RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 PER1O15534 1290 aaPredicted RBP24.86■■□□□ 1.57
SSR4P1-202ENST00000429427 ACSBG1Q96GR2 724 aa24.86■■□□□ 1.57
SSR4P1-202ENST00000429427 PLSCR1O15162 318 aa24.84■■□□□ 1.57
SSR4P1-202ENST00000429427 PROM2Q8N271 834 aa24.84■■□□□ 1.57
SSR4P1-202ENST00000429427 DDX54Q8TDD1 881 aaKnown RBP24.84■■□□□ 1.57
SSR4P1-202ENST00000429427 KNSTRNQ9Y448 316 aa24.84■■□□□ 1.57
SSR4P1-202ENST00000429427 R3HDM1Q15032 1099 aaKnown RBP24.82■■□□□ 1.56
SSR4P1-202ENST00000429427 ZCRB1Q8TBF4 217 aaKnown RBP24.82■■□□□ 1.56
SSR4P1-202ENST00000429427 EIF4A2Q14240 407 aaKnown RBP24.81■■□□□ 1.56
SSR4P1-202ENST00000429427 MORC1Q86VD1 984 aa24.81■■□□□ 1.56
SSR4P1-202ENST00000429427 EYA1Q99502 592 aa24.81■■□□□ 1.56
SSR4P1-202ENST00000429427 RAPGEF4Q8WZA2 1011 aa24.79■■□□□ 1.56
SSR4P1-202ENST00000429427 BTAF1O14981 1849 aa24.79■■□□□ 1.56
SSR4P1-202ENST00000429427 DOT1LQ8TEK3 1739 aa24.78■■□□□ 1.56
SSR4P1-202ENST00000429427 PKD1L3Q7Z443 1732 aa24.77■■□□□ 1.56
SSR4P1-202ENST00000429427 TATP17735 454 aaPredicted RBP24.76■■□□□ 1.55
SSR4P1-202ENST00000429427 ANO8Q9HCE9 1232 aaPredicted RBP24.76■■□□□ 1.55
SSR4P1-202ENST00000429427 CYP27B1O15528 508 aa24.74■■□□□ 1.55
SSR4P1-202ENST00000429427 TXNRD1Q16881 649 aa24.74■■□□□ 1.55
SSR4P1-202ENST00000429427 IGSF1Q8N6C5 1336 aa24.73■■□□□ 1.55
SSR4P1-202ENST00000429427 LRP5O75197 1615 aa24.72■■□□□ 1.55
SSR4P1-202ENST00000429427 PRIM1P49642 420 aaKnown RBP24.72■■□□□ 1.55
SSR4P1-202ENST00000429427 CC2D1BQ5T0F9 858 aaKnown RBP24.72■■□□□ 1.55
SSR4P1-202ENST00000429427 PCDH11XQ9BZA7 1347 aa24.71■■□□□ 1.55
SSR4P1-202ENST00000429427 PCDH11YQ9BZA8 1340 aa24.71■■□□□ 1.55
SSR4P1-202ENST00000429427 NPC1L1Q9UHC9 1359 aa24.7■■□□□ 1.55
SSR4P1-202ENST00000429427 TOGARAM1Q9Y4F4 1720 aa24.7■■□□□ 1.54
SSR4P1-202ENST00000429427 PAPPAQ13219 1627 aa24.7■■□□□ 1.54
SSR4P1-202ENST00000429427 NBPF14Q5TI25 921 aa24.68■■□□□ 1.54
SSR4P1-202ENST00000429427 KAT6BQ8WYB5 2073 aa24.68■■□□□ 1.54
SSR4P1-202ENST00000429427 SYTL4Q96C24 671 aaPredicted RBP24.67■■□□□ 1.54
SSR4P1-202ENST00000429427 LRRC4BQ9NT99 713 aa24.67■■□□□ 1.54
SSR4P1-202ENST00000429427 IL13P35225 146 aa24.66■■□□□ 1.54
SSR4P1-202ENST00000429427 AEBP1Q8IUX7 1158 aa24.66■■□□□ 1.54
SSR4P1-202ENST00000429427 MTHFSP49914 203 aa24.65■■□□□ 1.54
SSR4P1-202ENST00000429427 PDGFDQ9GZP0 370 aaPredicted RBP24.64■■□□□ 1.54
SSR4P1-202ENST00000429427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.64■■□□□ 1.54
SSR4P1-202ENST00000429427 CASZ1Q86V15 1759 aa24.63■■□□□ 1.53
SSR4P1-202ENST00000429427 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
SSR4P1-202ENST00000429427 NKX1-1Q15270 411 aaPredicted RBP24.63■■□□□ 1.53
SSR4P1-202ENST00000429427 LY75O60449 1722 aa24.62■■□□□ 1.53
SSR4P1-202ENST00000429427 SPG7Q9UQ90 795 aa24.62■■□□□ 1.53
SSR4P1-202ENST00000429427 KDRP35968 1356 aa24.62■■□□□ 1.53
SSR4P1-202ENST00000429427 PLEKHG2Q9H7P9 1386 aa24.62■■□□□ 1.53
SSR4P1-202ENST00000429427 COL3A1P02461 1466 aaPredicted RBP24.61■■□□□ 1.53
SSR4P1-202ENST00000429427 KCNQ4P56696 695 aa24.6■■□□□ 1.53
SSR4P1-202ENST00000429427 PHKG2P15735 406 aa24.59■■□□□ 1.53
SSR4P1-202ENST00000429427 SLC15A2Q16348 729 aa24.59■■□□□ 1.53
SSR4P1-202ENST00000429427 ZNF827Q17R98 1081 aa24.59■■□□□ 1.53
SSR4P1-202ENST00000429427 ITGB4P16144 1822 aa24.58■■□□□ 1.53
SSR4P1-202ENST00000429427 SULT6B1Q6IMI4 303 aa24.57■■□□□ 1.52
SSR4P1-202ENST00000429427 STK32BQ9NY57 414 aa24.56■■□□□ 1.52
SSR4P1-202ENST00000429427 SLC27A3Q5K4L6 730 aa24.55■■□□□ 1.52
SSR4P1-202ENST00000429427 MPRIPQ6WCQ1 1025 aa24.55■■□□□ 1.52
SSR4P1-202ENST00000429427 IFNL2Q8IZJ0 200 aa24.55■■□□□ 1.52
SSR4P1-202ENST00000429427 PIGBQ92521 554 aa24.55■■□□□ 1.52
SSR4P1-202ENST00000429427 AKT1S1Q96B36 256 aa24.54■■□□□ 1.52
SSR4P1-202ENST00000429427 KDM6AO15550 1401 aaPredicted RBP24.53■■□□□ 1.52
SSR4P1-202ENST00000429427 PALLDQ8WX93 1383 aa24.52■■□□□ 1.52
SSR4P1-202ENST00000429427 CCNL1Q9UK58 526 aaPredicted RBP24.51■■□□□ 1.51
SSR4P1-202ENST00000429427 DIAPH1O60610 1272 aaKnown RBP24.5■■□□□ 1.51
SSR4P1-202ENST00000429427 PLEKHO1Q53GL0 409 aaPredicted RBP24.5■■□□□ 1.51
SSR4P1-202ENST00000429427 ZNF530Q6P9A1 599 aaPredicted RBP24.5■■□□□ 1.51
SSR4P1-202ENST00000429427 TUBGCP6Q96RT7 1819 aa24.49■■□□□ 1.51
SSR4P1-202ENST00000429427 HMOX1P09601 288 aa24.49■■□□□ 1.51
SSR4P1-202ENST00000429427 ZBTB7AO95365 584 aa24.48■■□□□ 1.51
SSR4P1-202ENST00000429427 AMOTQ4VCS5 1084 aa24.48■■□□□ 1.51
SSR4P1-202ENST00000429427 PPP2R1AP30153 589 aa24.47■■□□□ 1.51
SSR4P1-202ENST00000429427 SPON1Q9HCB6 807 aa24.46■■□□□ 1.51
SSR4P1-202ENST00000429427 TMOD3Q9NYL9 352 aa24.46■■□□□ 1.51
SSR4P1-202ENST00000429427 ASAP1Q9ULH1 1129 aa24.46■■□□□ 1.51
SSR4P1-202ENST00000429427 QSER1Q2KHR3 1735 aa24.46■■□□□ 1.51
SSR4P1-202ENST00000429427 C5P01031 1676 aa24.46■■□□□ 1.51
SSR4P1-202ENST00000429427 PNPLA7Q6ZV29 1317 aa24.45■■□□□ 1.5
SSR4P1-202ENST00000429427 PTGER2P43116 358 aa24.45■■□□□ 1.5
SSR4P1-202ENST00000429427 DCAF5Q96JK2 942 aa24.45■■□□□ 1.5
SSR4P1-202ENST00000429427 TAF1LQ8IZX4 1826 aa24.44■■□□□ 1.5
SSR4P1-202ENST00000429427 ATG3Q9NT62 314 aa24.43■■□□□ 1.5
SSR4P1-202ENST00000429427 ERVV-2B6SEH9 535 aa24.42■■□□□ 1.5
SSR4P1-202ENST00000429427 HSP90AB1P08238 724 aaKnown RBP24.42■■□□□ 1.5
SSR4P1-202ENST00000429427 SMARCC1Q92922 1105 aaPredicted RBP24.42■■□□□ 1.5
SSR4P1-202ENST00000429427 SGIP1Q9BQI5 828 aa24.42■■□□□ 1.5
SSR4P1-202ENST00000429427 ATF5Q9Y2D1 282 aaPredicted RBP24.42■■□□□ 1.5
SSR4P1-202ENST00000429427 C1orf141Q5JVX7 400 aa24.4■■□□□ 1.5
SSR4P1-202ENST00000429427 AMIGO3Q86WK7 504 aa24.4■■□□□ 1.5
SSR4P1-202ENST00000429427 MTFR1LQ9H019 292 aa24.4■■□□□ 1.5
SSR4P1-202ENST00000429427 LOC102724428A0A0B4J2F2 783 aa24.39■■□□□ 1.49
SSR4P1-202ENST00000429427 U2SURPO15042 1029 aaKnown RBP24.39■■□□□ 1.49
SSR4P1-202ENST00000429427 SIK1P57059 783 aa24.39■■□□□ 1.49
SSR4P1-202ENST00000429427 MTHFSDQ2M296 383 aaKnown RBP24.39■■□□□ 1.49
SSR4P1-202ENST00000429427 TFCP2L1Q9NZI6 479 aa24.39■■□□□ 1.49
SSR4P1-202ENST00000429427 C4BP0C0L5 1744 aa24.38■■□□□ 1.49
SSR4P1-202ENST00000429427 ITPK1Q13572 414 aa24.38■■□□□ 1.49
SSR4P1-202ENST00000429427 SLC4A9Q96Q91 983 aa24.38■■□□□ 1.49
SSR4P1-202ENST00000429427 SCN11AQ9UI33 1791 aa24.38■■□□□ 1.49
SSR4P1-202ENST00000429427 ADAMTS7Q9UKP4 1686 aa24.37■■□□□ 1.49
SSR4P1-202ENST00000429427 AKAP4Q5JQC9 854 aa24.37■■□□□ 1.49
SSR4P1-202ENST00000429427 LINC00116Q8NCU8 138 aa24.37■■□□□ 1.49
SSR4P1-202ENST00000429427 LGR6Q9HBX8 967 aa24.36■■□□□ 1.49
SSR4P1-202ENST00000429427 MRC1P22897 1456 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms