RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 NBPF6Q5VWK0 638 aa14.75□□□□□ -0.05
CECR3-201ENST00000428828 AEBP1Q8IUX7 1158 aa14.75□□□□□ -0.05
CECR3-201ENST00000428828 CCDC146Q8IYE0 955 aa14.75□□□□□ -0.05
CECR3-201ENST00000428828 NBPF4Q96M43 638 aa14.75□□□□□ -0.05
CECR3-201ENST00000428828 SLIT2O94813 1529 aa14.75□□□□□ -0.05
CECR3-201ENST00000428828 SULT6B1Q6IMI4 303 aa14.74□□□□□ -0.05
CECR3-201ENST00000428828 TOM1L2Q6ZVM7 507 aa14.74□□□□□ -0.05
CECR3-201ENST00000428828 DDRGK1Q96HY6 314 aa14.74□□□□□ -0.05
CECR3-201ENST00000428828 WDR17Q8IZU2 1322 aa14.74□□□□□ -0.05
CECR3-201ENST00000428828 LARP1Q6PKG0 1096 aaKnown RBP14.74□□□□□ -0.05
CECR3-201ENST00000428828 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
CECR3-201ENST00000428828 IGSF1Q8N6C5 1336 aa14.74□□□□□ -0.05
CECR3-201ENST00000428828 PARP4Q9UKK3 1724 aaKnown RBP14.72□□□□□ -0.05
CECR3-201ENST00000428828 CCDC9Q9Y3X0 531 aaKnown RBP14.72□□□□□ -0.05
CECR3-201ENST00000428828 AFF2P51816 1311 aa14.72□□□□□ -0.05
CECR3-201ENST00000428828 CRB1P82279 1406 aa14.71□□□□□ -0.05
CECR3-201ENST00000428828 PRKAR2BP31323 418 aa14.71□□□□□ -0.05
CECR3-201ENST00000428828 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.05
CECR3-201ENST00000428828 BCL9LQ86UU0 1499 aa14.71□□□□□ -0.05
CECR3-201ENST00000428828 ILDR1Q86SU0 546 aaPredicted RBP14.7□□□□□ -0.06
CECR3-201ENST00000428828 USP21Q9UK80 565 aa14.7□□□□□ -0.06
CECR3-201ENST00000428828 ZMYND15Q9H091 742 aa14.7□□□□□ -0.06
CECR3-201ENST00000428828 UNC5CLQ8IV45 518 aa14.69□□□□□ -0.06
CECR3-201ENST00000428828 KDRP35968 1356 aa14.68□□□□□ -0.06
CECR3-201ENST00000428828 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
CECR3-201ENST00000428828 NCAPD2Q15021 1401 aa14.68□□□□□ -0.06
CECR3-201ENST00000428828 FCHSD2O94868 740 aa14.68□□□□□ -0.06
CECR3-201ENST00000428828 FNBP4Q8N3X1 1017 aaPredicted RBP14.68□□□□□ -0.06
CECR3-201ENST00000428828 BACH2Q9BYV9 841 aa14.68□□□□□ -0.06
CECR3-201ENST00000428828 MEGF6O75095 1541 aa14.67□□□□□ -0.06
CECR3-201ENST00000428828 CARD10Q9BWT7 1032 aa14.67□□□□□ -0.06
CECR3-201ENST00000428828 PKD1L3Q7Z443 1732 aa14.67□□□□□ -0.06
CECR3-201ENST00000428828 RRP9O43818 475 aaKnown RBP14.66□□□□□ -0.06
CECR3-201ENST00000428828 RUNDC1Q96C34 613 aa14.66□□□□□ -0.06
CECR3-201ENST00000428828 LAS1LQ9Y4W2 734 aaKnown RBP14.66□□□□□ -0.06
CECR3-201ENST00000428828 SHANK3Q9BYB0 1731 aa14.66□□□□□ -0.06
CECR3-201ENST00000428828 PHACTR3Q96KR7 559 aa14.66□□□□□ -0.06
CECR3-201ENST00000428828 PLEKHF1Q96S99 279 aa14.66□□□□□ -0.06
CECR3-201ENST00000428828 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
CECR3-201ENST00000428828 RRP7AQ9Y3A4 280 aaKnown RBP14.66□□□□□ -0.06
CECR3-201ENST00000428828 NEUROD2Q15784 382 aa14.65□□□□□ -0.06
CECR3-201ENST00000428828 RAPGEF4Q8WZA2 1011 aa14.65□□□□□ -0.06
CECR3-201ENST00000428828 GLI3P10071 1580 aa14.65□□□□□ -0.06
CECR3-201ENST00000428828 SPATA31A1Q5TZJ5 1347 aa14.65□□□□□ -0.06
CECR3-201ENST00000428828 APAF1O14727 1248 aa14.64□□□□□ -0.07
CECR3-201ENST00000428828 PDE4AP27815 886 aa14.64□□□□□ -0.07
CECR3-201ENST00000428828 PODXL2Q9NZ53 605 aa14.64□□□□□ -0.07
CECR3-201ENST00000428828 SPATA31A5Q5VU36 1347 aa14.64□□□□□ -0.07
CECR3-201ENST00000428828 SPATA31A7Q8IWB4 1347 aa14.64□□□□□ -0.07
CECR3-201ENST00000428828 TATP17735 454 aaPredicted RBP14.64□□□□□ -0.07
CECR3-201ENST00000428828 NFKBIBQ15653 356 aa14.64□□□□□ -0.07
CECR3-201ENST00000428828 TCP11L2Q8N4U5 519 aa14.64□□□□□ -0.07
CECR3-201ENST00000428828 FRAT1Q92837 279 aaPredicted RBP14.64□□□□□ -0.07
CECR3-201ENST00000428828 LRRC37A3O60309 1634 aa14.63□□□□□ -0.07
CECR3-201ENST00000428828 VPS72Q15906 364 aa14.63□□□□□ -0.07
CECR3-201ENST00000428828 IL2RBP14784 551 aa14.62□□□□□ -0.07
CECR3-201ENST00000428828 ATRNO75882 1429 aa14.62□□□□□ -0.07
CECR3-201ENST00000428828 OVOS2A0A0G2JMS6 1433 aa14.61□□□□□ -0.07
CECR3-201ENST00000428828 A0A0G2JS52 829 aa14.61□□□□□ -0.07
CECR3-201ENST00000428828 FAM98CQ17RN3 349 aaKnown RBP14.61□□□□□ -0.07
CECR3-201ENST00000428828 MTHFSDQ2M296 383 aaKnown RBP14.61□□□□□ -0.07
CECR3-201ENST00000428828 PHF23Q9BUL5 403 aaPredicted RBP14.61□□□□□ -0.07
CECR3-201ENST00000428828 TRPC5Q9UL62 973 aaPredicted RBP14.61□□□□□ -0.07
CECR3-201ENST00000428828 KAT6BQ8WYB5 2073 aa14.61□□□□□ -0.07
CECR3-201ENST00000428828 QTRT2Q9H974 415 aaKnown RBP14.6□□□□□ -0.07
CECR3-201ENST00000428828 DISP2A7MBM2 1401 aa14.6□□□□□ -0.07
CECR3-201ENST00000428828 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
CECR3-201ENST00000428828 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
CECR3-201ENST00000428828 RIPK4P57078 832 aa14.59□□□□□ -0.07
CECR3-201ENST00000428828 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
CECR3-201ENST00000428828 PLEKHO1Q53GL0 409 aaPredicted RBP14.59□□□□□ -0.07
CECR3-201ENST00000428828 ZNF772Q68DY9 489 aaPredicted RBP14.59□□□□□ -0.07
CECR3-201ENST00000428828 ZNF530Q6P9A1 599 aaPredicted RBP14.59□□□□□ -0.07
CECR3-201ENST00000428828 GJD4Q96KN9 370 aaPredicted RBP14.59□□□□□ -0.07
CECR3-201ENST00000428828 THSD7AQ9UPZ6 1657 aa14.59□□□□□ -0.07
CECR3-201ENST00000428828 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
CECR3-201ENST00000428828 SCN11AQ9UI33 1791 aa14.59□□□□□ -0.07
CECR3-201ENST00000428828 THRAP3Q9Y2W1 955 aaKnown RBP14.58□□□□□ -0.07
CECR3-201ENST00000428828 GAS2L2Q8NHY3 880 aa14.58□□□□□ -0.08
CECR3-201ENST00000428828 AMOTQ4VCS5 1084 aa14.57□□□□□ -0.08
CECR3-201ENST00000428828 SPG7Q9UQ90 795 aa14.57□□□□□ -0.08
CECR3-201ENST00000428828 BARGINQ6ZT62 677 aa14.56□□□□□ -0.08
CECR3-201ENST00000428828 ZCRB1Q8TBF4 217 aaKnown RBP14.56□□□□□ -0.08
CECR3-201ENST00000428828 TNS2Q63HR2 1409 aa14.56□□□□□ -0.08
CECR3-201ENST00000428828 C1orf141Q5JVX7 400 aa14.56□□□□□ -0.08
CECR3-201ENST00000428828 DDX54Q8TDD1 881 aaKnown RBP14.56□□□□□ -0.08
CECR3-201ENST00000428828 MAP3K5Q99683 1374 aa14.56□□□□□ -0.08
CECR3-201ENST00000428828 DCTN1Q14203 1278 aa14.55□□□□□ -0.08
CECR3-201ENST00000428828 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
CECR3-201ENST00000428828 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
CECR3-201ENST00000428828 DOT1LQ8TEK3 1739 aa14.55□□□□□ -0.08
CECR3-201ENST00000428828 TOGARAM1Q9Y4F4 1720 aa14.55□□□□□ -0.08
CECR3-201ENST00000428828 HSP90AA2PQ14568 343 aaPredicted RBP14.54□□□□□ -0.08
CECR3-201ENST00000428828 DDB1Q16531 1140 aa14.54□□□□□ -0.08
CECR3-201ENST00000428828 MCM10Q7L590 875 aa14.54□□□□□ -0.08
CECR3-201ENST00000428828 THUMPD2Q9BTF0 503 aaKnown RBP14.54□□□□□ -0.08
CECR3-201ENST00000428828 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
CECR3-201ENST00000428828 RGS17Q9UGC6 210 aaPredicted RBP14.54□□□□□ -0.08
CECR3-201ENST00000428828 ITGB4P16144 1822 aa14.54□□□□□ -0.08
CECR3-201ENST00000428828 GNAT3A8MTJ3 354 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms