RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 TDO2P48775 406 aa15.06■□□□□ 0
LDB3-205ENST00000429277 ATP2B2Q01814 1243 aa15.06■□□□□ 0
LDB3-205ENST00000429277 STARD3NLO95772 234 aa15.06■□□□□ 0
LDB3-205ENST00000429277 CALRP27797 417 aaKnown RBP15.06■□□□□ 0
LDB3-205ENST00000429277 AXDND1Q5T1B0 1012 aaPredicted RBP15.05■□□□□ 0
LDB3-205ENST00000429277 IMMTQ16891 758 aaKnown RBP15.05■□□□□ -0
LDB3-205ENST00000429277 SPATA32Q96LK8 384 aa15.05■□□□□ -0
LDB3-205ENST00000429277 DNAI2Q9GZS0 605 aa15.05■□□□□ -0
LDB3-205ENST00000429277 ZNF652Q9Y2D9 606 aa15.05■□□□□ -0
LDB3-205ENST00000429277 GOLGA6L7A0A1B0GV03 622 aa15.05■□□□□ -0
LDB3-205ENST00000429277 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ -0
LDB3-205ENST00000429277 SIL1Q9H173 461 aa15.05■□□□□ -0
LDB3-205ENST00000429277 POLA1P09884 1462 aaPredicted RBP15.05■□□□□ -0
LDB3-205ENST00000429277 NUP133Q8WUM0 1156 aa15.05■□□□□ -0
LDB3-205ENST00000429277 CCDC141Q6ZP82 1450 aa15.05■□□□□ -0
LDB3-205ENST00000429277 TANGO6Q9C0B7 1094 aa15.04■□□□□ -0
LDB3-205ENST00000429277 TMOD2Q9NZR1 351 aa15.04■□□□□ -0
LDB3-205ENST00000429277 CCDC61Q9Y6R9 512 aa15.04■□□□□ -0
LDB3-205ENST00000429277 GNAT3A8MTJ3 354 aa15.04■□□□□ -0
LDB3-205ENST00000429277 TRIM21P19474 475 aaKnown RBP15.04■□□□□ -0
LDB3-205ENST00000429277 CEBPZQ03701 1054 aaKnown RBP15.04■□□□□ -0
LDB3-205ENST00000429277 CCDC112Q8NEF3 446 aa15.04■□□□□ -0
LDB3-205ENST00000429277 BCAR3O75815 825 aa15.04■□□□□ -0
LDB3-205ENST00000429277 NEFHP12036 1026 aa15.04■□□□□ -0
LDB3-205ENST00000429277 KIF1BPQ96EK5 621 aa15.04■□□□□ -0
LDB3-205ENST00000429277 BACH2Q9BYV9 841 aa15.04■□□□□ -0
LDB3-205ENST00000429277 ARAP1Q96P48 1450 aa15.04■□□□□ -0
LDB3-205ENST00000429277 FKBP4Q02790 459 aaKnown RBP eCLIP15.03■□□□□ -0
LDB3-205ENST00000429277 SEPT7Q16181 437 aaKnown RBP15.03■□□□□ -0
LDB3-205ENST00000429277 NUP62CLQ9H1M0 184 aa15.03■□□□□ -0
LDB3-205ENST00000429277 KDM4AO75164 1064 aa15.03■□□□□ -0
LDB3-205ENST00000429277 GLRX3O76003 335 aaKnown RBP15.03■□□□□ -0
LDB3-205ENST00000429277 RAI14Q9P0K7 980 aa15.03■□□□□ -0
LDB3-205ENST00000429277 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
LDB3-205ENST00000429277 STK3Q13188 491 aa15.02■□□□□ -0
LDB3-205ENST00000429277 JAKMIP1Q96N16 626 aaKnown RBP15.02■□□□□ -0
LDB3-205ENST00000429277 ZHX3Q9H4I2 956 aa15.02■□□□□ -0
LDB3-205ENST00000429277 MYL6BP14649 208 aa15.02■□□□□ -0
LDB3-205ENST00000429277 IL27Q8NEV9 243 aa15.02■□□□□ -0
LDB3-205ENST00000429277 LRP2BPQ9P2M1 347 aa15.02■□□□□ -0
LDB3-205ENST00000429277 FBXO3Q9UK99 471 aa15.02■□□□□ -0
LDB3-205ENST00000429277 CCDC196A0A1B0GTZ2 297 aa15.02□□□□□ -0.01
LDB3-205ENST00000429277 KIF2AO00139 706 aaPredicted RBP15.02□□□□□ -0.01
LDB3-205ENST00000429277 PPP1R12BO60237 982 aaPredicted RBP15.02□□□□□ -0.01
LDB3-205ENST00000429277 ALDH1L2Q3SY69 923 aa15.02□□□□□ -0.01
LDB3-205ENST00000429277 TSPYL1Q9H0U9 437 aa15.02□□□□□ -0.01
LDB3-205ENST00000429277 AMOTQ4VCS5 1084 aa15.02□□□□□ -0.01
LDB3-205ENST00000429277 LARP1Q6PKG0 1096 aaKnown RBP15.02□□□□□ -0.01
LDB3-205ENST00000429277 AIDAQ96BJ3 306 aa15.01□□□□□ -0.01
LDB3-205ENST00000429277 PHAXQ9H814 394 aaKnown RBP15.01□□□□□ -0.01
LDB3-205ENST00000429277 POTEJP0CG39 1038 aa15.01□□□□□ -0.01
LDB3-205ENST00000429277 EZRP15311 586 aaKnown RBP15.01□□□□□ -0.01
LDB3-205ENST00000429277 UPF3BQ9BZI7 483 aaKnown RBP15.01□□□□□ -0.01
LDB3-205ENST00000429277 SUPT6HQ7KZ85 1726 aaKnown RBP15.01□□□□□ -0.01
LDB3-205ENST00000429277 PLEKHH1Q9ULM0 1364 aa15.01□□□□□ -0.01
LDB3-205ENST00000429277 RBM5P52756 815 aaKnown RBP eCLIP15.01□□□□□ -0.01
LDB3-205ENST00000429277 CETN2P41208 172 aa15□□□□□ -0.01
LDB3-205ENST00000429277 TNIP1Q15025 636 aa15□□□□□ -0.01
LDB3-205ENST00000429277 HSP90AB3PQ58FF7 597 aa15□□□□□ -0.01
LDB3-205ENST00000429277 HMGB1P09429 215 aaKnown RBP15□□□□□ -0.01
LDB3-205ENST00000429277 MPHOSPH10O00566 681 aaKnown RBP15□□□□□ -0.01
LDB3-205ENST00000429277 KIAA0754O94854 1291 aa14.99□□□□□ -0.01
LDB3-205ENST00000429277 ZNF76P36508 570 aa14.99□□□□□ -0.01
LDB3-205ENST00000429277 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
LDB3-205ENST00000429277 JAKMIP3Q5VZ66 844 aa14.99□□□□□ -0.01
LDB3-205ENST00000429277 IFIT1P09914 478 aaKnown RBP14.99□□□□□ -0.01
LDB3-205ENST00000429277 ZNF397Q8NF99 534 aaPredicted RBP14.99□□□□□ -0.01
LDB3-205ENST00000429277 ZSCAN29Q8IWY8 852 aaPredicted RBP14.99□□□□□ -0.01
LDB3-205ENST00000429277 SH2B1Q9NRF2 756 aaPredicted RBP14.99□□□□□ -0.01
LDB3-205ENST00000429277 NUDT16Q96DE0 195 aaKnown RBP14.99□□□□□ -0.01
LDB3-205ENST00000429277 SPC24Q8NBT2 197 aa14.98□□□□□ -0.01
LDB3-205ENST00000429277 TAF4BQ92750 862 aa14.98□□□□□ -0.01
LDB3-205ENST00000429277 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
LDB3-205ENST00000429277 NBPF8Q3BBV2 869 aa14.98□□□□□ -0.01
LDB3-205ENST00000429277 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
LDB3-205ENST00000429277 GRPEL1Q9HAV7 217 aa14.98□□□□□ -0.01
LDB3-205ENST00000429277 CAVIN4Q5BKX8 364 aa14.98□□□□□ -0.01
LDB3-205ENST00000429277 SLFN5Q08AF3 891 aa14.98□□□□□ -0.01
LDB3-205ENST00000429277 GBP3Q9H0R5 595 aa14.98□□□□□ -0.01
LDB3-205ENST00000429277 MAP3K11Q16584 847 aa14.97□□□□□ -0.01
LDB3-205ENST00000429277 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
LDB3-205ENST00000429277 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
LDB3-205ENST00000429277 EPB41L2O43491 1005 aaKnown RBP14.97□□□□□ -0.01
LDB3-205ENST00000429277 SCAND2PQ9GZW5 306 aaPredicted RBP14.97□□□□□ -0.01
LDB3-205ENST00000429277 SEC63Q9UGP8 760 aaKnown RBP14.97□□□□□ -0.01
LDB3-205ENST00000429277 KIF20AO95235 890 aa14.97□□□□□ -0.01
LDB3-205ENST00000429277 METTL24Q5JXM2 366 aa14.97□□□□□ -0.01
LDB3-205ENST00000429277 RAB34Q9BZG1 259 aa14.97□□□□□ -0.01
LDB3-205ENST00000429277 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
LDB3-205ENST00000429277 IDH1O75874 414 aaKnown RBP14.96□□□□□ -0.01
LDB3-205ENST00000429277 SSBP05455 408 aaKnown RBP eCLIP14.96□□□□□ -0.01
LDB3-205ENST00000429277 EIF5P55010 431 aaKnown RBP14.96□□□□□ -0.01
LDB3-205ENST00000429277 SLF2Q8IX21 1173 aa14.96□□□□□ -0.01
LDB3-205ENST00000429277 PDCL2Q8N4E4 241 aa14.96□□□□□ -0.01
LDB3-205ENST00000429277 FGFR1OPO95684 399 aaKnown RBP14.96□□□□□ -0.02
LDB3-205ENST00000429277 MX1P20591 662 aa14.96□□□□□ -0.02
LDB3-205ENST00000429277 CCDC148Q8NFR7 591 aa14.95□□□□□ -0.02
LDB3-205ENST00000429277 RNF41Q9H4P4 317 aaPredicted RBP14.95□□□□□ -0.02
LDB3-205ENST00000429277 DUSP27Q5VZP5 1158 aa14.95□□□□□ -0.02
LDB3-205ENST00000429277 GBP2P32456 591 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms