86VD1 984 aa24.27■■□□□ 1.48
MRPL28-203ENST00000429738 PIGBQ92521 554 aa24.27■■□□□ 1.48
MRPL28-203ENST00000429738 AMIGO3Q86WK7 504 aa24.25■■□□□ 1.47
MRPL28-203ENST00000429738 GPBP1L1Q9HC44 474 aaPredicted RBP24.25■■□□□ 1.47
MRPL28-203ENST00000429738 C4BP0C0L5 1744 aa24.24■■□□□ 1.47
MRPL28-203ENST00000429738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.24■■□□□ 1.47
MRPL28-203ENST00000429738 PER1O15534 1290 aaPredicted RBP24.23■■□□□ 1.47
MRPL28-203ENST00000429738 PHF14O94880 888 aa24.22■■□□□ 1.47
MRPL28-203ENST00000429738 PHKG2P15735 406 aa24.22■■□□□ 1.47
MRPL28-203ENST00000429738 SMIM5Q71RC9 77 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms