RNA–Protein interactions for RNA: ENST00000428797.7

GABRA1-203, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-203ENST00000428797 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
GABRA1-203ENST00000428797 SHROOM2Q13796 1616 aa11.38□□□□□ -0.59
GABRA1-203ENST00000428797 ZBTB7BO15156 539 aaPredicted RBP11.38□□□□□ -0.59
GABRA1-203ENST00000428797 DCTN1Q14203 1278 aa11.37□□□□□ -0.59
GABRA1-203ENST00000428797 ANKRD1Q15327 319 aa11.37□□□□□ -0.59
GABRA1-203ENST00000428797 SF3A1Q15459 793 aaKnown RBP11.37□□□□□ -0.59
GABRA1-203ENST00000428797 SASS6Q6UVJ0 657 aa11.37□□□□□ -0.59
GABRA1-203ENST00000428797 PLEKHO1Q53GL0 409 aaPredicted RBP11.37□□□□□ -0.59
GABRA1-203ENST00000428797 CYP46A1Q9Y6A2 500 aa11.37□□□□□ -0.59
GABRA1-203ENST00000428797 GNAT3A8MTJ3 354 aa11.37□□□□□ -0.59
GABRA1-203ENST00000428797 MCM10Q7L590 875 aa11.37□□□□□ -0.59
GABRA1-203ENST00000428797 BICD2Q8TD16 824 aa11.36□□□□□ -0.59
GABRA1-203ENST00000428797 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
GABRA1-203ENST00000428797 KIF1BPQ96EK5 621 aa11.36□□□□□ -0.59
GABRA1-203ENST00000428797 TET3O43151 1660 aa11.36□□□□□ -0.59
GABRA1-203ENST00000428797 PSME1Q06323 249 aa11.36□□□□□ -0.59
GABRA1-203ENST00000428797 EXOC6BQ9Y2D4 811 aa11.36□□□□□ -0.59
GABRA1-203ENST00000428797 YTHDC2Q9H6S0 1430 aaKnown RBP11.35□□□□□ -0.59
GABRA1-203ENST00000428797 SMARCA5O60264 1052 aaPredicted RBP11.35□□□□□ -0.59
GABRA1-203ENST00000428797 ANAPC15P60006 121 aa11.35□□□□□ -0.59
GABRA1-203ENST00000428797 KIF24Q5T7B8 1368 aa11.35□□□□□ -0.59
GABRA1-203ENST00000428797 FBXO31Q5XUX0 539 aaPredicted RBP11.35□□□□□ -0.59
GABRA1-203ENST00000428797 ARAP3Q8WWN8 1544 aa11.35□□□□□ -0.59
GABRA1-203ENST00000428797 HS1BP3Q53T59 392 aa11.35□□□□□ -0.59
GABRA1-203ENST00000428797 ABTB2Q8N961 1025 aa11.35□□□□□ -0.59
GABRA1-203ENST00000428797 CCDC192P0DO97 292 aa11.35□□□□□ -0.59
GABRA1-203ENST00000428797 SDSP20132 328 aa11.35□□□□□ -0.59
GABRA1-203ENST00000428797 SRGAP3O43295 1099 aa11.34□□□□□ -0.59
GABRA1-203ENST00000428797 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
GABRA1-203ENST00000428797 C8orf58Q8NAV2 365 aa11.34□□□□□ -0.59
GABRA1-203ENST00000428797 SYCE3A1L190 88 aa11.34□□□□□ -0.59
GABRA1-203ENST00000428797 GLRX3O76003 335 aaKnown RBP11.34□□□□□ -0.59
GABRA1-203ENST00000428797 KRT85P78386 507 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 TAF7Q15545 349 aaPredicted RBP11.33□□□□□ -0.6
GABRA1-203ENST00000428797 TAF7LQ5H9L4 462 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 CCDC73Q6ZRK6 1079 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 FSD1Q9BTV5 496 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 KIF1BO60333 1816 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 FIBPO43427 364 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 NPATQ14207 1427 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 BRPF1P55201 1214 aaPredicted RBP11.33□□□□□ -0.6
GABRA1-203ENST00000428797 CPLX2Q6PUV4 134 aaKnown RBP11.33□□□□□ -0.6
GABRA1-203ENST00000428797 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
GABRA1-203ENST00000428797 ARID3AQ99856 593 aa11.33□□□□□ -0.6
GABRA1-203ENST00000428797 PANK2Q9BZ23 570 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 PPIP5K1Q6PFW1 1433 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 SH2B1Q9NRF2 756 aaPredicted RBP11.32□□□□□ -0.6
GABRA1-203ENST00000428797 FLIIQ13045 1269 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 UVSSAQ2YD98 709 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 CCDC183Q5T5S1 534 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 MADDQ8WXG6 1647 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 PDE1AP54750 535 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 ZSCAN23Q3MJ62 389 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 PDRG1Q9NUG6 133 aa11.32□□□□□ -0.6
GABRA1-203ENST00000428797 CDC42BPBQ9Y5S2 1711 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 FAM83GA6ND36 823 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 SOS1Q07889 1333 aaPredicted RBP11.31□□□□□ -0.6
GABRA1-203ENST00000428797 LRSAM1Q6UWE0 723 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 IL1RAPL2Q9NP60 686 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 MAP3K4Q9Y6R4 1608 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 EDC4Q6P2E9 1401 aaKnown RBP11.31□□□□□ -0.6
GABRA1-203ENST00000428797 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 NAT10Q9H0A0 1025 aaKnown RBP11.31□□□□□ -0.6
GABRA1-203ENST00000428797 ZFYVE16Q7Z3T8 1539 aa11.31□□□□□ -0.6
GABRA1-203ENST00000428797 TTC21AQ8NDW8 1320 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 KRT32Q14532 448 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 RAPGEF4Q8WZA2 1011 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 PLEKHF1Q96S99 279 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 PHF23Q9BUL5 403 aaPredicted RBP11.3□□□□□ -0.6
GABRA1-203ENST00000428797 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 DHX8Q14562 1220 aaKnown RBP11.3□□□□□ -0.6
GABRA1-203ENST00000428797 LARP1BQ659C4 914 aaKnown RBP11.3□□□□□ -0.6
GABRA1-203ENST00000428797 MEIS3Q99687 375 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 ANTXR1Q9H6X2 564 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 RIMS2Q9UQ26 1411 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 F6X3S4 739 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 PDCL3Q9H2J4 239 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 POGZQ7Z3K3 1410 aa11.3□□□□□ -0.6
GABRA1-203ENST00000428797 UQCRHLA0A096LP55 91 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 UQCRHP07919 91 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 IL13P35225 146 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 BLOC1S2Q6QNY1 142 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 INTS4Q96HW7 963 aaKnown RBP11.29□□□□□ -0.6
GABRA1-203ENST00000428797 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
GABRA1-203ENST00000428797 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
GABRA1-203ENST00000428797 NUTM2GQ5VZR2 741 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 JAKMIP1Q96N16 626 aaKnown RBP11.29□□□□□ -0.6
GABRA1-203ENST00000428797 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
GABRA1-203ENST00000428797 CLTCL1P53675 1640 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 PIK3R4Q99570 1358 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 ATP8B2P98198 1209 aa11.29□□□□□ -0.6
GABRA1-203ENST00000428797 ZNF530Q6P9A1 599 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms