RNA–Protein interactions for RNA: ENST00000428078.4

LINC01664-201, Transcript of long intergenic non-protein coding RNA 1664, human

TSL 5

Gene LINC01664, Length 823 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01664-201	ENST00000428078	COL24A1	Q17RW2	1714 aa		18.45	■□□□□ 0.54
LINC01664-201	ENST00000428078	ANKRD36B	Q8N2N9	1353 aa		18.44	■□□□□ 0.54
LINC01664-201	ENST00000428078	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.44	■□□□□ 0.54
LINC01664-201	ENST00000428078	NSD2	O96028	1365 aa		18.43	■□□□□ 0.54
LINC01664-201	ENST00000428078	ZNF526	Q8TF50	670 aa	Predicted RBP	18.42	■□□□□ 0.54
LINC01664-201	ENST00000428078	SIN3A	Q96ST3	1273 aa		18.42	■□□□□ 0.54
LINC01664-201	ENST00000428078	EDC4	Q6P2E9	1401 aa	Known RBP	18.41	■□□□□ 0.54
LINC01664-201	ENST00000428078	COL23A1	Q86Y22	540 aa	Predicted RBP	18.41	■□□□□ 0.54
LINC01664-201	ENST00000428078	IP6K1	Q92551	441 aa		18.41	■□□□□ 0.54
LINC01664-201	ENST00000428078	GPBP1L1	Q9HC44	474 aa	Predicted RBP	18.41	■□□□□ 0.54
LINC01664-201	ENST00000428078	LY75	O60449	1722 aa		18.4	■□□□□ 0.54
LINC01664-201	ENST00000428078	NEUROD1	Q13562	356 aa		18.4	■□□□□ 0.54
LINC01664-201	ENST00000428078	SLC12A5	Q9H2X9	1139 aa		18.4	■□□□□ 0.54
LINC01664-201	ENST00000428078	FAM208A	Q9UK61	1670 aa	Known RBP	18.4	■□□□□ 0.54
LINC01664-201	ENST00000428078		A0A1W2PP64	1363 aa		18.4	■□□□□ 0.54
LINC01664-201	ENST00000428078	USP47	Q96K76	1375 aa		18.4	■□□□□ 0.54
LINC01664-201	ENST00000428078	MEGF6	O75095	1541 aa		18.39	■□□□□ 0.53
LINC01664-201	ENST00000428078	WWC3	Q9ULE0	1092 aa		18.38	■□□□□ 0.53
LINC01664-201	ENST00000428078	ZCRB1	Q8TBF4	217 aa	Known RBP	18.37	■□□□□ 0.53
LINC01664-201	ENST00000428078	TERF2IP	Q9NYB0	399 aa		18.37	■□□□□ 0.53
LINC01664-201	ENST00000428078	MAP3K19	Q56UN5	1328 aa		18.35	■□□□□ 0.53
LINC01664-201	ENST00000428078	HOXC9	P31274	260 aa		18.35	■□□□□ 0.53
LINC01664-201	ENST00000428078	AMPH	P49418	695 aa		18.35	■□□□□ 0.53
LINC01664-201	ENST00000428078	HSPA6	P17066	643 aa		18.34	■□□□□ 0.53
LINC01664-201	ENST00000428078	FBLN1	P23142	703 aa		18.34	■□□□□ 0.53
LINC01664-201	ENST00000428078	USHBP1	Q8N6Y0	703 aa		18.34	■□□□□ 0.53
LINC01664-201	ENST00000428078	CARD11	Q9BXL7	1154 aa		18.34	■□□□□ 0.53
LINC01664-201	ENST00000428078	ADCY9	O60503	1353 aa		18.33	■□□□□ 0.53
LINC01664-201	ENST00000428078	COG3	Q96JB2	828 aa		18.33	■□□□□ 0.52
LINC01664-201	ENST00000428078	CD2AP	Q9Y5K6	639 aa		18.33	■□□□□ 0.52
LINC01664-201	ENST00000428078	C5	P01031	1676 aa		18.32	■□□□□ 0.52
LINC01664-201	ENST00000428078	RGPD2	P0DJD1	1756 aa		18.32	■□□□□ 0.52
LINC01664-201	ENST00000428078	PALLD	Q8WX93	1383 aa		18.3	■□□□□ 0.52
LINC01664-201	ENST00000428078	IGSF1	Q8N6C5	1336 aa		18.29	■□□□□ 0.52
LINC01664-201	ENST00000428078	PHF14	O94880	888 aa		18.29	■□□□□ 0.52
LINC01664-201	ENST00000428078	RAPGEF4	Q8WZA2	1011 aa		18.29	■□□□□ 0.52
LINC01664-201	ENST00000428078	RRS1	Q15050	365 aa	Known RBP	18.28	■□□□□ 0.52
LINC01664-201	ENST00000428078	NBPF6	Q5VWK0	638 aa		18.28	■□□□□ 0.52
LINC01664-201	ENST00000428078	FLAD1	Q8NFF5	587 aa		18.28	■□□□□ 0.52
LINC01664-201	ENST00000428078	AK7	Q96M32	723 aa		18.28	■□□□□ 0.52
LINC01664-201	ENST00000428078	NBPF4	Q96M43	638 aa		18.28	■□□□□ 0.52
LINC01664-201	ENST00000428078	SMG6	Q86US8	1419 aa	Known RBP	18.27	■□□□□ 0.52
LINC01664-201	ENST00000428078	MPRIP	Q6WCQ1	1025 aa		18.27	■□□□□ 0.52
LINC01664-201	ENST00000428078	SMIM5	Q71RC9	77 aa		18.27	■□□□□ 0.52
LINC01664-201	ENST00000428078	AMIGO3	Q86WK7	504 aa		18.26	■□□□□ 0.51
LINC01664-201	ENST00000428078	RTL1	A6NKG5	1358 aa		18.26	■□□□□ 0.51
LINC01664-201	ENST00000428078	TAT	P17735	454 aa	Predicted RBP	18.25	■□□□□ 0.51
LINC01664-201	ENST00000428078	CGNL1	Q0VF96	1302 aa		18.24	■□□□□ 0.51
LINC01664-201	ENST00000428078	PCDH11X	Q9BZA7	1347 aa		18.24	■□□□□ 0.51
LINC01664-201	ENST00000428078	PCDH11Y	Q9BZA8	1340 aa		18.24	■□□□□ 0.51
LINC01664-201	ENST00000428078	C4B	P0C0L5	1744 aa		18.24	■□□□□ 0.51
LINC01664-201	ENST00000428078	TOGARAM1	Q9Y4F4	1720 aa		18.23	■□□□□ 0.51
LINC01664-201	ENST00000428078	TAF1L	Q8IZX4	1826 aa		18.22	■□□□□ 0.51
LINC01664-201	ENST00000428078	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.22	■□□□□ 0.51
LINC01664-201	ENST00000428078	KIF3C	O14782	793 aa		18.22	■□□□□ 0.51
LINC01664-201	ENST00000428078	GGNBP2	Q9H3C7	697 aa		18.21	■□□□□ 0.51
LINC01664-201	ENST00000428078	HMGB2	P26583	209 aa	Known RBP	18.2	■□□□□ 0.5
LINC01664-201	ENST00000428078	CYP27B1	O15528	508 aa		18.19	■□□□□ 0.5
LINC01664-201	ENST00000428078	PUS7	Q96PZ0	661 aa	Known RBP	18.19	■□□□□ 0.5
LINC01664-201	ENST00000428078	NSD3	Q9BZ95	1437 aa		18.19	■□□□□ 0.5
LINC01664-201	ENST00000428078	HSP90AB2P	Q58FF8	381 aa		18.18	■□□□□ 0.5
LINC01664-201	ENST00000428078	SMARCC1	Q92922	1105 aa	Predicted RBP	18.18	■□□□□ 0.5
LINC01664-201	ENST00000428078	UBR3	Q6ZT12	1888 aa		18.18	■□□□□ 0.5
LINC01664-201	ENST00000428078	APLP1	P51693	650 aa		18.17	■□□□□ 0.5
LINC01664-201	ENST00000428078	LINC00116	Q8NCU8	138 aa		18.17	■□□□□ 0.5
LINC01664-201	ENST00000428078	PCNT	O95613	3336 aa		18.16	■□□□□ 0.5
LINC01664-201	ENST00000428078	GNPAT	O15228	680 aa		18.16	■□□□□ 0.5
LINC01664-201	ENST00000428078	SSFA2	P28290	1259 aa		18.16	■□□□□ 0.5
LINC01664-201	ENST00000428078	TESK2	Q96S53	571 aa		18.16	■□□□□ 0.5
LINC01664-201	ENST00000428078	FLT4	P35916	1363 aa		18.16	■□□□□ 0.5
LINC01664-201	ENST00000428078	ST20-MTHFS	A0A0A6YYL1	179 aa		18.15	■□□□□ 0.5
LINC01664-201	ENST00000428078	PIGB	Q92521	554 aa		18.15	■□□□□ 0.5
LINC01664-201	ENST00000428078	CIC	Q96RK0	1608 aa	Predicted RBP	18.15	■□□□□ 0.5
LINC01664-201	ENST00000428078	INSR	P06213	1382 aa		18.15	■□□□□ 0.5
LINC01664-201	ENST00000428078	TONSL	Q96HA7	1378 aa		18.15	■□□□□ 0.5
LINC01664-201	ENST00000428078	LOC102724428	A0A0B4J2F2	783 aa		18.14	■□□□□ 0.49
LINC01664-201	ENST00000428078	FYB1	O15117	783 aa		18.14	■□□□□ 0.49
LINC01664-201	ENST00000428078	SIK1	P57059	783 aa		18.14	■□□□□ 0.49
LINC01664-201	ENST00000428078	BCS1L	Q9Y276	419 aa		18.14	■□□□□ 0.49
LINC01664-201	ENST00000428078	ITGB4	P16144	1822 aa		18.14	■□□□□ 0.49
LINC01664-201	ENST00000428078	PXDNL	A1KZ92	1463 aa		18.14	■□□□□ 0.49
LINC01664-201	ENST00000428078	MMP10	P09238	476 aa		18.13	■□□□□ 0.49
LINC01664-201	ENST00000428078	TOMM70	O94826	608 aa		18.12	■□□□□ 0.49
LINC01664-201	ENST00000428078	ITPK1	Q13572	414 aa		18.11	■□□□□ 0.49
LINC01664-201	ENST00000428078	NMRK2	Q9NPI5	230 aa		18.11	■□□□□ 0.49
LINC01664-201	ENST00000428078	TMOD3	Q9NYL9	352 aa		18.11	■□□□□ 0.49
LINC01664-201	ENST00000428078	PKD1L3	Q7Z443	1732 aa		18.11	■□□□□ 0.49
LINC01664-201	ENST00000428078	ATP6V1A	P38606	617 aa		18.1	■□□□□ 0.49
LINC01664-201	ENST00000428078	EMILIN1	Q9Y6C2	1016 aa		18.1	■□□□□ 0.49
LINC01664-201	ENST00000428078		A0A0G2JLW4	131 aa		18.09	■□□□□ 0.49
LINC01664-201	ENST00000428078	PPM1G	O15355	546 aa	Predicted RBP	18.09	■□□□□ 0.49
LINC01664-201	ENST00000428078	ARHGAP27	Q6ZUM4	889 aa		18.09	■□□□□ 0.49
LINC01664-201	ENST00000428078	ASAP1	Q9ULH1	1129 aa		18.09	■□□□□ 0.49
LINC01664-201	ENST00000428078	MAP2	P11137	1827 aa	Known RBP	18.09	■□□□□ 0.49
LINC01664-201	ENST00000428078	KIF20B	Q96Q89	1820 aa		18.08	■□□□□ 0.48
LINC01664-201	ENST00000428078	HTRA3	P83110	453 aa		18.08	■□□□□ 0.48
LINC01664-201	ENST00000428078	DNAJC5G	Q8N7S2	189 aa		18.08	■□□□□ 0.48
LINC01664-201	ENST00000428078	SPG7	Q9UQ90	795 aa		18.08	■□□□□ 0.48
LINC01664-201	ENST00000428078	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.08	■□□□□ 0.48
LINC01664-201	ENST00000428078	C10orf71	Q711Q0	1435 aa		18.06	■□□□□ 0.48

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