RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 NSD2O96028 1365 aa21.66■■□□□ 1.06
SEC13-210ENST00000428626 ZNF827Q17R98 1081 aa21.66■■□□□ 1.06
SEC13-210ENST00000428626 ATF5Q9Y2D1 282 aaPredicted RBP21.66■■□□□ 1.06
SEC13-210ENST00000428626 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
SEC13-210ENST00000428626 ZCRB1Q8TBF4 217 aaKnown RBP21.65■■□□□ 1.06
SEC13-210ENST00000428626 PRIM1P49642 420 aaKnown RBP21.64■■□□□ 1.05
SEC13-210ENST00000428626 INSRP06213 1382 aa21.63■■□□□ 1.05
SEC13-210ENST00000428626 EMILIN1Q9Y6C2 1016 aa21.63■■□□□ 1.05
SEC13-210ENST00000428626 KCNQ4P56696 695 aa21.62■■□□□ 1.05
SEC13-210ENST00000428626 SGIP1Q9BQI5 828 aa21.62■■□□□ 1.05
SEC13-210ENST00000428626 FLT4P35916 1363 aa21.61■■□□□ 1.05
SEC13-210ENST00000428626 SYTL4Q96C24 671 aaPredicted RBP21.61■■□□□ 1.05
SEC13-210ENST00000428626 AKT1S1Q96B36 256 aa21.6■■□□□ 1.05
SEC13-210ENST00000428626 LY75O60449 1722 aa21.59■■□□□ 1.05
SEC13-210ENST00000428626 SMG6Q86US8 1419 aaKnown RBP21.59■■□□□ 1.05
SEC13-210ENST00000428626 MTFR1LQ9H019 292 aa21.59■■□□□ 1.05
SEC13-210ENST00000428626 KIF24Q5T7B8 1368 aa21.59■■□□□ 1.05
SEC13-210ENST00000428626 ANKRD26Q9UPS8 1709 aa21.58■■□□□ 1.04
SEC13-210ENST00000428626 TUBGCP6Q96RT7 1819 aa21.57■■□□□ 1.04
SEC13-210ENST00000428626 SLC27A3Q5K4L6 730 aa21.56■■□□□ 1.04
SEC13-210ENST00000428626 RAPGEF4Q8WZA2 1011 aa21.56■■□□□ 1.04
SEC13-210ENST00000428626 CGNL1Q0VF96 1302 aa21.55■■□□□ 1.04
SEC13-210ENST00000428626 TATP17735 454 aaPredicted RBP21.55■■□□□ 1.04
SEC13-210ENST00000428626 MAP2P11137 1827 aaKnown RBP21.55■■□□□ 1.04
SEC13-210ENST00000428626 NCAPD2Q15021 1401 aa21.55■■□□□ 1.04
SEC13-210ENST00000428626 FHDC1Q9C0D6 1143 aaPredicted RBP21.54■■□□□ 1.04
SEC13-210ENST00000428626 QSER1Q2KHR3 1735 aa21.54■■□□□ 1.04
SEC13-210ENST00000428626 PNPLA7Q6ZV29 1317 aa21.54■■□□□ 1.04
SEC13-210ENST00000428626 CYP27B1O15528 508 aa21.53■■□□□ 1.04
SEC13-210ENST00000428626 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
SEC13-210ENST00000428626 SYT17Q9BSW7 474 aa21.53■■□□□ 1.04
SEC13-210ENST00000428626 POLR3GLQ9BT43 218 aa21.53■■□□□ 1.04
SEC13-210ENST00000428626 TOGARAM1Q9Y4F4 1720 aa21.52■■□□□ 1.04
SEC13-210ENST00000428626 UTRNP46939 3433 aa21.52■■□□□ 1.04
SEC13-210ENST00000428626 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
SEC13-210ENST00000428626 PKD1L3Q7Z443 1732 aa21.52■■□□□ 1.03
SEC13-210ENST00000428626 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
SEC13-210ENST00000428626 WASHC2AQ641Q2 1341 aa21.51■■□□□ 1.03
SEC13-210ENST00000428626 PCDH11XQ9BZA7 1347 aa21.51■■□□□ 1.03
SEC13-210ENST00000428626 PCDH11YQ9BZA8 1340 aa21.51■■□□□ 1.03
SEC13-210ENST00000428626 COL24A1Q17RW2 1714 aa21.5■■□□□ 1.03
SEC13-210ENST00000428626 YY1P25490 414 aa21.5■■□□□ 1.03
SEC13-210ENST00000428626 EIF4G2P78344 907 aaKnown RBP eCLIP21.49■■□□□ 1.03
SEC13-210ENST00000428626 EYA1Q99502 592 aa21.49■■□□□ 1.03
SEC13-210ENST00000428626 CCNL1Q9UK58 526 aaPredicted RBP21.49■■□□□ 1.03
SEC13-210ENST00000428626 ARXQ96QS3 562 aa21.48■■□□□ 1.03
SEC13-210ENST00000428626 ITGB4P16144 1822 aa21.48■■□□□ 1.03
SEC13-210ENST00000428626 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
SEC13-210ENST00000428626 CCER1Q8TC90 406 aaPredicted RBP21.47■■□□□ 1.03
SEC13-210ENST00000428626 TFCP2L1Q9NZI6 479 aa21.47■■□□□ 1.03
SEC13-210ENST00000428626 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
SEC13-210ENST00000428626 SLC16A10Q8TF71 515 aa21.45■■□□□ 1.02
SEC13-210ENST00000428626 PANK3Q9H999 370 aa21.45■■□□□ 1.02
SEC13-210ENST00000428626 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
SEC13-210ENST00000428626 C5P01031 1676 aa21.44■■□□□ 1.02
SEC13-210ENST00000428626 TAF1LQ8IZX4 1826 aa21.43■■□□□ 1.02
SEC13-210ENST00000428626 EIF4A2Q14240 407 aaKnown RBP21.43■■□□□ 1.02
SEC13-210ENST00000428626 COL23A1Q86Y22 540 aaPredicted RBP21.43■■□□□ 1.02
SEC13-210ENST00000428626 PALLDQ8WX93 1383 aa21.43■■□□□ 1.02
SEC13-210ENST00000428626 DCAF8L1A6NGE4 600 aa21.42■■□□□ 1.02
SEC13-210ENST00000428626 NKX1-1Q15270 411 aaPredicted RBP21.42■■□□□ 1.02
SEC13-210ENST00000428626 PIGBQ92521 554 aa21.41■■□□□ 1.02
SEC13-210ENST00000428626 AMIGO3Q86WK7 504 aa21.4■■□□□ 1.02
SEC13-210ENST00000428626 SPG7Q9UQ90 795 aa21.39■■□□□ 1.01
SEC13-210ENST00000428626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.38■■□□□ 1.01
SEC13-210ENST00000428626 PHKG2P15735 406 aa21.37■■□□□ 1.01
SEC13-210ENST00000428626 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
SEC13-210ENST00000428626 IGSF1Q8N6C5 1336 aa21.36■■□□□ 1.01
SEC13-210ENST00000428626 C4BP0C0L5 1744 aa21.36■■□□□ 1.01
SEC13-210ENST00000428626 POLD1P28340 1107 aa21.36■■□□□ 1.01
SEC13-210ENST00000428626 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
SEC13-210ENST00000428626 MSH5O43196 834 aa21.35■■□□□ 1.01
SEC13-210ENST00000428626 MSL1Q68DK7 614 aa21.35■■□□□ 1.01
SEC13-210ENST00000428626 NLGN2Q8NFZ4 835 aa21.35■■□□□ 1.01
SEC13-210ENST00000428626 GOLGB1Q14789 3259 aaKnown RBP21.35■■□□□ 1.01
SEC13-210ENST00000428626 SMARCC1Q92922 1105 aaPredicted RBP21.34■■□□□ 1.01
SEC13-210ENST00000428626 ASAP1Q9ULH1 1129 aa21.34■■□□□ 1.01
SEC13-210ENST00000428626 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
SEC13-210ENST00000428626 UBR3Q6ZT12 1888 aa21.32■■□□□ 1
SEC13-210ENST00000428626 CHD4Q14839 1912 aa21.32■■□□□ 1
SEC13-210ENST00000428626 LINC00116Q8NCU8 138 aa21.32■■□□□ 1
SEC13-210ENST00000428626 LOC102724428A0A0B4J2F2 783 aa21.31■■□□□ 1
SEC13-210ENST00000428626 SIK1P57059 783 aa21.31■■□□□ 1
SEC13-210ENST00000428626 ITPK1Q13572 414 aa21.31■■□□□ 1
SEC13-210ENST00000428626 AEBP1Q8IUX7 1158 aa21.31■■□□□ 1
SEC13-210ENST00000428626 TMOD3Q9NYL9 352 aa21.31■■□□□ 1
SEC13-210ENST00000428626 MORC1Q86VD1 984 aa21.3■■□□□ 1
SEC13-210ENST00000428626 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
SEC13-210ENST00000428626 ZNF784Q8NCA9 323 aaPredicted RBP21.29■■□□□ 1
SEC13-210ENST00000428626 ATG3Q9NT62 314 aa21.29■■□□□ 1
SEC13-210ENST00000428626 PLEKHG2Q9H7P9 1386 aa21.28■■□□□ 1
SEC13-210ENST00000428626 GPR162Q16538 588 aa21.28■■□□□ 1
SEC13-210ENST00000428626 AMER1Q5JTC6 1135 aaPredicted RBP21.28■■□□□ 1
SEC13-210ENST00000428626 KDM6AO15550 1401 aaPredicted RBP21.28■■□□□ 1
SEC13-210ENST00000428626 PHF14O94880 888 aa21.27■■□□□ 1
SEC13-210ENST00000428626 AK7Q96M32 723 aa21.27■■□□□ 1
SEC13-210ENST00000428626 SLC4A9Q96Q91 983 aa21.27■■□□□ 1
SEC13-210ENST00000428626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.26■□□□□ 0.99
SEC13-210ENST00000428626 FLAD1Q8NFF5 587 aa21.26■□□□□ 0.99
SEC13-210ENST00000428626 KNSTRNQ9Y448 316 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms