RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 IL27Q8NEV9 243 aa10.96□□□□□ -0.65
LINC00458-202ENST00000427299 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
LINC00458-202ENST00000427299 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
LINC00458-202ENST00000427299 ARHGEF15O94989 841 aa10.94□□□□□ -0.66
LINC00458-202ENST00000427299 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
LINC00458-202ENST00000427299 PRICKLE2Q7Z3G6 844 aa10.94□□□□□ -0.66
LINC00458-202ENST00000427299 CCDC125Q86Z20 511 aa10.94□□□□□ -0.66
LINC00458-202ENST00000427299 RNF225M0QZC1 329 aaPredicted RBP10.93□□□□□ -0.66
LINC00458-202ENST00000427299 GPR37L1O60883 481 aa10.93□□□□□ -0.66
LINC00458-202ENST00000427299 RASSF7Q02833 373 aa10.93□□□□□ -0.66
LINC00458-202ENST00000427299 RHOQP17081 205 aa10.92□□□□□ -0.66
LINC00458-202ENST00000427299 GPC1P35052 558 aa10.92□□□□□ -0.66
LINC00458-202ENST00000427299 GAS6Q14393 721 aa10.92□□□□□ -0.66
LINC00458-202ENST00000427299 TMEM151AQ8N4L1 468 aa10.92□□□□□ -0.66
LINC00458-202ENST00000427299 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
LINC00458-202ENST00000427299 NR1H3Q13133 447 aa10.91□□□□□ -0.66
LINC00458-202ENST00000427299 CC2D2BQ6DHV5 1058 aa10.91□□□□□ -0.66
LINC00458-202ENST00000427299 A0A1W2PRU2 124 aa10.9□□□□□ -0.66
LINC00458-202ENST00000427299 SOCS7O14512 581 aa10.9□□□□□ -0.66
LINC00458-202ENST00000427299 GDF11O95390 407 aa10.9□□□□□ -0.66
LINC00458-202ENST00000427299 SRSF11Q05519 484 aaKnown RBP10.9□□□□□ -0.66
LINC00458-202ENST00000427299 RNF20Q5VTR2 975 aa10.9□□□□□ -0.66
LINC00458-202ENST00000427299 MEN1O00255 615 aa10.89□□□□□ -0.67
LINC00458-202ENST00000427299 MCCD1P59942 119 aaPredicted RBP10.89□□□□□ -0.67
LINC00458-202ENST00000427299 ZNF837Q96EG3 531 aaPredicted RBP10.89□□□□□ -0.67
LINC00458-202ENST00000427299 SCTRP47872 440 aa10.88□□□□□ -0.67
LINC00458-202ENST00000427299 TRIM22Q8IYM9 498 aa10.88□□□□□ -0.67
LINC00458-202ENST00000427299 MTMR14Q8NCE2 650 aa10.88□□□□□ -0.67
LINC00458-202ENST00000427299 BANK1Q8NDB2 785 aa10.88□□□□□ -0.67
LINC00458-202ENST00000427299 BRPF1P55201 1214 aaPredicted RBP10.87□□□□□ -0.67
LINC00458-202ENST00000427299 GMCL1Q96IK5 515 aa10.87□□□□□ -0.67
LINC00458-202ENST00000427299 CLN3Q13286 438 aa10.86□□□□□ -0.67
LINC00458-202ENST00000427299 LYPD4Q6UWN0 246 aa10.86□□□□□ -0.67
LINC00458-202ENST00000427299 CYP2U1Q7Z449 544 aa10.86□□□□□ -0.67
LINC00458-202ENST00000427299 TRAK2O60296 914 aa10.85□□□□□ -0.67
LINC00458-202ENST00000427299 DBN1Q16643 649 aa10.85□□□□□ -0.67
LINC00458-202ENST00000427299 ZNF592Q92610 1267 aa10.85□□□□□ -0.67
LINC00458-202ENST00000427299 GRIP2Q9C0E4 1043 aa10.85□□□□□ -0.67
LINC00458-202ENST00000427299 OSBPL3Q9H4L5 887 aa10.85□□□□□ -0.67
LINC00458-202ENST00000427299 DYRK1BQ9Y463 629 aa10.85□□□□□ -0.67
LINC00458-202ENST00000427299 PCDHB11Q9Y5F2 797 aa10.84□□□□□ -0.67
LINC00458-202ENST00000427299 NDUFB9Q9Y6M9 179 aa10.84□□□□□ -0.67
LINC00458-202ENST00000427299 CELA2BP08218 269 aaPredicted RBP10.83□□□□□ -0.68
LINC00458-202ENST00000427299 POU4F2Q12837 409 aa10.83□□□□□ -0.68
LINC00458-202ENST00000427299 SLC27A3Q5K4L6 730 aa10.83□□□□□ -0.68
LINC00458-202ENST00000427299 NLRP3Q96P20 1036 aa10.83□□□□□ -0.68
LINC00458-202ENST00000427299 MBIPQ9NS73 344 aa10.83□□□□□ -0.68
LINC00458-202ENST00000427299 IRS1P35568 1242 aa10.82□□□□□ -0.68
LINC00458-202ENST00000427299 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
LINC00458-202ENST00000427299 RIPOR1Q6ZS17 1223 aa10.82□□□□□ -0.68
LINC00458-202ENST00000427299 NBPF15Q8N660 670 aa10.82□□□□□ -0.68
LINC00458-202ENST00000427299 ARHGEF10LQ9HCE6 1279 aa10.82□□□□□ -0.68
LINC00458-202ENST00000427299 ZNF330Q9Y3S2 320 aaPredicted RBP10.82□□□□□ -0.68
LINC00458-202ENST00000427299 SPATA31C2B4DYI2 1134 aa10.81□□□□□ -0.68
LINC00458-202ENST00000427299 GPR25O00155 361 aa10.81□□□□□ -0.68
LINC00458-202ENST00000427299 MARSP56192 900 aaKnown RBP10.81□□□□□ -0.68
LINC00458-202ENST00000427299 WDR44Q5JSH3 913 aa10.81□□□□□ -0.68
LINC00458-202ENST00000427299 SNRKQ9NRH2 765 aa10.81□□□□□ -0.68
LINC00458-202ENST00000427299 MAP3K10Q02779 954 aa10.8□□□□□ -0.68
LINC00458-202ENST00000427299 FOXR1Q6PIV2 292 aa10.8□□□□□ -0.68
LINC00458-202ENST00000427299 H7C1W4 665 aa10.79□□□□□ -0.68
LINC00458-202ENST00000427299 KANK3Q6NY19 840 aa10.79□□□□□ -0.68
LINC00458-202ENST00000427299 GTPBP3Q969Y2 492 aaKnown RBP10.79□□□□□ -0.68
LINC00458-202ENST00000427299 SCARF2Q96GP6 870 aaPredicted RBP10.79□□□□□ -0.68
LINC00458-202ENST00000427299 GAS2L1Q99501 681 aaPredicted RBP10.79□□□□□ -0.68
LINC00458-202ENST00000427299 DNMT3AQ9Y6K1 912 aaPredicted RBP10.79□□□□□ -0.68
LINC00458-202ENST00000427299 IGF1RP08069 1367 aa10.78□□□□□ -0.68
LINC00458-202ENST00000427299 APBB1O00213 710 aa10.78□□□□□ -0.68
LINC00458-202ENST00000427299 GNRH1P01148 92 aa10.77□□□□□ -0.69
LINC00458-202ENST00000427299 RAB6BQ9NRW1 208 aa10.77□□□□□ -0.69
LINC00458-202ENST00000427299 WASLO00401 505 aaPredicted RBP10.76□□□□□ -0.69
LINC00458-202ENST00000427299 TAS1R3Q7RTX0 852 aa10.76□□□□□ -0.69
LINC00458-202ENST00000427299 CCDC85AQ96PX6 553 aaPredicted RBP10.76□□□□□ -0.69
LINC00458-202ENST00000427299 TIMMDC1Q9NPL8 285 aa10.76□□□□□ -0.69
LINC00458-202ENST00000427299 CEP126Q9P2H0 1117 aa10.76□□□□□ -0.69
LINC00458-202ENST00000427299 IL2RAP01589 272 aa10.75□□□□□ -0.69
LINC00458-202ENST00000427299 CNKSR1Q969H4 720 aa10.75□□□□□ -0.69
LINC00458-202ENST00000427299 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
LINC00458-202ENST00000427299 ESYT1Q9BSJ8 1104 aa10.75□□□□□ -0.69
LINC00458-202ENST00000427299 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
LINC00458-202ENST00000427299 ENAMQ9NRM1 1142 aa10.75□□□□□ -0.69
LINC00458-202ENST00000427299 HRH3Q9Y5N1 445 aa10.75□□□□□ -0.69
LINC00458-202ENST00000427299 F11P03951 625 aa10.74□□□□□ -0.69
LINC00458-202ENST00000427299 ACDQ96AP0 544 aa10.74□□□□□ -0.69
LINC00458-202ENST00000427299 CDCA7Q9BWT1 371 aaPredicted RBP10.74□□□□□ -0.69
LINC00458-202ENST00000427299 THBS1P07996 1170 aa10.73□□□□□ -0.69
LINC00458-202ENST00000427299 GPAT2Q6NUI2 795 aa10.73□□□□□ -0.69
LINC00458-202ENST00000427299 NUCKS1Q9H1E3 243 aaKnown RBP10.73□□□□□ -0.69
LINC00458-202ENST00000427299 BCRP11274 1271 aa10.72□□□□□ -0.69
LINC00458-202ENST00000427299 CENPCQ03188 943 aa10.72□□□□□ -0.69
LINC00458-202ENST00000427299 MYCP01106 439 aaPredicted RBP10.71□□□□□ -0.69
LINC00458-202ENST00000427299 MX2P20592 715 aa10.71□□□□□ -0.69
LINC00458-202ENST00000427299 FHDC1Q9C0D6 1143 aaPredicted RBP10.71□□□□□ -0.69
LINC00458-202ENST00000427299 IGHA1P01876 353 aa10.7□□□□□ -0.7
LINC00458-202ENST00000427299 XAGE2Q96GT9 111 aa10.7□□□□□ -0.7
LINC00458-202ENST00000427299 LRRC4BQ9NT99 713 aa10.7□□□□□ -0.7
LINC00458-202ENST00000427299 TBC1D2BQ9UPU7 963 aa10.7□□□□□ -0.7
LINC00458-202ENST00000427299 FOXK2Q01167 660 aa10.69□□□□□ -0.7
LINC00458-202ENST00000427299 CNTNAP5Q8WYK1 1306 aa10.68□□□□□ -0.7
LINC00458-202ENST00000427299 PHTF2Q8N3S3 785 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms