RNA–Protein interactions for RNA: ENST00000427843.5

CAP1-213, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 5

Gene CAP1, Length 739 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-213ENST00000427843 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
CAP1-213ENST00000427843 ZCRB1Q8TBF4 217 aaKnown RBP13.73□□□□□ -0.21
CAP1-213ENST00000427843 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
CAP1-213ENST00000427843 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
CAP1-213ENST00000427843 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.21
CAP1-213ENST00000427843 CFAP53Q96M91 514 aa13.71□□□□□ -0.21
CAP1-213ENST00000427843 FAM182BQ5T319 152 aa13.7□□□□□ -0.22
CAP1-213ENST00000427843 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
CAP1-213ENST00000427843 PCDH11XQ9BZA7 1347 aa13.69□□□□□ -0.22
CAP1-213ENST00000427843 PCDH11YQ9BZA8 1340 aa13.69□□□□□ -0.22
CAP1-213ENST00000427843 NKX1-1Q15270 411 aaPredicted RBP13.69□□□□□ -0.22
CAP1-213ENST00000427843 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
CAP1-213ENST00000427843 MYBBP1AQ9BQG0 1328 aaKnown RBP13.68□□□□□ -0.22
CAP1-213ENST00000427843 CYP27B1O15528 508 aa13.68□□□□□ -0.22
CAP1-213ENST00000427843 AMOTQ4VCS5 1084 aa13.68□□□□□ -0.22
CAP1-213ENST00000427843 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
CAP1-213ENST00000427843 BCL11BQ9C0K0 894 aaPredicted RBP13.68□□□□□ -0.22
CAP1-213ENST00000427843 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
CAP1-213ENST00000427843 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
CAP1-213ENST00000427843 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
CAP1-213ENST00000427843 SULT6B1Q6IMI4 303 aa13.67□□□□□ -0.22
CAP1-213ENST00000427843 TRIM37O94972 964 aa13.66□□□□□ -0.22
CAP1-213ENST00000427843 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
CAP1-213ENST00000427843 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
CAP1-213ENST00000427843 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
CAP1-213ENST00000427843 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.22
CAP1-213ENST00000427843 PLSCR1O15162 318 aa13.64□□□□□ -0.23
CAP1-213ENST00000427843 PHKG2P15735 406 aa13.64□□□□□ -0.23
CAP1-213ENST00000427843 BAG6P46379 1132 aa13.64□□□□□ -0.23
CAP1-213ENST00000427843 SF3B2Q13435 895 aaKnown RBP13.64□□□□□ -0.23
CAP1-213ENST00000427843 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
CAP1-213ENST00000427843 FCHSD2O94868 740 aa13.63□□□□□ -0.23
CAP1-213ENST00000427843 CAMKK2Q96RR4 588 aa13.63□□□□□ -0.23
CAP1-213ENST00000427843 RSPH6AQ9H0K4 717 aa13.63□□□□□ -0.23
CAP1-213ENST00000427843 DOT1LQ8TEK3 1739 aa13.62□□□□□ -0.23
CAP1-213ENST00000427843 TOGARAM1Q9Y4F4 1720 aa13.62□□□□□ -0.23
CAP1-213ENST00000427843 HMOX1P09601 288 aa13.62□□□□□ -0.23
CAP1-213ENST00000427843 PTF1AQ7RTS3 328 aa13.62□□□□□ -0.23
CAP1-213ENST00000427843 ADAMTS7Q9UKP4 1686 aa13.62□□□□□ -0.23
CAP1-213ENST00000427843 KAT6BQ8WYB5 2073 aa13.61□□□□□ -0.23
CAP1-213ENST00000427843 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
CAP1-213ENST00000427843 KCNQ2O43526 872 aa13.61□□□□□ -0.23
CAP1-213ENST00000427843 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
CAP1-213ENST00000427843 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
CAP1-213ENST00000427843 BTAF1O14981 1849 aa13.61□□□□□ -0.23
CAP1-213ENST00000427843 RREB1Q92766 1687 aa13.6□□□□□ -0.23
CAP1-213ENST00000427843 APBA3O96018 575 aa13.6□□□□□ -0.23
CAP1-213ENST00000427843 ZNF530Q6P9A1 599 aaPredicted RBP13.6□□□□□ -0.23
CAP1-213ENST00000427843 DCAF5Q96JK2 942 aa13.6□□□□□ -0.23
CAP1-213ENST00000427843 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
CAP1-213ENST00000427843 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
CAP1-213ENST00000427843 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
CAP1-213ENST00000427843 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
CAP1-213ENST00000427843 ITGB4P16144 1822 aa13.59□□□□□ -0.23
CAP1-213ENST00000427843 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
CAP1-213ENST00000427843 PRKAR2BP31323 418 aa13.58□□□□□ -0.24
CAP1-213ENST00000427843 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
CAP1-213ENST00000427843 EN1Q05925 392 aaPredicted RBP13.58□□□□□ -0.24
CAP1-213ENST00000427843 MTHFSDQ2M296 383 aaKnown RBP13.58□□□□□ -0.24
CAP1-213ENST00000427843 GAS2L2Q8NHY3 880 aa13.58□□□□□ -0.24
CAP1-213ENST00000427843 ACSBG1Q96GR2 724 aa13.58□□□□□ -0.24
CAP1-213ENST00000427843 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
CAP1-213ENST00000427843 MRC1P22897 1456 aa13.57□□□□□ -0.24
CAP1-213ENST00000427843 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
CAP1-213ENST00000427843 LY75O60449 1722 aa13.56□□□□□ -0.24
CAP1-213ENST00000427843 ANP32CO43423 234 aa13.56□□□□□ -0.24
CAP1-213ENST00000427843 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
CAP1-213ENST00000427843 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
CAP1-213ENST00000427843 PROM2Q8N271 834 aa13.56□□□□□ -0.24
CAP1-213ENST00000427843 PHACTR3Q96KR7 559 aa13.56□□□□□ -0.24
CAP1-213ENST00000427843 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
CAP1-213ENST00000427843 NUP188Q5SRE5 1749 aa13.56□□□□□ -0.24
CAP1-213ENST00000427843 PIGBQ92521 554 aa13.54□□□□□ -0.24
CAP1-213ENST00000427843 CEMIPQ8WUJ3 1361 aa13.54□□□□□ -0.24
CAP1-213ENST00000427843 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
CAP1-213ENST00000427843 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
CAP1-213ENST00000427843 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
CAP1-213ENST00000427843 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
CAP1-213ENST00000427843 SLC27A3Q5K4L6 730 aa13.53□□□□□ -0.24
CAP1-213ENST00000427843 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
CAP1-213ENST00000427843 PAPPAQ13219 1627 aa13.53□□□□□ -0.24
CAP1-213ENST00000427843 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
CAP1-213ENST00000427843 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
CAP1-213ENST00000427843 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
CAP1-213ENST00000427843 MPRIPQ6WCQ1 1025 aa13.52□□□□□ -0.25
CAP1-213ENST00000427843 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.25
CAP1-213ENST00000427843 TMOD3Q9NYL9 352 aa13.52□□□□□ -0.25
CAP1-213ENST00000427843 ZNF831Q5JPB2 1677 aa13.52□□□□□ -0.25
CAP1-213ENST00000427843 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
CAP1-213ENST00000427843 SLC52A2Q9HAB3 445 aa13.51□□□□□ -0.25
CAP1-213ENST00000427843 CABP4P57796 275 aa13.5□□□□□ -0.25
CAP1-213ENST00000427843 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
CAP1-213ENST00000427843 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
CAP1-213ENST00000427843 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
CAP1-213ENST00000427843 CICQ96RK0 1608 aaPredicted RBP13.5□□□□□ -0.25
CAP1-213ENST00000427843 NEFMP07197 916 aa13.49□□□□□ -0.25
CAP1-213ENST00000427843 WDR43Q15061 677 aaKnown RBP eCLIP13.49□□□□□ -0.25
CAP1-213ENST00000427843 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
CAP1-213ENST00000427843 CCDC184Q52MB2 194 aa13.49□□□□□ -0.25
CAP1-213ENST00000427843 PNISRQ8TF01 805 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms