RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MSH6P52701 1360 aa15.25■□□□□ 0.03
CDH3-202ENST00000429102 FAM177BA6PVY3 158 aa15.25■□□□□ 0.03
CDH3-202ENST00000429102 WASLO00401 505 aaPredicted RBP15.25■□□□□ 0.03
CDH3-202ENST00000429102 ZSCAN30Q86W11 494 aa15.25■□□□□ 0.03
CDH3-202ENST00000429102 ANKRD44Q8N8A2 993 aa15.25■□□□□ 0.03
CDH3-202ENST00000429102 TMEM63CQ9P1W3 806 aa15.25■□□□□ 0.03
CDH3-202ENST00000429102 ERC2O15083 957 aa15.25■□□□□ 0.03
CDH3-202ENST00000429102 ABCC4O15439 1325 aa15.25■□□□□ 0.03
CDH3-202ENST00000429102 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
CDH3-202ENST00000429102 REC8O95072 547 aa15.24■□□□□ 0.03
CDH3-202ENST00000429102 ANXA1P04083 346 aa15.24■□□□□ 0.03
CDH3-202ENST00000429102 RBM33Q96EV2 1170 aaKnown RBP15.24■□□□□ 0.03
CDH3-202ENST00000429102 ADGRB1O14514 1584 aa15.24■□□□□ 0.03
CDH3-202ENST00000429102 CPA1P15085 419 aa15.24■□□□□ 0.03
CDH3-202ENST00000429102 TMX3Q96JJ7 454 aa15.24■□□□□ 0.03
CDH3-202ENST00000429102 AMPHP49418 695 aa15.24■□□□□ 0.03
CDH3-202ENST00000429102 USHBP1Q8N6Y0 703 aa15.24■□□□□ 0.03
CDH3-202ENST00000429102 TSC1Q92574 1164 aa15.24■□□□□ 0.03
CDH3-202ENST00000429102 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
CDH3-202ENST00000429102 STK31Q9BXU1 1019 aa15.23■□□□□ 0.03
CDH3-202ENST00000429102 ZDHHC9Q9Y397 364 aa15.23■□□□□ 0.03
CDH3-202ENST00000429102 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
CDH3-202ENST00000429102 C17orf53Q8N3J3 647 aaPredicted RBP15.23■□□□□ 0.03
CDH3-202ENST00000429102 YEATS2Q9ULM3 1422 aa15.23■□□□□ 0.03
CDH3-202ENST00000429102 SHROOM2Q13796 1616 aa15.23■□□□□ 0.03
CDH3-202ENST00000429102 PNMA6EA0A0J9YXQ4 647 aa15.22■□□□□ 0.03
CDH3-202ENST00000429102 PDE1AP54750 535 aa15.22■□□□□ 0.03
CDH3-202ENST00000429102 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
CDH3-202ENST00000429102 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
CDH3-202ENST00000429102 HMMRO75330 724 aa15.22■□□□□ 0.03
CDH3-202ENST00000429102 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
CDH3-202ENST00000429102 GLI2P10070 1586 aa15.21■□□□□ 0.03
CDH3-202ENST00000429102 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.03
CDH3-202ENST00000429102 GADD45BO75293 160 aaPredicted RBP15.21■□□□□ 0.03
CDH3-202ENST00000429102 OS9Q13438 667 aaPredicted RBP15.21■□□□□ 0.03
CDH3-202ENST00000429102 ZNF853P0CG23 659 aa15.21■□□□□ 0.03
CDH3-202ENST00000429102 RPAP2Q8IXW5 612 aaPredicted RBP15.21■□□□□ 0.02
CDH3-202ENST00000429102 LRRFIP2Q9Y608 721 aaKnown RBP15.21■□□□□ 0.02
CDH3-202ENST00000429102 NGDNQ8NEJ9 315 aaKnown RBP15.2■□□□□ 0.02
CDH3-202ENST00000429102 ADGRB3O60242 1522 aa15.2■□□□□ 0.02
CDH3-202ENST00000429102 MTHFSDQ2M296 383 aaKnown RBP15.2■□□□□ 0.02
CDH3-202ENST00000429102 MROH1Q8NDA8 1641 aa15.2■□□□□ 0.02
CDH3-202ENST00000429102 SURF6O75683 361 aaKnown RBP15.19■□□□□ 0.02
CDH3-202ENST00000429102 FIBPO43427 364 aa15.19■□□□□ 0.02
CDH3-202ENST00000429102 CCDC9Q9Y3X0 531 aaKnown RBP15.19■□□□□ 0.02
CDH3-202ENST00000429102 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
CDH3-202ENST00000429102 SPG7Q9UQ90 795 aa15.18■□□□□ 0.02
CDH3-202ENST00000429102 NRXN1Q9ULB1 1477 aa15.18■□□□□ 0.02
CDH3-202ENST00000429102 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
CDH3-202ENST00000429102 GNAI2P04899 355 aa15.18■□□□□ 0.02
CDH3-202ENST00000429102 PUS7Q96PZ0 661 aaKnown RBP15.18■□□□□ 0.02
CDH3-202ENST00000429102 UQCRHLA0A096LP55 91 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 UQCRHP07919 91 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 LRRCC1Q9C099 1032 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 PRDM10Q9NQV6 1147 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 ZMYM3Q14202 1370 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 MX1P20591 662 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 PTMSP20962 102 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 MCCP23508 829 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 LMOD2Q6P5Q4 547 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
CDH3-202ENST00000429102 IL25Q9H293 177 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 FAM135BQ49AJ0 1406 aa15.17■□□□□ 0.02
CDH3-202ENST00000429102 RRP9O43818 475 aaKnown RBP15.17■□□□□ 0.02
CDH3-202ENST00000429102 USP25Q9UHP3 1055 aa15.16■□□□□ 0.02
CDH3-202ENST00000429102 ACEP12821 1306 aa15.16■□□□□ 0.02
CDH3-202ENST00000429102 RTL1A6NKG5 1358 aa15.16■□□□□ 0.02
CDH3-202ENST00000429102 UHRF1BP1LA0JNW5 1464 aa15.16■□□□□ 0.02
CDH3-202ENST00000429102 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
CDH3-202ENST00000429102 INO80Q9ULG1 1556 aaPredicted RBP15.16■□□□□ 0.02
CDH3-202ENST00000429102 CD163L1Q9NR16 1453 aa15.16■□□□□ 0.02
CDH3-202ENST00000429102 NCOA3Q9Y6Q9 1424 aa15.16■□□□□ 0.02
CDH3-202ENST00000429102 PHAXQ9H814 394 aaKnown RBP15.16■□□□□ 0.02
CDH3-202ENST00000429102 ISY1Q9ULR0 285 aaKnown RBP15.16■□□□□ 0.02
CDH3-202ENST00000429102 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
CDH3-202ENST00000429102 TCEANC2Q96MN5 208 aa15.15■□□□□ 0.02
CDH3-202ENST00000429102 PNPLA6Q8IY17 1366 aa15.15■□□□□ 0.02
CDH3-202ENST00000429102 CHL1O00533 1208 aa15.15■□□□□ 0.02
CDH3-202ENST00000429102 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
CDH3-202ENST00000429102 COL3A1P02461 1466 aaPredicted RBP15.15■□□□□ 0.02
CDH3-202ENST00000429102 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
CDH3-202ENST00000429102 SPC24Q8NBT2 197 aa15.15■□□□□ 0.02
CDH3-202ENST00000429102 TTC12Q9H892 705 aaPredicted RBP15.15■□□□□ 0.02
CDH3-202ENST00000429102 KCNJ4P48050 445 aa15.14■□□□□ 0.01
CDH3-202ENST00000429102 FLIIQ13045 1269 aa15.14■□□□□ 0.01
CDH3-202ENST00000429102 ESYT1Q9BSJ8 1104 aa15.14■□□□□ 0.01
CDH3-202ENST00000429102 METP08581 1390 aa15.14■□□□□ 0.01
CDH3-202ENST00000429102 NLRP6P59044 892 aa15.14■□□□□ 0.01
CDH3-202ENST00000429102 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
CDH3-202ENST00000429102 CWC22Q9HCG8 908 aaKnown RBP15.14■□□□□ 0.01
CDH3-202ENST00000429102 CNPY2Q9Y2B0 182 aa15.14■□□□□ 0.01
CDH3-202ENST00000429102 ABCC3O15438 1527 aa15.14■□□□□ 0.01
CDH3-202ENST00000429102 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
CDH3-202ENST00000429102 PPFIA3O75145 1194 aa15.13■□□□□ 0.01
CDH3-202ENST00000429102 USP48Q86UV5 1035 aa15.13■□□□□ 0.01
CDH3-202ENST00000429102 MAP3K19Q56UN5 1328 aa15.13■□□□□ 0.01
CDH3-202ENST00000429102 PRR36Q9H6K5 1346 aa15.13■□□□□ 0.01
CDH3-202ENST00000429102 VIRMAQ69YN4 1812 aaKnown RBP15.13■□□□□ 0.01
CDH3-202ENST00000429102 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
CDH3-202ENST00000429102 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms