RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 PPP1R12AO14974 1030 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 REC8O95072 547 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 NUP153P49790 1475 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 PREX2Q70Z35 1606 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 ITSN2Q9NZM3 1697 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 ARID4AP29374 1257 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 KIAA2012Q0VF49 1180 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 BIRC2Q13490 618 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 NAA30Q147X3 362 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 FAXDC2Q96IV6 333 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 AK7Q96M32 723 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 JRKLQ9Y4A0 524 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 SPAG9O60271 1321 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 KIF7Q2M1P5 1343 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 PLEKHG2Q9H7P9 1386 aa5.33□□□□□ -1.56
R3HDM1-206ENST00000429703 PRIM1P49642 420 aaKnown RBP5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 NOLC1Q14978 699 aaKnown RBP eCLIP5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 KLHL40Q2TBA0 621 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 EFCAB3Q8N7B9 438 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 ZNF526Q8TF50 670 aaPredicted RBP5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 DRC1Q96MC2 740 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 KIF2CQ99661 725 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 LARP6Q9BRS8 491 aaKnown RBP5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 PHF8Q9UPP1 1060 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 FHOD3Q2V2M9 1422 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 ATP10BO94823 1461 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 ZBTB7CA1YPR0 619 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 BMS1Q14692 1282 aaKnown RBP5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 ZSCAN23Q3MJ62 389 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 CWC22Q9HCG8 908 aaKnown RBP5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 CCDC39Q9UFE4 941 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 IPO8O15397 1037 aaKnown RBP5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 ROCK2O75116 1388 aaKnown RBP5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 TDO2P48775 406 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 NLRP6P59044 892 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 SYCP1Q15431 976 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 TATDN2Q93075 761 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 TONSLQ96HA7 1378 aa5.32□□□□□ -1.56
R3HDM1-206ENST00000429703 IGHDP01880 384 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 CHAF1AQ13111 956 aaPredicted RBP5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 ADGRL1O94910 1474 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 COL17A1Q9UMD9 1497 aaPredicted RBP5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 PLEKHD1A6NEE1 506 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 SKOR2Q2VWA4 1001 aaPredicted RBP5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 KMT5BQ4FZB7 885 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 RBM26Q5T8P6 1007 aaKnown RBP5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 MORC1Q86VD1 984 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 TMTC2Q8N394 836 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 RBM42Q9BTD8 480 aaKnown RBP5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 KDM4CQ9H3R0 1056 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 UPF2Q9HAU5 1272 aaKnown RBP5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 PTPN23Q9H3S7 1636 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 TIAM1Q13009 1591 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 BLMP54132 1417 aaPredicted RBP5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 ZMYM3Q14202 1370 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 DISP3Q9P2K9 1392 aa5.31□□□□□ -1.56
R3HDM1-206ENST00000429703 SIGLEC1Q9BZZ2 1709 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 HMGB1P09429 215 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 CREBRFQ8IUR6 639 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 C10orf67Q8IYJ2 551 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 ZNF579Q8NAF0 562 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 SLX1AQ9BQ83 275 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 AGLP35573 1532 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 SUGP1Q8IWZ8 645 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 SMC5Q8IY18 1101 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 KRT222Q8N1A0 295 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 ZNF142P52746 1687 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 EIF3AQ14152 1382 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 LRCH2Q5VUJ6 765 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 SRLQ86TD4 932 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 CABP2Q9NPB3 220 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 ARHGEF12Q9NZN5 1544 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 MTUS2Q5JR59 1369 aa5.3□□□□□ -1.56
R3HDM1-206ENST00000429703 TNNT3P45378 269 aaPredicted RBP5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 MFSD10Q14728 455 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 PPP2R5AQ15172 486 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 KRI1Q8N9T8 703 aaKnown RBP5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 TBC1D22AQ8WUA7 517 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 ARIH1Q9Y4X5 557 aaPredicted RBP5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 PTPRCP08575 1304 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 SKILP12757 684 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 TSHZ1Q6ZSZ6 1077 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 GPIHBP1Q8IV16 184 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 NEK11Q8NG66 645 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 KCNF1Q9H3M0 494 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 CDC42BPBQ9Y5S2 1711 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 PREX1Q8TCU6 1659 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 KIF14Q15058 1648 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 PITPNM1O00562 1244 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 MLLT3P42568 568 aaPredicted RBP5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 NUTM2GQ5VZR2 741 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 CHADLQ6NUI6 762 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 CCDC61Q9Y6R9 512 aa5.29□□□□□ -1.56
R3HDM1-206ENST00000429703 CCDC18Q5T9S5 1454 aa5.28□□□□□ -1.56
R3HDM1-206ENST00000429703 KIF3CO14782 793 aa5.28□□□□□ -1.56
R3HDM1-206ENST00000429703 SCP2P22307 547 aa5.28□□□□□ -1.56
R3HDM1-206ENST00000429703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.28□□□□□ -1.56
R3HDM1-206ENST00000429703 MKL1Q969V6 931 aa5.28□□□□□ -1.56
R3HDM1-206ENST00000429703 ZNF428Q96B54 188 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms