RNA–Protein interactions for RNA: ENST00000426105.6

PUM1-206, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUM1, Length 4,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-206ENST00000426105 NEXMIFQ5QGS0 1516 aa8.54□□□□□ -1.04
PUM1-206ENST00000426105 SPATA31A1Q5TZJ5 1347 aa8.54□□□□□ -1.04
PUM1-206ENST00000426105 UPF1Q92900 1129 aaKnown RBP eCLIP8.54□□□□□ -1.04
PUM1-206ENST00000426105 SMARCC1Q92922 1105 aaPredicted RBP8.54□□□□□ -1.04
PUM1-206ENST00000426105 MYBBP1AQ9BQG0 1328 aaKnown RBP8.53□□□□□ -1.04
PUM1-206ENST00000426105 PCDH11XQ9BZA7 1347 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 PCDH11YQ9BZA8 1340 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 PTCH1Q13635 1447 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 MTHFSDQ2M296 383 aaKnown RBP8.53□□□□□ -1.04
PUM1-206ENST00000426105 RGS17Q9UGC6 210 aaPredicted RBP8.53□□□□□ -1.04
PUM1-206ENST00000426105 TECPR2O15040 1411 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 PLIN1O60240 522 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 OS9Q13438 667 aaPredicted RBP8.53□□□□□ -1.04
PUM1-206ENST00000426105 FNBP4Q8N3X1 1017 aaPredicted RBP8.53□□□□□ -1.04
PUM1-206ENST00000426105 TSR2Q969E8 191 aaKnown RBP8.53□□□□□ -1.04
PUM1-206ENST00000426105 FKBP5Q13451 457 aaPredicted RBP8.53□□□□□ -1.04
PUM1-206ENST00000426105 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 DNAJC10Q8IXB1 793 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 MED14O60244 1454 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 SPATA31A5Q5VU36 1347 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 SPATA31A7Q8IWB4 1347 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 TMEM131LA2VDJ0 1609 aa8.53□□□□□ -1.04
PUM1-206ENST00000426105 IRX6P78412 446 aaPredicted RBP8.52□□□□□ -1.04
PUM1-206ENST00000426105 HDGFL1Q5TGJ6 251 aa8.52□□□□□ -1.04
PUM1-206ENST00000426105 KIF6Q6ZMV9 814 aa8.52□□□□□ -1.04
PUM1-206ENST00000426105 SPON1Q9HCB6 807 aa8.52□□□□□ -1.04
PUM1-206ENST00000426105 FTSJ3Q8IY81 847 aaKnown RBP8.52□□□□□ -1.05
PUM1-206ENST00000426105 EDC4Q6P2E9 1401 aaKnown RBP8.52□□□□□ -1.05
PUM1-206ENST00000426105 JARID2Q92833 1246 aaPredicted RBP8.52□□□□□ -1.05
PUM1-206ENST00000426105 PHACTR3Q96KR7 559 aa8.52□□□□□ -1.05
PUM1-206ENST00000426105 SBNO1A3KN83 1393 aa8.52□□□□□ -1.05
PUM1-206ENST00000426105 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
PUM1-206ENST00000426105 PAXIP1Q6ZW49 1069 aaPredicted RBP8.51□□□□□ -1.05
PUM1-206ENST00000426105 SRCAPQ6ZRS2 3230 aa8.51□□□□□ -1.05
PUM1-206ENST00000426105 CALD1Q05682 793 aaKnown RBP8.51□□□□□ -1.05
PUM1-206ENST00000426105 PARP3Q9Y6F1 533 aa8.51□□□□□ -1.05
PUM1-206ENST00000426105 LOC102724428A0A0B4J2F2 783 aa8.51□□□□□ -1.05
PUM1-206ENST00000426105 SIK1P57059 783 aa8.51□□□□□ -1.05
PUM1-206ENST00000426105 AMER1Q5JTC6 1135 aaPredicted RBP8.51□□□□□ -1.05
PUM1-206ENST00000426105 UBR1Q8IWV7 1749 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 CCDC184Q52MB2 194 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 RALGAPBQ86X10 1494 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 MYOM2P54296 1465 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 A1BGP04217 495 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 RUNDC1Q96C34 613 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 FMNL2Q96PY5 1086 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 NEXNQ0ZGT2 675 aa8.5□□□□□ -1.05
PUM1-206ENST00000426105 ANKARQ7Z5J8 1434 aa8.49□□□□□ -1.05
PUM1-206ENST00000426105 ASXL1Q8IXJ9 1541 aa8.49□□□□□ -1.05
PUM1-206ENST00000426105 NBPF5PQ86XG9 351 aaPredicted RBP8.49□□□□□ -1.05
PUM1-206ENST00000426105 SMC4Q9NTJ3 1288 aa8.49□□□□□ -1.05
PUM1-206ENST00000426105 BRD4O60885 1362 aaPredicted RBP8.49□□□□□ -1.05
PUM1-206ENST00000426105 CYP27B1O15528 508 aa8.49□□□□□ -1.05
PUM1-206ENST00000426105 ATP5J2-PTCD1G3V325 749 aa8.49□□□□□ -1.05
PUM1-206ENST00000426105 FCHSD2O94868 740 aa8.49□□□□□ -1.05
PUM1-206ENST00000426105 PIGBQ92521 554 aa8.49□□□□□ -1.05
PUM1-206ENST00000426105 C9orf78Q9NZ63 289 aaPredicted RBP8.48□□□□□ -1.05
PUM1-206ENST00000426105 THRAP3Q9Y2W1 955 aaKnown RBP8.48□□□□□ -1.05
PUM1-206ENST00000426105 NINLQ9Y2I6 1382 aa8.48□□□□□ -1.05
PUM1-206ENST00000426105 DIP2AQ14689 1571 aa8.48□□□□□ -1.05
PUM1-206ENST00000426105 KCNJ4P48050 445 aa8.48□□□□□ -1.05
PUM1-206ENST00000426105 KRT24Q2M2I5 525 aa8.48□□□□□ -1.05
PUM1-206ENST00000426105 ARHGAP27Q6ZUM4 889 aa8.48□□□□□ -1.05
PUM1-206ENST00000426105 DCCP43146 1447 aa8.48□□□□□ -1.05
PUM1-206ENST00000426105 TAF7Q15545 349 aaPredicted RBP8.48□□□□□ -1.05
PUM1-206ENST00000426105 NEURL4Q96JN8 1562 aa8.48□□□□□ -1.05
PUM1-206ENST00000426105 NCOA3Q9Y6Q9 1424 aa8.47□□□□□ -1.05
PUM1-206ENST00000426105 POLR3AO14802 1390 aaPredicted RBP8.47□□□□□ -1.05
PUM1-206ENST00000426105 SBNO2Q9Y2G9 1366 aa8.47□□□□□ -1.05
PUM1-206ENST00000426105 MYO5BQ9ULV0 1848 aa8.47□□□□□ -1.05
PUM1-206ENST00000426105 PHKG2P15735 406 aa8.47□□□□□ -1.05
PUM1-206ENST00000426105 AKAP4Q5JQC9 854 aa8.47□□□□□ -1.05
PUM1-206ENST00000426105 ZNF496Q96IT1 587 aaPredicted RBP8.47□□□□□ -1.05
PUM1-206ENST00000426105 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
PUM1-206ENST00000426105 NIP7Q9Y221 180 aaKnown RBP eCLIP8.47□□□□□ -1.052e-60■■■■■ 52.7
PUM1-206ENST00000426105 KCNQ3O43525 872 aa8.47□□□□□ -1.05
PUM1-206ENST00000426105 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
PUM1-206ENST00000426105 SRP68Q9UHB9 627 aaKnown RBP8.47□□□□□ -1.05
PUM1-206ENST00000426105 NFE2L2Q16236 605 aa8.46□□□□□ -1.05
PUM1-206ENST00000426105 SSH2Q76I76 1423 aa8.46□□□□□ -1.05
PUM1-206ENST00000426105 MMP10P09238 476 aa8.46□□□□□ -1.05
PUM1-206ENST00000426105 TMPOP42166 694 aaKnown RBP8.46□□□□□ -1.05
PUM1-206ENST00000426105 RNMTO43148 476 aaKnown RBP8.46□□□□□ -1.06
PUM1-206ENST00000426105 DZIP3Q86Y13 1208 aaKnown RBP8.46□□□□□ -1.06
PUM1-206ENST00000426105 CLEC11AQ9Y240 323 aa8.46□□□□□ -1.06
PUM1-206ENST00000426105 CRB1P82279 1406 aa8.46□□□□□ -1.06
PUM1-206ENST00000426105 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
PUM1-206ENST00000426105 DDX58O95786 925 aaKnown RBP8.45□□□□□ -1.06
PUM1-206ENST00000426105 TRMT112Q9UI30 125 aaKnown RBP8.45□□□□□ -1.06
PUM1-206ENST00000426105 GORABQ5T7V8 394 aa8.45□□□□□ -1.06
PUM1-206ENST00000426105 ZNF652Q9Y2D9 606 aa8.45□□□□□ -1.06
PUM1-206ENST00000426105 SLC4A2P04920 1241 aa8.45□□□□□ -1.06
PUM1-206ENST00000426105 GNAI1P63096 354 aa8.45□□□□□ -1.06
PUM1-206ENST00000426105 ATP7BP35670 1465 aa8.45□□□□□ -1.06
PUM1-206ENST00000426105 TULP4Q9NRJ4 1543 aa8.45□□□□□ -1.06
PUM1-206ENST00000426105 USPL1Q5W0Q7 1092 aa8.45□□□□□ -1.06
PUM1-206ENST00000426105 SNRPA1P09661 255 aaKnown RBP8.44□□□□□ -1.06
PUM1-206ENST00000426105 IL13P35225 146 aa8.44□□□□□ -1.06
PUM1-206ENST00000426105 RPGRQ92834 1020 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms