RNA–Protein interactions for RNA: ENST00000427795.2

XPC-202, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-202ENST00000427795 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
XPC-202ENST00000427795 MSL1Q68DK7 614 aa17.59■□□□□ 0.41
XPC-202ENST00000427795 PCNTO95613 3336 aa17.59■□□□□ 0.41
XPC-202ENST00000427795 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.41
XPC-202ENST00000427795 ROCK2O75116 1388 aaKnown RBP17.57■□□□□ 0.4
XPC-202ENST00000427795 HSPA6P17066 643 aa17.57■□□□□ 0.4
XPC-202ENST00000427795 GPBP1L1Q9HC44 474 aaPredicted RBP17.57■□□□□ 0.4
XPC-202ENST00000427795 CCNL1Q9UK58 526 aaPredicted RBP17.57■□□□□ 0.4
XPC-202ENST00000427795 MSH5O43196 834 aa17.56■□□□□ 0.4
XPC-202ENST00000427795 IP6K1Q92551 441 aa17.56■□□□□ 0.4
XPC-202ENST00000427795 LTV1Q96GA3 475 aaPredicted RBP17.56■□□□□ 0.4
XPC-202ENST00000427795 MEGF6O75095 1541 aa17.56■□□□□ 0.4
XPC-202ENST00000427795 C5P01031 1676 aa17.55■□□□□ 0.4
XPC-202ENST00000427795 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
XPC-202ENST00000427795 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
XPC-202ENST00000427795 SLC12A5Q9H2X9 1139 aa17.53■□□□□ 0.4
XPC-202ENST00000427795 CD2APQ9Y5K6 639 aa17.53■□□□□ 0.4
XPC-202ENST00000427795 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
XPC-202ENST00000427795 A0A1W2PP64 1363 aa17.53■□□□□ 0.4
XPC-202ENST00000427795 ZCRB1Q8TBF4 217 aaKnown RBP17.52■□□□□ 0.4
XPC-202ENST00000427795 TMC1Q8TDI8 760 aa17.51■□□□□ 0.39
XPC-202ENST00000427795 USP47Q96K76 1375 aa17.51■□□□□ 0.39
XPC-202ENST00000427795 TOGARAM1Q9Y4F4 1720 aa17.5■□□□□ 0.39
XPC-202ENST00000427795 FBLN1P23142 703 aa17.5■□□□□ 0.39
XPC-202ENST00000427795 AMIGO3Q86WK7 504 aa17.5■□□□□ 0.39
XPC-202ENST00000427795 MAP3K19Q56UN5 1328 aa17.49■□□□□ 0.39
XPC-202ENST00000427795 HOXC9P31274 260 aa17.49■□□□□ 0.39
XPC-202ENST00000427795 HDGFL2Q7Z4V5 671 aaPredicted RBP17.49■□□□□ 0.39
XPC-202ENST00000427795 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
XPC-202ENST00000427795 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
XPC-202ENST00000427795 KIF3CO14782 793 aa17.47■□□□□ 0.39
XPC-202ENST00000427795 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.39
XPC-202ENST00000427795 SMIM5Q71RC9 77 aa17.46■□□□□ 0.39
XPC-202ENST00000427795 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
XPC-202ENST00000427795 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.38
XPC-202ENST00000427795 NBPF6Q5VWK0 638 aa17.45■□□□□ 0.38
XPC-202ENST00000427795 USHBP1Q8N6Y0 703 aa17.45■□□□□ 0.38
XPC-202ENST00000427795 NBPF4Q96M43 638 aa17.45■□□□□ 0.38
XPC-202ENST00000427795 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
XPC-202ENST00000427795 TERF2IPQ9NYB0 399 aa17.44■□□□□ 0.38
XPC-202ENST00000427795 FLAD1Q8NFF5 587 aa17.43■□□□□ 0.38
XPC-202ENST00000427795 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
XPC-202ENST00000427795 ITGB4P16144 1822 aa17.42■□□□□ 0.38
XPC-202ENST00000427795 AMPHP49418 695 aa17.42■□□□□ 0.38
XPC-202ENST00000427795 DNAJC5GQ8N7S2 189 aa17.42■□□□□ 0.38
XPC-202ENST00000427795 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
XPC-202ENST00000427795 COG3Q96JB2 828 aa17.4■□□□□ 0.38
XPC-202ENST00000427795 CGNL1Q0VF96 1302 aa17.4■□□□□ 0.38
XPC-202ENST00000427795 MAP2P11137 1827 aaKnown RBP17.4■□□□□ 0.38
XPC-202ENST00000427795 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
XPC-202ENST00000427795 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
XPC-202ENST00000427795 PHF14O94880 888 aa17.39■□□□□ 0.37
XPC-202ENST00000427795 APLP1P51693 650 aa17.39■□□□□ 0.37
XPC-202ENST00000427795 RRS1Q15050 365 aaKnown RBP17.39■□□□□ 0.37
XPC-202ENST00000427795 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
XPC-202ENST00000427795 CARD11Q9BXL7 1154 aa17.39■□□□□ 0.37
XPC-202ENST00000427795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.38■□□□□ 0.37
XPC-202ENST00000427795 AK7Q96M32 723 aa17.38■□□□□ 0.37
XPC-202ENST00000427795 CYP27B1O15528 508 aa17.37■□□□□ 0.37
XPC-202ENST00000427795 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
XPC-202ENST00000427795 PCDH11XQ9BZA7 1347 aa17.37■□□□□ 0.37
XPC-202ENST00000427795 PCDH11YQ9BZA8 1340 aa17.37■□□□□ 0.37
XPC-202ENST00000427795 KIF13BQ9NQT8 1826 aa17.36■□□□□ 0.37
XPC-202ENST00000427795 PUS7Q96PZ0 661 aaKnown RBP17.36■□□□□ 0.37
XPC-202ENST00000427795 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
XPC-202ENST00000427795 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
XPC-202ENST00000427795 LINC00116Q8NCU8 138 aa17.35■□□□□ 0.37
XPC-202ENST00000427795 PXDNLA1KZ92 1463 aa17.35■□□□□ 0.37
XPC-202ENST00000427795 PKD1L3Q7Z443 1732 aa17.34■□□□□ 0.37
XPC-202ENST00000427795 PIGBQ92521 554 aa17.34■□□□□ 0.37
XPC-202ENST00000427795 WDR90Q96KV7 1748 aa17.34■□□□□ 0.37
XPC-202ENST00000427795 TOMM70O94826 608 aa17.33■□□□□ 0.36
XPC-202ENST00000427795 SSFA2P28290 1259 aa17.33■□□□□ 0.36
XPC-202ENST00000427795 SMARCC1Q92922 1105 aaPredicted RBP17.33■□□□□ 0.36
XPC-202ENST00000427795 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
XPC-202ENST00000427795 NSD3Q9BZ95 1437 aa17.32■□□□□ 0.36
XPC-202ENST00000427795 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
XPC-202ENST00000427795 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
XPC-202ENST00000427795 TESK2Q96S53 571 aa17.32■□□□□ 0.36
XPC-202ENST00000427795 NMRK2Q9NPI5 230 aa17.32■□□□□ 0.36
XPC-202ENST00000427795 GGNBP2Q9H3C7 697 aa17.31■□□□□ 0.36
XPC-202ENST00000427795 INSRP06213 1382 aa17.3■□□□□ 0.36
XPC-202ENST00000427795 LOC102724428A0A0B4J2F2 783 aa17.3■□□□□ 0.36
XPC-202ENST00000427795 FYB1O15117 783 aa17.3■□□□□ 0.36
XPC-202ENST00000427795 MMP10P09238 476 aa17.3■□□□□ 0.36
XPC-202ENST00000427795 SIK1P57059 783 aa17.3■□□□□ 0.36
XPC-202ENST00000427795 HTRA3P83110 453 aa17.3■□□□□ 0.36
XPC-202ENST00000427795 ITPK1Q13572 414 aa17.3■□□□□ 0.36
XPC-202ENST00000427795 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
XPC-202ENST00000427795 BRCA1P38398 1863 aaKnown RBP17.3■□□□□ 0.36
XPC-202ENST00000427795 GNPATO15228 680 aa17.29■□□□□ 0.36
XPC-202ENST00000427795 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
XPC-202ENST00000427795 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
XPC-202ENST00000427795 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.36
XPC-202ENST00000427795 ASAP1Q9ULH1 1129 aa17.27■□□□□ 0.36
XPC-202ENST00000427795 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
XPC-202ENST00000427795 NCAPD2Q15021 1401 aa17.27■□□□□ 0.35
XPC-202ENST00000427795 FLT4P35916 1363 aa17.27■□□□□ 0.35
XPC-202ENST00000427795 KIF20BQ96Q89 1820 aa17.26■□□□□ 0.35
XPC-202ENST00000427795 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms