RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 CCNL1Q9UK58 526 aaPredicted RBP11.71□□□□□ -0.53
ITSN1-216ENST00000428240 ZNF526Q8TF50 670 aaPredicted RBP11.7□□□□□ -0.54
ITSN1-216ENST00000428240 IP6K1Q92551 441 aa11.7□□□□□ -0.54
ITSN1-216ENST00000428240 GPBP1L1Q9HC44 474 aaPredicted RBP11.7□□□□□ -0.54
ITSN1-216ENST00000428240 LY75O60449 1722 aa11.69□□□□□ -0.54
ITSN1-216ENST00000428240 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
ITSN1-216ENST00000428240 HSPA6P17066 643 aa11.69□□□□□ -0.54
ITSN1-216ENST00000428240 TMC1Q8TDI8 760 aa11.69□□□□□ -0.54
ITSN1-216ENST00000428240 SLC12A5Q9H2X9 1139 aa11.69□□□□□ -0.54
ITSN1-216ENST00000428240 ADCY9O60503 1353 aa11.68□□□□□ -0.54
ITSN1-216ENST00000428240 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
ITSN1-216ENST00000428240 FBLN1P23142 703 aa11.67□□□□□ -0.54
ITSN1-216ENST00000428240 HDGFL2Q7Z4V5 671 aaPredicted RBP11.67□□□□□ -0.54
ITSN1-216ENST00000428240 ZCRB1Q8TBF4 217 aaKnown RBP11.67□□□□□ -0.54
ITSN1-216ENST00000428240 CD2APQ9Y5K6 639 aa11.67□□□□□ -0.54
ITSN1-216ENST00000428240 EDC4Q6P2E9 1401 aaKnown RBP11.67□□□□□ -0.54
ITSN1-216ENST00000428240 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
ITSN1-216ENST00000428240 USP47Q96K76 1375 aa11.67□□□□□ -0.54
ITSN1-216ENST00000428240 MEGF6O75095 1541 aa11.66□□□□□ -0.54
ITSN1-216ENST00000428240 KAT6BQ8WYB5 2073 aa11.66□□□□□ -0.54
ITSN1-216ENST00000428240 FAM208AQ9UK61 1670 aaKnown RBP11.66□□□□□ -0.54
ITSN1-216ENST00000428240 WWC3Q9ULE0 1092 aa11.66□□□□□ -0.54
ITSN1-216ENST00000428240 MAP3K19Q56UN5 1328 aa11.65□□□□□ -0.54
ITSN1-216ENST00000428240 HOXC9P31274 260 aa11.65□□□□□ -0.54
ITSN1-216ENST00000428240 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
ITSN1-216ENST00000428240 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
ITSN1-216ENST00000428240 KIF3CO14782 793 aa11.63□□□□□ -0.55
ITSN1-216ENST00000428240 NEUROD1Q13562 356 aa11.63□□□□□ -0.55
ITSN1-216ENST00000428240 USHBP1Q8N6Y0 703 aa11.63□□□□□ -0.55
ITSN1-216ENST00000428240 TERF2IPQ9NYB0 399 aa11.63□□□□□ -0.55
ITSN1-216ENST00000428240 IGSF1Q8N6C5 1336 aa11.62□□□□□ -0.55
ITSN1-216ENST00000428240 C5P01031 1676 aa11.62□□□□□ -0.55
ITSN1-216ENST00000428240 AMPHP49418 695 aa11.62□□□□□ -0.55
ITSN1-216ENST00000428240 NBPF6Q5VWK0 638 aa11.62□□□□□ -0.55
ITSN1-216ENST00000428240 NBPF4Q96M43 638 aa11.62□□□□□ -0.55
ITSN1-216ENST00000428240 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
ITSN1-216ENST00000428240 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
ITSN1-216ENST00000428240 COG3Q96JB2 828 aa11.61□□□□□ -0.55
ITSN1-216ENST00000428240 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
ITSN1-216ENST00000428240 PALLDQ8WX93 1383 aa11.61□□□□□ -0.55
ITSN1-216ENST00000428240 PHF14O94880 888 aa11.6□□□□□ -0.55
ITSN1-216ENST00000428240 RRS1Q15050 365 aaKnown RBP11.6□□□□□ -0.55
ITSN1-216ENST00000428240 MPRIPQ6WCQ1 1025 aa11.59□□□□□ -0.55
ITSN1-216ENST00000428240 TOGARAM1Q9Y4F4 1720 aa11.58□□□□□ -0.56
ITSN1-216ENST00000428240 DNAJC5GQ8N7S2 189 aa11.58□□□□□ -0.56
ITSN1-216ENST00000428240 RAPGEF4Q8WZA2 1011 aa11.58□□□□□ -0.56
ITSN1-216ENST00000428240 AK7Q96M32 723 aa11.58□□□□□ -0.56
ITSN1-216ENST00000428240 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
ITSN1-216ENST00000428240 C4BP0C0L5 1744 aa11.57□□□□□ -0.56
ITSN1-216ENST00000428240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.57□□□□□ -0.56
ITSN1-216ENST00000428240 CYP27B1O15528 508 aa11.57□□□□□ -0.56
ITSN1-216ENST00000428240 TATP17735 454 aaPredicted RBP11.57□□□□□ -0.56
ITSN1-216ENST00000428240 APLP1P51693 650 aa11.57□□□□□ -0.56
ITSN1-216ENST00000428240 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
ITSN1-216ENST00000428240 PCDH11XQ9BZA7 1347 aa11.57□□□□□ -0.56
ITSN1-216ENST00000428240 PCDH11YQ9BZA8 1340 aa11.57□□□□□ -0.56
ITSN1-216ENST00000428240 RTL1A6NKG5 1358 aa11.56□□□□□ -0.56
ITSN1-216ENST00000428240 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
ITSN1-216ENST00000428240 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
ITSN1-216ENST00000428240 PIGBQ92521 554 aa11.55□□□□□ -0.56
ITSN1-216ENST00000428240 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
ITSN1-216ENST00000428240 SMG6Q86US8 1419 aaKnown RBP11.54□□□□□ -0.56
ITSN1-216ENST00000428240 CICQ96RK0 1608 aaPredicted RBP11.54□□□□□ -0.56
ITSN1-216ENST00000428240 TOMM70O94826 608 aa11.54□□□□□ -0.56
ITSN1-216ENST00000428240 HMGB2P26583 209 aaKnown RBP11.54□□□□□ -0.56
ITSN1-216ENST00000428240 SSFA2P28290 1259 aa11.54□□□□□ -0.56
ITSN1-216ENST00000428240 HSP90AB2PQ58FF8 381 aa11.54□□□□□ -0.56
ITSN1-216ENST00000428240 SMARCC1Q92922 1105 aaPredicted RBP11.54□□□□□ -0.56
ITSN1-216ENST00000428240 TESK2Q96S53 571 aa11.54□□□□□ -0.56
ITSN1-216ENST00000428240 UBR3Q6ZT12 1888 aa11.53□□□□□ -0.56
ITSN1-216ENST00000428240 PXDNLA1KZ92 1463 aa11.53□□□□□ -0.56
ITSN1-216ENST00000428240 FYB1O15117 783 aa11.53□□□□□ -0.56
ITSN1-216ENST00000428240 NMRK2Q9NPI5 230 aa11.53□□□□□ -0.56
ITSN1-216ENST00000428240 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.56
ITSN1-216ENST00000428240 LOC102724428A0A0B4J2F2 783 aa11.52□□□□□ -0.57
ITSN1-216ENST00000428240 GNPATO15228 680 aa11.52□□□□□ -0.57
ITSN1-216ENST00000428240 MMP10P09238 476 aa11.52□□□□□ -0.57
ITSN1-216ENST00000428240 SIK1P57059 783 aa11.52□□□□□ -0.57
ITSN1-216ENST00000428240 HTRA3P83110 453 aa11.52□□□□□ -0.57
ITSN1-216ENST00000428240 ITPK1Q13572 414 aa11.52□□□□□ -0.57
ITSN1-216ENST00000428240 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
ITSN1-216ENST00000428240 INSRP06213 1382 aa11.52□□□□□ -0.57
ITSN1-216ENST00000428240 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
ITSN1-216ENST00000428240 A0A0G2JLW4 131 aa11.51□□□□□ -0.57
ITSN1-216ENST00000428240 COL13A1Q5TAT6 717 aaPredicted RBP11.51□□□□□ -0.57
ITSN1-216ENST00000428240 KIAA1551Q9HCM1 1747 aa11.5□□□□□ -0.57
ITSN1-216ENST00000428240 NKX1-1Q15270 411 aaPredicted RBP11.5□□□□□ -0.57
ITSN1-216ENST00000428240 ASAP1Q9ULH1 1129 aa11.5□□□□□ -0.57
ITSN1-216ENST00000428240 MAP2P11137 1827 aaKnown RBP11.5□□□□□ -0.57
ITSN1-216ENST00000428240 ITGB4P16144 1822 aa11.5□□□□□ -0.57
ITSN1-216ENST00000428240 FLT4P35916 1363 aa11.5□□□□□ -0.57
ITSN1-216ENST00000428240 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
ITSN1-216ENST00000428240 TGFB2P61812 414 aa11.49□□□□□ -0.57
ITSN1-216ENST00000428240 ARHGAP27Q6ZUM4 889 aa11.49□□□□□ -0.57
ITSN1-216ENST00000428240 PCNTO95613 3336 aa11.48□□□□□ -0.57
ITSN1-216ENST00000428240 KLRG1Q96E93 195 aa11.48□□□□□ -0.57
ITSN1-216ENST00000428240 EMILIN1Q9Y6C2 1016 aa11.48□□□□□ -0.57
ITSN1-216ENST00000428240 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
ITSN1-216ENST00000428240 PKD1L3Q7Z443 1732 aa11.48□□□□□ -0.57
ITSN1-216ENST00000428240 N4BP2Q86UW6 1770 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms