RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
RFX3-AS1-202ENST00000427722 IP6K1Q92551 441 aa12.75□□□□□ -0.37
RFX3-AS1-202ENST00000427722 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
RFX3-AS1-202ENST00000427722 LRRC37A3O60309 1634 aa12.74□□□□□ -0.37
RFX3-AS1-202ENST00000427722 OVOS2A0A0G2JMS6 1433 aa12.74□□□□□ -0.37
RFX3-AS1-202ENST00000427722 RTL1A6NKG5 1358 aa12.74□□□□□ -0.37
RFX3-AS1-202ENST00000427722 HOXC9P31274 260 aa12.74□□□□□ -0.37
RFX3-AS1-202ENST00000427722 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
RFX3-AS1-202ENST00000427722 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
RFX3-AS1-202ENST00000427722 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
RFX3-AS1-202ENST00000427722 PARP4Q9UKK3 1724 aaKnown RBP12.72□□□□□ -0.37
RFX3-AS1-202ENST00000427722 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
RFX3-AS1-202ENST00000427722 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.37
RFX3-AS1-202ENST00000427722 IL2RBP14784 551 aa12.71□□□□□ -0.37
RFX3-AS1-202ENST00000427722 PANK3Q9H999 370 aa12.71□□□□□ -0.37
RFX3-AS1-202ENST00000427722 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
RFX3-AS1-202ENST00000427722 LTN1O94822 1766 aa12.71□□□□□ -0.38
RFX3-AS1-202ENST00000427722 APBA3O96018 575 aa12.7□□□□□ -0.38
RFX3-AS1-202ENST00000427722 MARCH10Q8NA82 808 aaPredicted RBP12.7□□□□□ -0.38
RFX3-AS1-202ENST00000427722 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
RFX3-AS1-202ENST00000427722 FLT4P35916 1363 aa12.69□□□□□ -0.38
RFX3-AS1-202ENST00000427722 KIF7Q2M1P5 1343 aa12.69□□□□□ -0.38
RFX3-AS1-202ENST00000427722 EXOC5O00471 708 aa12.69□□□□□ -0.38
RFX3-AS1-202ENST00000427722 CLCN6P51797 869 aa12.69□□□□□ -0.38
RFX3-AS1-202ENST00000427722 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
RFX3-AS1-202ENST00000427722 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
RFX3-AS1-202ENST00000427722 RGPD1P0DJD0 1748 aa12.68□□□□□ -0.38
RFX3-AS1-202ENST00000427722 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
RFX3-AS1-202ENST00000427722 EZH2Q15910 746 aaKnown RBP12.68□□□□□ -0.38
RFX3-AS1-202ENST00000427722 HSP90AB2PQ58FF8 381 aa12.68□□□□□ -0.38
RFX3-AS1-202ENST00000427722 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
RFX3-AS1-202ENST00000427722 KIF20BQ96Q89 1820 aa12.67□□□□□ -0.38
RFX3-AS1-202ENST00000427722 WNK3Q9BYP7 1800 aa12.67□□□□□ -0.38
RFX3-AS1-202ENST00000427722 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
RFX3-AS1-202ENST00000427722 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
RFX3-AS1-202ENST00000427722 INSRP06213 1382 aa12.67□□□□□ -0.38
RFX3-AS1-202ENST00000427722 KIF24Q5T7B8 1368 aa12.67□□□□□ -0.38
RFX3-AS1-202ENST00000427722 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
RFX3-AS1-202ENST00000427722 USHBP1Q8N6Y0 703 aa12.66□□□□□ -0.38
RFX3-AS1-202ENST00000427722 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
RFX3-AS1-202ENST00000427722 PARD3Q8TEW0 1356 aa12.66□□□□□ -0.38
RFX3-AS1-202ENST00000427722 BCL9O00512 1426 aa12.65□□□□□ -0.38
RFX3-AS1-202ENST00000427722 PSDA5PKW4 1024 aaPredicted RBP12.65□□□□□ -0.38
RFX3-AS1-202ENST00000427722 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
RFX3-AS1-202ENST00000427722 PTF1AQ7RTS3 328 aa12.65□□□□□ -0.38
RFX3-AS1-202ENST00000427722 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
RFX3-AS1-202ENST00000427722 MEGF6O75095 1541 aa12.65□□□□□ -0.38
RFX3-AS1-202ENST00000427722 NSD2O96028 1365 aa12.65□□□□□ -0.38
RFX3-AS1-202ENST00000427722 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
RFX3-AS1-202ENST00000427722 KNSTRNQ9Y448 316 aa12.64□□□□□ -0.39
RFX3-AS1-202ENST00000427722 DDX54Q8TDD1 881 aaKnown RBP12.63□□□□□ -0.39
RFX3-AS1-202ENST00000427722 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
RFX3-AS1-202ENST00000427722 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
RFX3-AS1-202ENST00000427722 FAM208AQ9UK61 1670 aaKnown RBP12.63□□□□□ -0.39
RFX3-AS1-202ENST00000427722 RAPGEF4Q8WZA2 1011 aa12.62□□□□□ -0.39
RFX3-AS1-202ENST00000427722 KCNQ2O43526 872 aa12.61□□□□□ -0.39
RFX3-AS1-202ENST00000427722 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
RFX3-AS1-202ENST00000427722 MORC1Q86VD1 984 aa12.61□□□□□ -0.39
RFX3-AS1-202ENST00000427722 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
RFX3-AS1-202ENST00000427722 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
RFX3-AS1-202ENST00000427722 ZCRB1Q8TBF4 217 aaKnown RBP12.6□□□□□ -0.39
RFX3-AS1-202ENST00000427722 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
RFX3-AS1-202ENST00000427722 TATP17735 454 aaPredicted RBP12.59□□□□□ -0.39
RFX3-AS1-202ENST00000427722 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
RFX3-AS1-202ENST00000427722 PHF12Q96QT6 1004 aa12.59□□□□□ -0.39
RFX3-AS1-202ENST00000427722 EIF4A2Q14240 407 aaKnown RBP12.58□□□□□ -0.4
RFX3-AS1-202ENST00000427722 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
RFX3-AS1-202ENST00000427722 ANKRD26Q9UPS8 1709 aa12.58□□□□□ -0.4
RFX3-AS1-202ENST00000427722 NCAPD2Q15021 1401 aa12.57□□□□□ -0.4
RFX3-AS1-202ENST00000427722 PLSCR1O15162 318 aa12.57□□□□□ -0.4
RFX3-AS1-202ENST00000427722 CC2D1BQ5T0F9 858 aaKnown RBP12.57□□□□□ -0.4
RFX3-AS1-202ENST00000427722 NBPF14Q5TI25 921 aa12.57□□□□□ -0.4
RFX3-AS1-202ENST00000427722 EYA1Q99502 592 aa12.57□□□□□ -0.4
RFX3-AS1-202ENST00000427722 PCDH11XQ9BZA7 1347 aa12.57□□□□□ -0.4
RFX3-AS1-202ENST00000427722 PCDH11YQ9BZA8 1340 aa12.57□□□□□ -0.4
RFX3-AS1-202ENST00000427722 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
RFX3-AS1-202ENST00000427722 TXNRD1Q16881 649 aa12.56□□□□□ -0.4
RFX3-AS1-202ENST00000427722 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
RFX3-AS1-202ENST00000427722 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
RFX3-AS1-202ENST00000427722 RREB1Q92766 1687 aa12.56□□□□□ -0.4
RFX3-AS1-202ENST00000427722 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
RFX3-AS1-202ENST00000427722 NUP188Q5SRE5 1749 aa12.55□□□□□ -0.4
RFX3-AS1-202ENST00000427722 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
RFX3-AS1-202ENST00000427722 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
RFX3-AS1-202ENST00000427722 RGPD2P0DJD1 1756 aa12.54□□□□□ -0.4
RFX3-AS1-202ENST00000427722 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
RFX3-AS1-202ENST00000427722 GALR2O43603 387 aaPredicted RBP12.53□□□□□ -0.4
RFX3-AS1-202ENST00000427722 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
RFX3-AS1-202ENST00000427722 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
RFX3-AS1-202ENST00000427722 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
RFX3-AS1-202ENST00000427722 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
RFX3-AS1-202ENST00000427722 CYP27B1O15528 508 aa12.52□□□□□ -0.41
RFX3-AS1-202ENST00000427722 NUBP1P53384 320 aa12.52□□□□□ -0.41
RFX3-AS1-202ENST00000427722 SPG7Q9UQ90 795 aa12.52□□□□□ -0.41
RFX3-AS1-202ENST00000427722 SBF2Q86WG5 1849 aa12.52□□□□□ -0.41
RFX3-AS1-202ENST00000427722 SHANK3Q9BYB0 1731 aa12.51□□□□□ -0.41
RFX3-AS1-202ENST00000427722 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
RFX3-AS1-202ENST00000427722 MTHFSP49914 203 aa12.51□□□□□ -0.41
RFX3-AS1-202ENST00000427722 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
RFX3-AS1-202ENST00000427722 STK32BQ9NY57 414 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms