RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
SNX3-204ENST00000426155 RGPD3A6NKT7 1758 aaPredicted RBP18.68■□□□□ 0.58
SNX3-204ENST00000426155 RGPD4Q7Z3J3 1758 aa18.68■□□□□ 0.58
SNX3-204ENST00000426155 APBA3O96018 575 aa18.68■□□□□ 0.58
SNX3-204ENST00000426155 EZH2Q15910 746 aaKnown RBP18.68■□□□□ 0.58
SNX3-204ENST00000426155 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
SNX3-204ENST00000426155 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
SNX3-204ENST00000426155 MORC1Q86VD1 984 aa18.67■□□□□ 0.58
SNX3-204ENST00000426155 BTAF1O14981 1849 aa18.67■□□□□ 0.58
SNX3-204ENST00000426155 PKD1L3Q7Z443 1732 aa18.66■□□□□ 0.58
SNX3-204ENST00000426155 BCL9O00512 1426 aa18.66■□□□□ 0.58
SNX3-204ENST00000426155 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
SNX3-204ENST00000426155 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.57
SNX3-204ENST00000426155 ACSBG1Q96GR2 724 aa18.64■□□□□ 0.57
SNX3-204ENST00000426155 CAMKK2Q96RR4 588 aa18.64■□□□□ 0.57
SNX3-204ENST00000426155 NCAPD2Q15021 1401 aa18.64■□□□□ 0.57
SNX3-204ENST00000426155 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
SNX3-204ENST00000426155 DDX54Q8TDD1 881 aaKnown RBP18.63■□□□□ 0.57
SNX3-204ENST00000426155 KCNQ2O43526 872 aa18.62■□□□□ 0.57
SNX3-204ENST00000426155 EIF4A2Q14240 407 aaKnown RBP18.62■□□□□ 0.57
SNX3-204ENST00000426155 TOGARAM1Q9Y4F4 1720 aa18.62■□□□□ 0.57
SNX3-204ENST00000426155 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
SNX3-204ENST00000426155 EYA1Q99502 592 aa18.6■□□□□ 0.57
SNX3-204ENST00000426155 BCL11BQ9C0K0 894 aaPredicted RBP18.6■□□□□ 0.57
SNX3-204ENST00000426155 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
SNX3-204ENST00000426155 PSDA5PKW4 1024 aaPredicted RBP18.59■□□□□ 0.57
SNX3-204ENST00000426155 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
SNX3-204ENST00000426155 ZCRB1Q8TBF4 217 aaKnown RBP18.59■□□□□ 0.57
SNX3-204ENST00000426155 ITGB4P16144 1822 aa18.56■□□□□ 0.56
SNX3-204ENST00000426155 IGSF1Q8N6C5 1336 aa18.55■□□□□ 0.56
SNX3-204ENST00000426155 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
SNX3-204ENST00000426155 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
SNX3-204ENST00000426155 R3HDM1Q15032 1099 aaKnown RBP18.54■□□□□ 0.56
SNX3-204ENST00000426155 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
SNX3-204ENST00000426155 PCDH11XQ9BZA7 1347 aa18.53■□□□□ 0.56
SNX3-204ENST00000426155 PCDH11YQ9BZA8 1340 aa18.53■□□□□ 0.56
SNX3-204ENST00000426155 PLSCR1O15162 318 aa18.53■□□□□ 0.56
SNX3-204ENST00000426155 MTHFSP49914 203 aa18.53■□□□□ 0.56
SNX3-204ENST00000426155 LY75O60449 1722 aa18.52■□□□□ 0.56
SNX3-204ENST00000426155 CYP27B1O15528 508 aa18.52■□□□□ 0.56
SNX3-204ENST00000426155 AEBP1Q8IUX7 1158 aa18.52■□□□□ 0.56
SNX3-204ENST00000426155 PROM2Q8N271 834 aa18.52■□□□□ 0.56
SNX3-204ENST00000426155 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
SNX3-204ENST00000426155 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
SNX3-204ENST00000426155 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.55
SNX3-204ENST00000426155 IL13P35225 146 aa18.5■□□□□ 0.55
SNX3-204ENST00000426155 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
SNX3-204ENST00000426155 ANO8Q9HCE9 1232 aaPredicted RBP18.5■□□□□ 0.55
SNX3-204ENST00000426155 KCNA4P22459 653 aa18.49■□□□□ 0.55
SNX3-204ENST00000426155 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
SNX3-204ENST00000426155 LRP5O75197 1615 aa18.49■□□□□ 0.55
SNX3-204ENST00000426155 VIRMAQ69YN4 1812 aaKnown RBP18.48■□□□□ 0.55
SNX3-204ENST00000426155 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
SNX3-204ENST00000426155 CACNB1Q02641 598 aaPredicted RBP18.47■□□□□ 0.55
SNX3-204ENST00000426155 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
SNX3-204ENST00000426155 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
SNX3-204ENST00000426155 KDRP35968 1356 aa18.46■□□□□ 0.55
SNX3-204ENST00000426155 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.55
SNX3-204ENST00000426155 PHKG2P15735 406 aa18.44■□□□□ 0.54
SNX3-204ENST00000426155 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
SNX3-204ENST00000426155 HMOX1P09601 288 aa18.43■□□□□ 0.54
SNX3-204ENST00000426155 KCNQ4P56696 695 aa18.43■□□□□ 0.54
SNX3-204ENST00000426155 LRRC4BQ9NT99 713 aa18.43■□□□□ 0.54
SNX3-204ENST00000426155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.43■□□□□ 0.54
SNX3-204ENST00000426155 TAF1LQ8IZX4 1826 aa18.43■□□□□ 0.54
SNX3-204ENST00000426155 C5P01031 1676 aa18.43■□□□□ 0.54
SNX3-204ENST00000426155 DIAPH1O60610 1272 aaKnown RBP18.42■□□□□ 0.54
SNX3-204ENST00000426155 MPRIPQ6WCQ1 1025 aa18.42■□□□□ 0.54
SNX3-204ENST00000426155 SCN11AQ9UI33 1791 aa18.42■□□□□ 0.54
SNX3-204ENST00000426155 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
SNX3-204ENST00000426155 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
SNX3-204ENST00000426155 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
SNX3-204ENST00000426155 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
SNX3-204ENST00000426155 PDGFDQ9GZP0 370 aaPredicted RBP18.41■□□□□ 0.54
SNX3-204ENST00000426155 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
SNX3-204ENST00000426155 ZNF530Q6P9A1 599 aaPredicted RBP18.4■□□□□ 0.54
SNX3-204ENST00000426155 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
SNX3-204ENST00000426155 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
SNX3-204ENST00000426155 ZNF827Q17R98 1081 aa18.39■□□□□ 0.53
SNX3-204ENST00000426155 PLEKHO1Q53GL0 409 aaPredicted RBP18.39■□□□□ 0.53
SNX3-204ENST00000426155 PIGBQ92521 554 aa18.38■□□□□ 0.53
SNX3-204ENST00000426155 STK32BQ9NY57 414 aa18.38■□□□□ 0.53
SNX3-204ENST00000426155 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
SNX3-204ENST00000426155 U2SURPO15042 1029 aaKnown RBP18.37■□□□□ 0.53
SNX3-204ENST00000426155 SLC15A2Q16348 729 aa18.37■□□□□ 0.53
SNX3-204ENST00000426155 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
SNX3-204ENST00000426155 CCNL1Q9UK58 526 aaPredicted RBP18.36■□□□□ 0.53
SNX3-204ENST00000426155 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
SNX3-204ENST00000426155 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
SNX3-204ENST00000426155 TMOD3Q9NYL9 352 aa18.35■□□□□ 0.53
SNX3-204ENST00000426155 C4BP0C0L5 1744 aa18.34■□□□□ 0.53
SNX3-204ENST00000426155 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
SNX3-204ENST00000426155 C1orf141Q5JVX7 400 aa18.33■□□□□ 0.52
SNX3-204ENST00000426155 AKT1S1Q96B36 256 aa18.33■□□□□ 0.52
SNX3-204ENST00000426155 CFAP53Q96M91 514 aa18.33■□□□□ 0.52
SNX3-204ENST00000426155 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
SNX3-204ENST00000426155 ASAP1Q9ULH1 1129 aa18.32■□□□□ 0.52
SNX3-204ENST00000426155 ZBTB7AO95365 584 aa18.31■□□□□ 0.52
SNX3-204ENST00000426155 MTHFSDQ2M296 383 aaKnown RBP18.31■□□□□ 0.52
SNX3-204ENST00000426155 UBR3Q6ZT12 1888 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms