RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 IGSF1Q8N6C5 1336 aa31.54■■■□□ 2.64
GLI3-202ENST00000428534 IL13P35225 146 aa31.54■■■□□ 2.64
GLI3-202ENST00000428534 LRRC37A3O60309 1634 aa31.53■■■□□ 2.64
GLI3-202ENST00000428534 ZCRB1Q8TBF4 217 aaKnown RBP31.52■■■□□ 2.64
GLI3-202ENST00000428534 RGPD2P0DJD1 1756 aa31.52■■■□□ 2.64
GLI3-202ENST00000428534 OVOS2A0A0G2JMS6 1433 aa31.51■■■□□ 2.64
GLI3-202ENST00000428534 NUDCQ9Y266 331 aa31.5■■■□□ 2.63
GLI3-202ENST00000428534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.48■■■□□ 2.63
GLI3-202ENST00000428534 BCL9O00512 1426 aa31.48■■■□□ 2.63
GLI3-202ENST00000428534 MARCH10Q8NA82 808 aaPredicted RBP31.47■■■□□ 2.63
GLI3-202ENST00000428534 SPG7Q9UQ90 795 aa31.47■■■□□ 2.63
GLI3-202ENST00000428534 MEGF6O75095 1541 aa31.46■■■□□ 2.63
GLI3-202ENST00000428534 TRIM37O94972 964 aa31.45■■■□□ 2.63
GLI3-202ENST00000428534 MYBBP1AQ9BQG0 1328 aaKnown RBP31.45■■■□□ 2.62
GLI3-202ENST00000428534 EZH2Q15910 746 aaKnown RBP31.43■■■□□ 2.62
GLI3-202ENST00000428534 SULT6B1Q6IMI4 303 aa31.43■■■□□ 2.62
GLI3-202ENST00000428534 DDX54Q8TDD1 881 aaKnown RBP31.43■■■□□ 2.62
GLI3-202ENST00000428534 PRKRIP1Q9H875 184 aaPredicted RBP31.43■■■□□ 2.62
GLI3-202ENST00000428534 PCDH11XQ9BZA7 1347 aa31.43■■■□□ 2.62
GLI3-202ENST00000428534 PCDH11YQ9BZA8 1340 aa31.43■■■□□ 2.62
GLI3-202ENST00000428534 KDRP35968 1356 aa31.42■■■□□ 2.62
GLI3-202ENST00000428534 COL3A1P02461 1466 aaPredicted RBP31.41■■■□□ 2.62
GLI3-202ENST00000428534 AMOTQ4VCS5 1084 aa31.41■■■□□ 2.62
GLI3-202ENST00000428534 U2SURPO15042 1029 aaKnown RBP31.4■■■□□ 2.62
GLI3-202ENST00000428534 PLEKHO1Q53GL0 409 aaPredicted RBP31.4■■■□□ 2.62
GLI3-202ENST00000428534 RREB1Q92766 1687 aa31.39■■■□□ 2.62
GLI3-202ENST00000428534 R3HDM1Q15032 1099 aaKnown RBP31.39■■■□□ 2.62
GLI3-202ENST00000428534 CAMKK2Q96RR4 588 aa31.39■■■□□ 2.62
GLI3-202ENST00000428534 NUP188Q5SRE5 1749 aa31.35■■■□□ 2.61
GLI3-202ENST00000428534 ANP32CO43423 234 aa31.35■■■□□ 2.61
GLI3-202ENST00000428534 APBA3O96018 575 aa31.34■■■□□ 2.61
GLI3-202ENST00000428534 AEBP1Q8IUX7 1158 aa31.34■■■□□ 2.61
GLI3-202ENST00000428534 IFNL2Q8IZJ0 200 aa31.34■■■□□ 2.61
GLI3-202ENST00000428534 BCL11BQ9C0K0 894 aaPredicted RBP31.34■■■□□ 2.61
GLI3-202ENST00000428534 HMOX1P09601 288 aa31.32■■■□□ 2.6
GLI3-202ENST00000428534 PKD1L3Q7Z443 1732 aa31.32■■■□□ 2.6
GLI3-202ENST00000428534 HSP90AB1P08238 724 aaKnown RBP31.31■■■□□ 2.6
GLI3-202ENST00000428534 U2AF1L5P0DN76 240 aaPredicted RBP31.31■■■□□ 2.6
GLI3-202ENST00000428534 U2AF1Q01081 240 aaKnown RBP eCLIP31.31■■■□□ 2.6
GLI3-202ENST00000428534 PNNQ9H307 717 aaKnown RBP31.3■■■□□ 2.6
GLI3-202ENST00000428534 CYP27B1O15528 508 aa31.29■■■□□ 2.6
GLI3-202ENST00000428534 FCHSD2O94868 740 aa31.28■■■□□ 2.6
GLI3-202ENST00000428534 NKX1-1Q15270 411 aaPredicted RBP31.28■■■□□ 2.6
GLI3-202ENST00000428534 SBF2Q86WG5 1849 aa31.28■■■□□ 2.6
GLI3-202ENST00000428534 C1orf141Q5JVX7 400 aa31.27■■■□□ 2.6
GLI3-202ENST00000428534 PHKG2P15735 406 aa31.26■■■□□ 2.59
GLI3-202ENST00000428534 SHANK3Q9BYB0 1731 aa31.26■■■□□ 2.59
GLI3-202ENST00000428534 NEFMP07197 916 aa31.25■■■□□ 2.59
GLI3-202ENST00000428534 ZNF530Q6P9A1 599 aaPredicted RBP31.25■■■□□ 2.59
GLI3-202ENST00000428534 ACSBG1Q96GR2 724 aa31.24■■■□□ 2.59
GLI3-202ENST00000428534 RSPH6AQ9H0K4 717 aa31.22■■■□□ 2.59
GLI3-202ENST00000428534 PLSCR1O15162 318 aa31.21■■■□□ 2.59
GLI3-202ENST00000428534 AKAP4Q5JQC9 854 aa31.21■■■□□ 2.59
GLI3-202ENST00000428534 GAS2L2Q8NHY3 880 aa31.21■■■□□ 2.59
GLI3-202ENST00000428534 DCAF5Q96JK2 942 aa31.21■■■□□ 2.59
GLI3-202ENST00000428534 SYTL4Q96C24 671 aaPredicted RBP31.2■■■□□ 2.59
GLI3-202ENST00000428534 NHSQ6T4R5 1651 aa31.19■■■□□ 2.58
GLI3-202ENST00000428534 PRKAR2BP31323 418 aa31.19■■■□□ 2.58
GLI3-202ENST00000428534 PRIM1P49642 420 aaKnown RBP31.19■■■□□ 2.58
GLI3-202ENST00000428534 KCNQ2O43526 872 aa31.18■■■□□ 2.58
GLI3-202ENST00000428534 RGPD3A6NKT7 1758 aaPredicted RBP31.17■■■□□ 2.58
GLI3-202ENST00000428534 RGPD4Q7Z3J3 1758 aa31.17■■■□□ 2.58
GLI3-202ENST00000428534 WDR43Q15061 677 aaKnown RBP eCLIP31.17■■■□□ 2.58
GLI3-202ENST00000428534 ERVV-2B6SEH9 535 aa31.15■■■□□ 2.58
GLI3-202ENST00000428534 MTHFSDQ2M296 383 aaKnown RBP31.15■■■□□ 2.58
GLI3-202ENST00000428534 HMGB2P26583 209 aaKnown RBP31.13■■■□□ 2.57
GLI3-202ENST00000428534 DOT1LQ8TEK3 1739 aa31.12■■■□□ 2.57
GLI3-202ENST00000428534 NBPF14Q5TI25 921 aa31.11■■■□□ 2.57
GLI3-202ENST00000428534 TMOD3Q9NYL9 352 aa31.11■■■□□ 2.57
GLI3-202ENST00000428534 MPRIPQ6WCQ1 1025 aa31.1■■■□□ 2.57
GLI3-202ENST00000428534 PTF1AQ7RTS3 328 aa31.1■■■□□ 2.57
GLI3-202ENST00000428534 MAPK8IP3Q9UPT6 1336 aa31.09■■■□□ 2.57
GLI3-202ENST00000428534 GNAT3A8MTJ3 354 aa31.09■■■□□ 2.57
GLI3-202ENST00000428534 SMARCC1Q92922 1105 aaPredicted RBP31.08■■■□□ 2.57
GLI3-202ENST00000428534 PHACTR3Q96KR7 559 aa31.08■■■□□ 2.57
GLI3-202ENST00000428534 KAT6BQ8WYB5 2073 aa31.07■■■□□ 2.56
GLI3-202ENST00000428534 CABP4P57796 275 aa31.07■■■□□ 2.56
GLI3-202ENST00000428534 MAP3K5Q99683 1374 aa31.05■■■□□ 2.56
GLI3-202ENST00000428534 PLEKHF1Q96S99 279 aa31.05■■■□□ 2.56
GLI3-202ENST00000428534 HTATSF1O43719 755 aaKnown RBP31.04■■■□□ 2.56
GLI3-202ENST00000428534 BTAF1O14981 1849 aa31.03■■■□□ 2.56
GLI3-202ENST00000428534 RNMTO43148 476 aaKnown RBP31.03■■■□□ 2.56
GLI3-202ENST00000428534 SLC27A3Q5K4L6 730 aa31.03■■■□□ 2.56
GLI3-202ENST00000428534 PIGBQ92521 554 aa31.03■■■□□ 2.56
GLI3-202ENST00000428534 RTF1Q92541 710 aaKnown RBP31.03■■■□□ 2.56
GLI3-202ENST00000428534 KDM6AO15550 1401 aaPredicted RBP31.03■■■□□ 2.56
GLI3-202ENST00000428534 TXNRD1Q16881 649 aa31.02■■■□□ 2.56
GLI3-202ENST00000428534 MRS2Q9HD23 443 aa31.02■■■□□ 2.56
GLI3-202ENST00000428534 ANO8Q9HCE9 1232 aaPredicted RBP31.01■■■□□ 2.55
GLI3-202ENST00000428534 CASZ1Q86V15 1759 aa31.01■■■□□ 2.55
GLI3-202ENST00000428534 ADAMTS8Q9UP79 889 aa31■■■□□ 2.55
GLI3-202ENST00000428534 TOGARAM1Q9Y4F4 1720 aa31■■■□□ 2.55
GLI3-202ENST00000428534 RUNDC1Q96C34 613 aa30.99■■■□□ 2.55
GLI3-202ENST00000428534 SLC52A2Q9HAB3 445 aa30.98■■■□□ 2.55
GLI3-202ENST00000428534 ITGB4P16144 1822 aa30.97■■■□□ 2.55
GLI3-202ENST00000428534 NFE2L2Q16236 605 aa30.97■■■□□ 2.55
GLI3-202ENST00000428534 NFATC2IPQ8NCF5 419 aa30.97■■■□□ 2.55
GLI3-202ENST00000428534 LGR6Q9HBX8 967 aa30.97■■■□□ 2.55
GLI3-202ENST00000428534 TEFQ10587 303 aa30.96■■■□□ 2.55
GLI3-202ENST00000428534 PROM2Q8N271 834 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms