RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 TNRQ92752 1358 aa9.79□□□□□ -0.84
LRCH3-204ENST00000428136 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
LRCH3-204ENST00000428136 TTC22Q5TAA0 569 aa9.78□□□□□ -0.84
LRCH3-204ENST00000428136 PLEKHG1Q9ULL1 1385 aa9.78□□□□□ -0.84
LRCH3-204ENST00000428136 MRE11P49959 708 aa9.78□□□□□ -0.84
LRCH3-204ENST00000428136 ARHGEF10O15013 1369 aa9.78□□□□□ -0.84
LRCH3-204ENST00000428136 RTL1A6NKG5 1358 aa9.78□□□□□ -0.84
LRCH3-204ENST00000428136 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
LRCH3-204ENST00000428136 SKOR2Q2VWA4 1001 aaPredicted RBP9.78□□□□□ -0.84
LRCH3-204ENST00000428136 ANO8Q9HCE9 1232 aaPredicted RBP9.78□□□□□ -0.84
LRCH3-204ENST00000428136 FMN2Q9NZ56 1722 aa9.77□□□□□ -0.84
LRCH3-204ENST00000428136 DCTN1Q14203 1278 aa9.77□□□□□ -0.84
LRCH3-204ENST00000428136 CEP85Q6P2H3 762 aa9.77□□□□□ -0.84
LRCH3-204ENST00000428136 HSP90AB1P08238 724 aaKnown RBP9.77□□□□□ -0.85
LRCH3-204ENST00000428136 AEBP1Q8IUX7 1158 aa9.77□□□□□ -0.85
LRCH3-204ENST00000428136 GBP4Q96PP9 640 aa9.77□□□□□ -0.85
LRCH3-204ENST00000428136 KDRP35968 1356 aa9.77□□□□□ -0.85
LRCH3-204ENST00000428136 SULT6B1Q6IMI4 303 aa9.77□□□□□ -0.85
LRCH3-204ENST00000428136 LRRC37A3O60309 1634 aa9.76□□□□□ -0.85
LRCH3-204ENST00000428136 ACEP12821 1306 aa9.76□□□□□ -0.85
LRCH3-204ENST00000428136 RIMS1Q86UR5 1692 aaKnown RBP9.76□□□□□ -0.85
LRCH3-204ENST00000428136 KIF13AQ9H1H9 1805 aa9.76□□□□□ -0.85
LRCH3-204ENST00000428136 RABEP1Q15276 862 aa9.76□□□□□ -0.85
LRCH3-204ENST00000428136 USP26Q9BXU7 913 aa9.76□□□□□ -0.85
LRCH3-204ENST00000428136 USP54Q70EL1 1684 aa9.75□□□□□ -0.85
LRCH3-204ENST00000428136 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
LRCH3-204ENST00000428136 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
LRCH3-204ENST00000428136 RRAGDQ9NQL2 400 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-204ENST00000428136 N4BP2Q86UW6 1770 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-204ENST00000428136 PTPRUQ92729 1446 aa9.75□□□□□ -0.85
LRCH3-204ENST00000428136 TUBGCP6Q96RT7 1819 aa9.74□□□□□ -0.85
LRCH3-204ENST00000428136 MSH6P52701 1360 aa9.74□□□□□ -0.85
LRCH3-204ENST00000428136 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
LRCH3-204ENST00000428136 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
LRCH3-204ENST00000428136 IBTKQ9P2D0 1353 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-204ENST00000428136 CYP2E1P05181 493 aaPredicted RBP9.74□□□□□ -0.85
LRCH3-204ENST00000428136 GRPEL1Q9HAV7 217 aa9.74□□□□□ -0.85
LRCH3-204ENST00000428136 SLIT1O75093 1534 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 MLECQ14165 292 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 HSP90AB2PQ58FF8 381 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 C16orf71Q8IYS4 520 aaPredicted RBP9.73□□□□□ -0.85
LRCH3-204ENST00000428136 SBNO1A3KN83 1393 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 HTATSF1O43719 755 aaKnown RBP9.73□□□□□ -0.85
LRCH3-204ENST00000428136 KRT24Q2M2I5 525 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 MCM10Q7L590 875 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 GZF1Q9H116 711 aaPredicted RBP9.73□□□□□ -0.85
LRCH3-204ENST00000428136 ARHGAP23Q9P227 1491 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 SDSP20132 328 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 PANK2Q9BZ23 570 aa9.73□□□□□ -0.85
LRCH3-204ENST00000428136 SOS1Q07889 1333 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-204ENST00000428136 CCT4P50991 539 aaKnown RBP9.72□□□□□ -0.85
LRCH3-204ENST00000428136 MAP3K19Q56UN5 1328 aa9.72□□□□□ -0.85
LRCH3-204ENST00000428136 XRN1Q8IZH2 1706 aaKnown RBP9.72□□□□□ -0.85
LRCH3-204ENST00000428136 FLT4P35916 1363 aa9.72□□□□□ -0.85
LRCH3-204ENST00000428136 MEIS3Q99687 375 aa9.72□□□□□ -0.85
LRCH3-204ENST00000428136 IGSF1Q8N6C5 1336 aa9.72□□□□□ -0.85
LRCH3-204ENST00000428136 SALL3Q9BXA9 1300 aa9.72□□□□□ -0.85
LRCH3-204ENST00000428136 CLCN1P35523 988 aa9.71□□□□□ -0.85
LRCH3-204ENST00000428136 IL17RAQ96F46 866 aa9.71□□□□□ -0.85
LRCH3-204ENST00000428136 ESF1Q9H501 851 aaKnown RBP9.71□□□□□ -0.85
LRCH3-204ENST00000428136 PIK3C2AO00443 1686 aa9.71□□□□□ -0.85
LRCH3-204ENST00000428136 FAM208AQ9UK61 1670 aaKnown RBP9.71□□□□□ -0.85
LRCH3-204ENST00000428136 MARF1Q9Y4F3 1742 aaKnown RBP9.71□□□□□ -0.85
LRCH3-204ENST00000428136 DIP2AQ14689 1571 aa9.71□□□□□ -0.86
LRCH3-204ENST00000428136 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
LRCH3-204ENST00000428136 LTKP29376 864 aa9.71□□□□□ -0.86
LRCH3-204ENST00000428136 MTHFSDQ2M296 383 aaKnown RBP9.71□□□□□ -0.86
LRCH3-204ENST00000428136 OTUD7AQ8TE49 926 aaPredicted RBP9.71□□□□□ -0.86
LRCH3-204ENST00000428136 CWC22Q9HCG8 908 aaKnown RBP9.71□□□□□ -0.86
LRCH3-204ENST00000428136 CACNA1FO60840 1977 aa9.71□□□□□ -0.86
LRCH3-204ENST00000428136 AEBP2Q6ZN18 517 aaPredicted RBP9.71□□□□□ -0.86
LRCH3-204ENST00000428136 NWD1Q149M9 1564 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 CEP170BQ9Y4F5 1589 aaPredicted RBP9.7□□□□□ -0.86
LRCH3-204ENST00000428136 HMMRO75330 724 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 BAG4O95429 457 aaKnown RBP9.7□□□□□ -0.86
LRCH3-204ENST00000428136 SSFA2P28290 1259 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 NUCB2P80303 420 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 KLHL40Q2TBA0 621 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 GAS2L3Q86XJ1 694 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 BABAM1Q9NWV8 329 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 CASC1Q6TDU7 716 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 PXDNLA1KZ92 1463 aa9.7□□□□□ -0.86
LRCH3-204ENST00000428136 REC8O95072 547 aa9.69□□□□□ -0.86
LRCH3-204ENST00000428136 HSP90AA1P07900 732 aaKnown RBP9.69□□□□□ -0.86
LRCH3-204ENST00000428136 TBX22Q9Y458 520 aa9.69□□□□□ -0.86
LRCH3-204ENST00000428136 ANKARQ7Z5J8 1434 aa9.69□□□□□ -0.86
LRCH3-204ENST00000428136 ERC2O15083 957 aa9.68□□□□□ -0.86
LRCH3-204ENST00000428136 SMARCA5O60264 1052 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-204ENST00000428136 PDE1AP54750 535 aa9.68□□□□□ -0.86
LRCH3-204ENST00000428136 G2E3Q7L622 706 aa9.68□□□□□ -0.86
LRCH3-204ENST00000428136 GOLGA6L22H0YM25 854 aa9.68□□□□□ -0.86
LRCH3-204ENST00000428136 FOXO3O43524 673 aa9.68□□□□□ -0.86
LRCH3-204ENST00000428136 EYA1Q99502 592 aa9.68□□□□□ -0.86
LRCH3-204ENST00000428136 TSPYL4Q9UJ04 414 aa9.68□□□□□ -0.86
LRCH3-204ENST00000428136 RGPD8O14715 1765 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-204ENST00000428136 GNAI2P04899 355 aa9.67□□□□□ -0.86
LRCH3-204ENST00000428136 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
LRCH3-204ENST00000428136 ST18O60284 1047 aa9.67□□□□□ -0.86
LRCH3-204ENST00000428136 ZNF445P59923 1031 aa9.67□□□□□ -0.86
LRCH3-204ENST00000428136 PPP1R9BQ96SB3 815 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms