RNA–Protein interactions for RNA: ENST00000425986.1

RTN4R-203, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 2

Gene RTN4R, Length 1,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-203ENST00000425986 C8orf58Q8NAV2 365 aa23.25■■□□□ 1.31
RTN4R-203ENST00000425986 SPATA31A3Q5VYP0 1347 aa23.25■■□□□ 1.31
RTN4R-203ENST00000425986 AAMPQ13685 434 aa23.25■■□□□ 1.31
RTN4R-203ENST00000425986 TWISTNBQ3B726 338 aaPredicted RBP23.25■■□□□ 1.31
RTN4R-203ENST00000425986 CLUAP1Q96AJ1 413 aa23.25■■□□□ 1.31
RTN4R-203ENST00000425986 NOB1Q9ULX3 412 aaKnown RBP23.25■■□□□ 1.31
RTN4R-203ENST00000425986 GNAT3A8MTJ3 354 aa23.24■■□□□ 1.31
RTN4R-203ENST00000425986 ZC3H6P61129 1189 aaKnown RBP23.24■■□□□ 1.31
RTN4R-203ENST00000425986 DZIP1LQ8IYY4 767 aaKnown RBP23.24■■□□□ 1.31
RTN4R-203ENST00000425986 AXIN2Q9Y2T1 843 aa23.24■■□□□ 1.31
RTN4R-203ENST00000425986 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
RTN4R-203ENST00000425986 IPO8O15397 1037 aaKnown RBP23.23■■□□□ 1.31
RTN4R-203ENST00000425986 ATF7IPQ6VMQ6 1270 aa23.23■■□□□ 1.31
RTN4R-203ENST00000425986 ANKRD24Q8TF21 1146 aa23.23■■□□□ 1.31
RTN4R-203ENST00000425986 LRRC59Q96AG4 307 aaKnown RBP23.23■■□□□ 1.31
RTN4R-203ENST00000425986 KIF16BQ96L93 1317 aa23.23■■□□□ 1.31
RTN4R-203ENST00000425986 KDM2BQ8NHM5 1336 aa23.22■■□□□ 1.31
RTN4R-203ENST00000425986 RGPD2P0DJD1 1756 aa23.22■■□□□ 1.31
RTN4R-203ENST00000425986 TRIM27P14373 513 aa23.21■■□□□ 1.31
RTN4R-203ENST00000425986 CENPQQ7L2Z9 268 aaPredicted RBP23.21■■□□□ 1.31
RTN4R-203ENST00000425986 FTSJ3Q8IY81 847 aaKnown RBP23.21■■□□□ 1.31
RTN4R-203ENST00000425986 MVPQ14764 893 aaKnown RBP23.2■■□□□ 1.3
RTN4R-203ENST00000425986 MRPL50Q8N5N7 158 aaKnown RBP23.2■■□□□ 1.3
RTN4R-203ENST00000425986 MAP3K5Q99683 1374 aa23.19■■□□□ 1.3
RTN4R-203ENST00000425986 CABLES1Q8TDN4 633 aa23.19■■□□□ 1.3
RTN4R-203ENST00000425986 NCAPD2Q15021 1401 aa23.19■■□□□ 1.3
RTN4R-203ENST00000425986 KIAA0232Q92628 1395 aa23.18■■□□□ 1.3
RTN4R-203ENST00000425986 HAP1P54257 671 aaPredicted RBP23.18■■□□□ 1.3
RTN4R-203ENST00000425986 RGPD5Q99666 1765 aa23.17■■□□□ 1.3
RTN4R-203ENST00000425986 SOS2Q07890 1332 aaPredicted RBP23.17■■□□□ 1.3
RTN4R-203ENST00000425986 IL17REQ8NFR9 667 aa23.17■■□□□ 1.3
RTN4R-203ENST00000425986 ARHGAP45Q92619 1136 aa23.17■■□□□ 1.3
RTN4R-203ENST00000425986 MIS18AQ9NYP9 233 aa23.16■■□□□ 1.3
RTN4R-203ENST00000425986 TSPYL4Q9UJ04 414 aa23.16■■□□□ 1.3
RTN4R-203ENST00000425986 ERBB3P21860 1342 aa23.16■■□□□ 1.3
RTN4R-203ENST00000425986 PLEKHO1Q53GL0 409 aaPredicted RBP23.15■■□□□ 1.3
RTN4R-203ENST00000425986 AMOTQ4VCS5 1084 aa23.14■■□□□ 1.3
RTN4R-203ENST00000425986 KRT24Q2M2I5 525 aa23.14■■□□□ 1.29
RTN4R-203ENST00000425986 RBM19Q9Y4C8 960 aaKnown RBP23.14■■□□□ 1.29
RTN4R-203ENST00000425986 LRRC37A3O60309 1634 aa23.13■■□□□ 1.29
RTN4R-203ENST00000425986 CRYBG1Q9Y4K1 1723 aa23.13■■□□□ 1.29
RTN4R-203ENST00000425986 BABAM1Q9NWV8 329 aa23.13■■□□□ 1.29
RTN4R-203ENST00000425986 DDX19BQ9UMR2 479 aa23.13■■□□□ 1.29
RTN4R-203ENST00000425986 CAMTA1Q9Y6Y1 1673 aa23.13■■□□□ 1.29
RTN4R-203ENST00000425986 COL18A1P39060 1754 aa23.13■■□□□ 1.29
RTN4R-203ENST00000425986 TCERG1O14776 1098 aaKnown RBP23.12■■□□□ 1.29
RTN4R-203ENST00000425986 TAF7Q15545 349 aaPredicted RBP23.12■■□□□ 1.29
RTN4R-203ENST00000425986 CPDO75976 1380 aa23.11■■□□□ 1.29
RTN4R-203ENST00000425986 IGHDP01880 384 aa23.11■■□□□ 1.29
RTN4R-203ENST00000425986 TMEM57Q8N5G2 664 aa23.11■■□□□ 1.29
RTN4R-203ENST00000425986 AKAP4Q5JQC9 854 aa23.1■■□□□ 1.29
RTN4R-203ENST00000425986 ITPRIPQ8IWB1 547 aa23.1■■□□□ 1.29
RTN4R-203ENST00000425986 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
RTN4R-203ENST00000425986 PCDHB15Q9Y5E8 787 aa23.1■■□□□ 1.29
RTN4R-203ENST00000425986 ABCC6O95255 1503 aa23.1■■□□□ 1.29
RTN4R-203ENST00000425986 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
RTN4R-203ENST00000425986 CHRNA2Q15822 529 aa23.09■■□□□ 1.29
RTN4R-203ENST00000425986 NLRP2Q9NX02 1062 aa23.08■■□□□ 1.29
RTN4R-203ENST00000425986 LMO7Q8WWI1 1683 aa23.08■■□□□ 1.28
RTN4R-203ENST00000425986 API5Q9BZZ5 524 aaKnown RBP23.07■■□□□ 1.28
RTN4R-203ENST00000425986 LGR6Q9HBX8 967 aa23.07■■□□□ 1.28
RTN4R-203ENST00000425986 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
RTN4R-203ENST00000425986 CSB-PGBD3P0DP91 1061 aa23.05■■□□□ 1.28
RTN4R-203ENST00000425986 RAPGEF4Q8WZA2 1011 aa23.04■■□□□ 1.28
RTN4R-203ENST00000425986 RWDD1Q9H446 243 aaPredicted RBP23.04■■□□□ 1.28
RTN4R-203ENST00000425986 ZBTB40Q9NUA8 1239 aa23.04■■□□□ 1.28
RTN4R-203ENST00000425986 NHSL1Q5SYE7 1610 aa23.04■■□□□ 1.28
RTN4R-203ENST00000425986 ABCC4O15439 1325 aa23.03■■□□□ 1.28
RTN4R-203ENST00000425986 SOS1Q07889 1333 aaPredicted RBP23.03■■□□□ 1.28
RTN4R-203ENST00000425986 MPRIPQ6WCQ1 1025 aa23.03■■□□□ 1.28
RTN4R-203ENST00000425986 SKAP1Q86WV1 359 aa23.03■■□□□ 1.28
RTN4R-203ENST00000425986 CHMP4BQ9H444 224 aaKnown RBP23.02■■□□□ 1.28
RTN4R-203ENST00000425986 RNMTO43148 476 aaKnown RBP23.01■■□□□ 1.27
RTN4R-203ENST00000425986 PRDM11Q9NQV5 511 aa23.01■■□□□ 1.27
RTN4R-203ENST00000425986 FAM208AQ9UK61 1670 aaKnown RBP23.01■■□□□ 1.27
RTN4R-203ENST00000425986 SLC4A2P04920 1241 aa23.01■■□□□ 1.27
RTN4R-203ENST00000425986 TEFQ10587 303 aa23.01■■□□□ 1.27
RTN4R-203ENST00000425986 ZBTB7BO15156 539 aaPredicted RBP23■■□□□ 1.27
RTN4R-203ENST00000425986 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
RTN4R-203ENST00000425986 PTPRCP08575 1304 aa23■■□□□ 1.27
RTN4R-203ENST00000425986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23■■□□□ 1.27
RTN4R-203ENST00000425986 OVOS2A0A0G2JMS6 1433 aa22.98■■□□□ 1.27
RTN4R-203ENST00000425986 CCDC30Q5VVM6 783 aa22.98■■□□□ 1.27
RTN4R-203ENST00000425986 SPG7Q9UQ90 795 aa22.98■■□□□ 1.27
RTN4R-203ENST00000425986 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
RTN4R-203ENST00000425986 HDAC1Q13547 482 aaPredicted RBP22.96■■□□□ 1.27
RTN4R-203ENST00000425986 STK31Q9BXU1 1019 aa22.96■■□□□ 1.27
RTN4R-203ENST00000425986 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
RTN4R-203ENST00000425986 BTBD11A6QL63 1104 aa22.96■■□□□ 1.27
RTN4R-203ENST00000425986 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
RTN4R-203ENST00000425986 LTBP4Q8N2S1 1624 aa22.95■■□□□ 1.26
RTN4R-203ENST00000425986 EIF4A1P60842 406 aaKnown RBP22.95■■□□□ 1.26
RTN4R-203ENST00000425986 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.26
RTN4R-203ENST00000425986 ABCA3Q99758 1704 aa22.95■■□□□ 1.26
RTN4R-203ENST00000425986 KDM3BQ7LBC6 1761 aa22.94■■□□□ 1.26
RTN4R-203ENST00000425986 MEGF6O75095 1541 aa22.94■■□□□ 1.26
RTN4R-203ENST00000425986 RGS12O14924 1447 aa22.94■■□□□ 1.26
RTN4R-203ENST00000425986 PDE4AP27815 886 aa22.92■■□□□ 1.26
RTN4R-203ENST00000425986 G2E3Q7L622 706 aa22.92■■□□□ 1.26
RTN4R-203ENST00000425986 ADAMTS7Q9UKP4 1686 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms