RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 GOLGA6L10A6NI86 522 aa10.59□□□□□ -0.71
CTNND1-208ENST00000428599 PNISRQ8TF01 805 aaKnown RBP10.59□□□□□ -0.71
CTNND1-208ENST00000428599 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
CTNND1-208ENST00000428599 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
CTNND1-208ENST00000428599 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
CTNND1-208ENST00000428599 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
CTNND1-208ENST00000428599 C22orf23Q9BZE7 217 aa10.59□□□□□ -0.71
CTNND1-208ENST00000428599 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
CTNND1-208ENST00000428599 DHX8Q14562 1220 aaKnown RBP10.58□□□□□ -0.72
CTNND1-208ENST00000428599 TRIM5Q9C035 493 aa10.58□□□□□ -0.72
CTNND1-208ENST00000428599 IBSPP21815 317 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-208ENST00000428599 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.72
CTNND1-208ENST00000428599 ENOX2Q16206 610 aaKnown RBP10.57□□□□□ -0.72
CTNND1-208ENST00000428599 TMEM87AQ8NBN3 555 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
CTNND1-208ENST00000428599 RABEP1Q15276 862 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 CCDC181Q5TID7 509 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 MCM2P49736 904 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 PPP6R1Q9UPN7 881 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 TNIP1Q15025 636 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 FAM13BQ9NYF5 915 aa10.57□□□□□ -0.72
CTNND1-208ENST00000428599 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 GBP2P32456 591 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-208ENST00000428599 PPFIBP1Q86W92 1011 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 SEPT11Q9NVA2 429 aaKnown RBP10.56□□□□□ -0.72
CTNND1-208ENST00000428599 ATP10BO94823 1461 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 AXDND1Q5T1B0 1012 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-208ENST00000428599 NUP133Q8WUM0 1156 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 ANKRD1Q15327 319 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 PPP4R3AQ6IN85 833 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 SCLT1Q96NL6 688 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 GPATCH8Q9UKJ3 1502 aaKnown RBP10.56□□□□□ -0.72
CTNND1-208ENST00000428599 GNAI2P04899 355 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 STK11IPQ8N1F8 1099 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 FMNL2Q96PY5 1086 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 TSPYL1Q9H0U9 437 aa10.56□□□□□ -0.72
CTNND1-208ENST00000428599 NOS1P29475 1434 aa10.55□□□□□ -0.72
CTNND1-208ENST00000428599 CDKL5O76039 1030 aa10.55□□□□□ -0.72
CTNND1-208ENST00000428599 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-208ENST00000428599 TEX14Q8IWB6 1497 aa10.55□□□□□ -0.72
CTNND1-208ENST00000428599 GOLGA6L7A0A1B0GV03 622 aa10.55□□□□□ -0.72
CTNND1-208ENST00000428599 SERPINC1P01008 464 aa10.55□□□□□ -0.72
CTNND1-208ENST00000428599 MYL6BP14649 208 aa10.55□□□□□ -0.72
CTNND1-208ENST00000428599 KIF21AQ7Z4S6 1674 aa10.55□□□□□ -0.72
CTNND1-208ENST00000428599 SSBP05455 408 aaKnown RBP eCLIP10.55□□□□□ -0.721e-7■■■■■ 26.8
CTNND1-208ENST00000428599 CT47B1P0C2W7 299 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-208ENST00000428599 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 NOB1Q9ULX3 412 aaKnown RBP10.54□□□□□ -0.72
CTNND1-208ENST00000428599 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 FOXO3O43524 673 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 RAI14Q9P0K7 980 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
CTNND1-208ENST00000428599 UBAC1Q9BSL1 405 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 PLCH2O75038 1416 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 BTBD11A6QL63 1104 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 MBD3O95983 291 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 FAM43AQ8N2R8 423 aa10.54□□□□□ -0.72
CTNND1-208ENST00000428599 TDO2P48775 406 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 C1orf115Q9H7X2 142 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 ZNF287Q9HBT7 754 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 CYP46A1Q9Y6A2 500 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 CTTNBP2Q8WZ74 1663 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 WASLO00401 505 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-208ENST00000428599 FCHSD2O94868 740 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 NME9Q86XW9 330 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 CCDC112Q8NEF3 446 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 TNRQ92752 1358 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 ADAMTS12P58397 1594 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 WDR7Q9Y4E6 1490 aa10.53□□□□□ -0.72
CTNND1-208ENST00000428599 CEBPZQ03701 1054 aaKnown RBP10.53□□□□□ -0.72
CTNND1-208ENST00000428599 CETN2P41208 172 aa10.52□□□□□ -0.72
CTNND1-208ENST00000428599 JAKMIP3Q5VZ66 844 aa10.52□□□□□ -0.72
CTNND1-208ENST00000428599 WDR63Q8IWG1 891 aa10.52□□□□□ -0.72
CTNND1-208ENST00000428599 TSPY26PQ9H489 355 aa10.52□□□□□ -0.72
CTNND1-208ENST00000428599 PPP1R12BO60237 982 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-208ENST00000428599 CCT4P50991 539 aaKnown RBP10.52□□□□□ -0.73
CTNND1-208ENST00000428599 CTNNA3Q9UI47 895 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 CBFA2T2O43439 604 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 NEK4P51957 841 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-208ENST00000428599 IQCEQ6IPM2 695 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 BICDL1Q6ZP65 573 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 PLCD4Q9BRC7 762 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 NUP153P49790 1475 aaKnown RBP10.52□□□□□ -0.73
CTNND1-208ENST00000428599 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 SSR1P43307 286 aaKnown RBP10.52□□□□□ -0.73
CTNND1-208ENST00000428599 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 WASF1Q92558 559 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 BCL11BQ9C0K0 894 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-208ENST00000428599 USP5P45974 858 aa10.52□□□□□ -0.73
CTNND1-208ENST00000428599 GNAT3A8MTJ3 354 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 BCAR3O75815 825 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 SIL1Q9H173 461 aa10.51□□□□□ -0.73
CTNND1-208ENST00000428599 ITSN2Q9NZM3 1697 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms