RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
VARS2-203ENST00000428017 PLEKHO1Q53GL0 409 aaPredicted RBP20.15■□□□□ 0.82
VARS2-203ENST00000428017 KRT27Q7Z3Y8 459 aa20.15■□□□□ 0.82
VARS2-203ENST00000428017 OVOS2A0A0G2JMS6 1433 aa20.15■□□□□ 0.82
VARS2-203ENST00000428017 RGPD2P0DJD1 1756 aa20.15■□□□□ 0.82
VARS2-203ENST00000428017 THSD7AQ9UPZ6 1657 aa20.14■□□□□ 0.81
VARS2-203ENST00000428017 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
VARS2-203ENST00000428017 RGPD1P0DJD0 1748 aa20.13■□□□□ 0.81
VARS2-203ENST00000428017 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
VARS2-203ENST00000428017 PLEKHG2Q9H7P9 1386 aa20.13■□□□□ 0.81
VARS2-203ENST00000428017 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
VARS2-203ENST00000428017 DDX54Q8TDD1 881 aaKnown RBP20.13■□□□□ 0.81
VARS2-203ENST00000428017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.13■□□□□ 0.811e-7■■□□□ 12.1
VARS2-203ENST00000428017 PCDH11XQ9BZA7 1347 aa20.12■□□□□ 0.81
VARS2-203ENST00000428017 PCDH11YQ9BZA8 1340 aa20.12■□□□□ 0.81
VARS2-203ENST00000428017 CCER2I3L3R5 266 aa20.12■□□□□ 0.81
VARS2-203ENST00000428017 MIER1Q8N108 512 aa20.12■□□□□ 0.81
VARS2-203ENST00000428017 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
VARS2-203ENST00000428017 PARP4Q9UKK3 1724 aaKnown RBP20.1■□□□□ 0.81
VARS2-203ENST00000428017 MAPK8IP3Q9UPT6 1336 aa20.1■□□□□ 0.81
VARS2-203ENST00000428017 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
VARS2-203ENST00000428017 LRRC37A3O60309 1634 aa20.09■□□□□ 0.81
VARS2-203ENST00000428017 WNK3Q9BYP7 1800 aa20.09■□□□□ 0.81
VARS2-203ENST00000428017 C1orf141Q5JVX7 400 aa20.08■□□□□ 0.81
VARS2-203ENST00000428017 ZNF530Q6P9A1 599 aaPredicted RBP20.08■□□□□ 0.81
VARS2-203ENST00000428017 PNISRQ8TF01 805 aaKnown RBP20.08■□□□□ 0.81
VARS2-203ENST00000428017 IFNL2Q8IZJ0 200 aa20.07■□□□□ 0.8
VARS2-203ENST00000428017 MARCH10Q8NA82 808 aaPredicted RBP20.07■□□□□ 0.8
VARS2-203ENST00000428017 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
VARS2-203ENST00000428017 FAM182BQ5T319 152 aa20.06■□□□□ 0.8
VARS2-203ENST00000428017 FAM196AQ6ZSG2 479 aa20.06■□□□□ 0.8
VARS2-203ENST00000428017 MTHFSDQ2M296 383 aaKnown RBP20.05■□□□□ 0.8
VARS2-203ENST00000428017 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
VARS2-203ENST00000428017 CYP27B1O15528 508 aa20.04■□□□□ 0.8
VARS2-203ENST00000428017 HSP90AB1P08238 724 aaKnown RBP20.04■□□□□ 0.8
VARS2-203ENST00000428017 PHKG2P15735 406 aa20.04■□□□□ 0.8
VARS2-203ENST00000428017 ILDR2Q71H61 639 aa20.04■□□□□ 0.8
VARS2-203ENST00000428017 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
VARS2-203ENST00000428017 PHACTR3Q96KR7 559 aa20.04■□□□□ 0.8
VARS2-203ENST00000428017 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
VARS2-203ENST00000428017 PLEKHF1Q96S99 279 aa20.03■□□□□ 0.8
VARS2-203ENST00000428017 AKAP4Q5JQC9 854 aa20.02■□□□□ 0.8
VARS2-203ENST00000428017 PKD1L3Q7Z443 1732 aa20.01■□□□□ 0.79
VARS2-203ENST00000428017 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
VARS2-203ENST00000428017 GNAT3A8MTJ3 354 aa19.99■□□□□ 0.79
VARS2-203ENST00000428017 NKX1-1Q15270 411 aaPredicted RBP19.99■□□□□ 0.79
VARS2-203ENST00000428017 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
VARS2-203ENST00000428017 DCAF5Q96JK2 942 aa19.99■□□□□ 0.79
VARS2-203ENST00000428017 MAP3K5Q99683 1374 aa19.98■□□□□ 0.79
VARS2-203ENST00000428017 NFE2L2Q16236 605 aa19.98■□□□□ 0.79
VARS2-203ENST00000428017 MPRIPQ6WCQ1 1025 aa19.98■□□□□ 0.79
VARS2-203ENST00000428017 SYTL4Q96C24 671 aaPredicted RBP19.98■□□□□ 0.79
VARS2-203ENST00000428017 ACSBG1Q96GR2 724 aa19.98■□□□□ 0.79
VARS2-203ENST00000428017 BCL9O00512 1426 aa19.98■□□□□ 0.79
VARS2-203ENST00000428017 SF3B2Q13435 895 aaKnown RBP19.96■□□□□ 0.79
VARS2-203ENST00000428017 APAF1O14727 1248 aa19.95■□□□□ 0.78
VARS2-203ENST00000428017 TRIM37O94972 964 aa19.95■□□□□ 0.78
VARS2-203ENST00000428017 PRIM1P49642 420 aaKnown RBP19.95■□□□□ 0.78
VARS2-203ENST00000428017 RIPK4P57078 832 aa19.95■□□□□ 0.78
VARS2-203ENST00000428017 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
VARS2-203ENST00000428017 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
VARS2-203ENST00000428017 SHANK3Q9BYB0 1731 aa19.94■□□□□ 0.78
VARS2-203ENST00000428017 HTATSF1O43719 755 aaKnown RBP19.94■□□□□ 0.78
VARS2-203ENST00000428017 TMPOP42166 694 aaKnown RBP19.94■□□□□ 0.78
VARS2-203ENST00000428017 CABP4P57796 275 aa19.94■□□□□ 0.78
VARS2-203ENST00000428017 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
VARS2-203ENST00000428017 ERVV-2B6SEH9 535 aa19.93■□□□□ 0.78
VARS2-203ENST00000428017 BCL11BQ9C0K0 894 aaPredicted RBP19.93■□□□□ 0.78
VARS2-203ENST00000428017 TMOD3Q9NYL9 352 aa19.93■□□□□ 0.78
VARS2-203ENST00000428017 RNMTO43148 476 aaKnown RBP19.92■□□□□ 0.78
VARS2-203ENST00000428017 CCDC125Q86Z20 511 aa19.92■□□□□ 0.78
VARS2-203ENST00000428017 KCNQ2O43526 872 aa19.91■□□□□ 0.78
VARS2-203ENST00000428017 TEFQ10587 303 aa19.91■□□□□ 0.78
VARS2-203ENST00000428017 LGR6Q9HBX8 967 aa19.91■□□□□ 0.78
VARS2-203ENST00000428017 KDM6AO15550 1401 aaPredicted RBP19.91■□□□□ 0.78
VARS2-203ENST00000428017 MCM10Q7L590 875 aa19.9■□□□□ 0.78
VARS2-203ENST00000428017 IL17REQ8NFR9 667 aa19.89■□□□□ 0.77
VARS2-203ENST00000428017 SLC52A2Q9HAB3 445 aa19.88■□□□□ 0.77
VARS2-203ENST00000428017 APBA3O96018 575 aa19.87■□□□□ 0.77
VARS2-203ENST00000428017 DCTN1Q14203 1278 aa19.87■□□□□ 0.77
VARS2-203ENST00000428017 NFATC2IPQ8NCF5 419 aa19.87■□□□□ 0.77
VARS2-203ENST00000428017 UPF1Q92900 1129 aaKnown RBP eCLIP19.87■□□□□ 0.77
VARS2-203ENST00000428017 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
VARS2-203ENST00000428017 BAG6P46379 1132 aa19.86■□□□□ 0.77
VARS2-203ENST00000428017 PIGBQ92521 554 aa19.86■□□□□ 0.77
VARS2-203ENST00000428017 DOT1LQ8TEK3 1739 aa19.85■□□□□ 0.77
VARS2-203ENST00000428017 PTF1AQ7RTS3 328 aa19.85■□□□□ 0.77
VARS2-203ENST00000428017 NHSQ6T4R5 1651 aa19.84■□□□□ 0.77
VARS2-203ENST00000428017 CEMIPQ8WUJ3 1361 aa19.84■□□□□ 0.77
VARS2-203ENST00000428017 CALD1Q05682 793 aaKnown RBP19.84■□□□□ 0.77
VARS2-203ENST00000428017 NGEFQ8N5V2 710 aa19.84■□□□□ 0.77
VARS2-203ENST00000428017 SMARCC1Q92922 1105 aaPredicted RBP19.84■□□□□ 0.77
VARS2-203ENST00000428017 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
VARS2-203ENST00000428017 THUMPD2Q9BTF0 503 aaKnown RBP19.83■□□□□ 0.77
VARS2-203ENST00000428017 TRIM35Q9UPQ4 493 aa19.83■□□□□ 0.77
VARS2-203ENST00000428017 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
VARS2-203ENST00000428017 BTBD11A6QL63 1104 aa19.81■□□□□ 0.76
VARS2-203ENST00000428017 TAF7Q15545 349 aaPredicted RBP19.81■□□□□ 0.76
VARS2-203ENST00000428017 CCDC27Q2M243 656 aa19.81■□□□□ 0.76
VARS2-203ENST00000428017 TTC5Q8N0Z6 440 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms