RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 SLIT3O75094 1523 aa9.69□□□□□ -0.86
CHCHD3P1-201ENST00000425516 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
CHCHD3P1-201ENST00000425516 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
CHCHD3P1-201ENST00000425516 KNSTRNQ9Y448 316 aa9.69□□□□□ -0.86
CHCHD3P1-201ENST00000425516 MARF1Q9Y4F3 1742 aaKnown RBP9.69□□□□□ -0.86
CHCHD3P1-201ENST00000425516 CRYBG1Q9Y4K1 1723 aa9.69□□□□□ -0.86
CHCHD3P1-201ENST00000425516 NPC1L1Q9UHC9 1359 aa9.68□□□□□ -0.86
CHCHD3P1-201ENST00000425516 GCP02774 474 aa9.68□□□□□ -0.86
CHCHD3P1-201ENST00000425516 LRP6O75581 1613 aa9.67□□□□□ -0.86
CHCHD3P1-201ENST00000425516 GTPBP6O43824 516 aaPredicted RBP9.67□□□□□ -0.86
CHCHD3P1-201ENST00000425516 COG3Q96JB2 828 aa9.67□□□□□ -0.86
CHCHD3P1-201ENST00000425516 NSD2O96028 1365 aa9.66□□□□□ -0.86
CHCHD3P1-201ENST00000425516 ABCA3Q99758 1704 aa9.66□□□□□ -0.86
CHCHD3P1-201ENST00000425516 FBLN1P23142 703 aa9.66□□□□□ -0.86
CHCHD3P1-201ENST00000425516 ARHGEF25Q86VW2 580 aa9.66□□□□□ -0.86
CHCHD3P1-201ENST00000425516 KCNH5Q8NCM2 988 aa9.66□□□□□ -0.86
CHCHD3P1-201ENST00000425516 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
CHCHD3P1-201ENST00000425516 PHRF1Q9P1Y6 1649 aaKnown RBP9.66□□□□□ -0.86
CHCHD3P1-201ENST00000425516 NFAT5O94916 1531 aa9.66□□□□□ -0.86
CHCHD3P1-201ENST00000425516 CPDO75976 1380 aa9.65□□□□□ -0.86
CHCHD3P1-201ENST00000425516 C2orf72A6NCS6 295 aa9.65□□□□□ -0.86
CHCHD3P1-201ENST00000425516 FAM83GA6ND36 823 aa9.65□□□□□ -0.86
CHCHD3P1-201ENST00000425516 NUTM2BA6NNL0 878 aaPredicted RBP9.65□□□□□ -0.86
CHCHD3P1-201ENST00000425516 NUTM2EB1AL46 878 aaPredicted RBP9.65□□□□□ -0.86
CHCHD3P1-201ENST00000425516 KIF3CO14782 793 aa9.65□□□□□ -0.86
CHCHD3P1-201ENST00000425516 NUTM2AQ8IVF1 878 aaPredicted RBP9.65□□□□□ -0.86
CHCHD3P1-201ENST00000425516 KIF20BQ96Q89 1820 aa9.65□□□□□ -0.86
CHCHD3P1-201ENST00000425516 ZC3H6P61129 1189 aaKnown RBP9.64□□□□□ -0.87
CHCHD3P1-201ENST00000425516 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
CHCHD3P1-201ENST00000425516 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
CHCHD3P1-201ENST00000425516 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
CHCHD3P1-201ENST00000425516 CC2D1BQ5T0F9 858 aaKnown RBP9.63□□□□□ -0.87
CHCHD3P1-201ENST00000425516 MORC1Q86VD1 984 aa9.63□□□□□ -0.87
CHCHD3P1-201ENST00000425516 FNBP4Q8N3X1 1017 aaPredicted RBP9.63□□□□□ -0.87
CHCHD3P1-201ENST00000425516 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
CHCHD3P1-201ENST00000425516 POLKQ9UBT6 870 aa9.62□□□□□ -0.87
CHCHD3P1-201ENST00000425516 MAP3K19Q56UN5 1328 aa9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 COL18A1P39060 1754 aa9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 HAP1P54257 671 aaPredicted RBP9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 RRS1Q15050 365 aaKnown RBP9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 PRDM11Q9NQV5 511 aa9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 AXIN2Q9Y2T1 843 aa9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 PARD3Q8TEW0 1356 aa9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 SLIT2O94813 1529 aa9.61□□□□□ -0.87
CHCHD3P1-201ENST00000425516 POTEB3A0JP26 581 aa9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 POTEBQ6S5H4 581 aa9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 IP6K1Q92551 441 aa9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 NGLY1Q96IV0 654 aa9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 C8orf37Q96NL8 207 aa9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 RGS17Q9UGC6 210 aaPredicted RBP9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 EMILIN1Q9Y6C2 1016 aa9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 LMO7Q8WWI1 1683 aa9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 CAMTA1Q9Y6Y1 1673 aa9.6□□□□□ -0.87
CHCHD3P1-201ENST00000425516 BCL9LQ86UU0 1499 aa9.59□□□□□ -0.87
CHCHD3P1-201ENST00000425516 SMG6Q86US8 1419 aaKnown RBP9.59□□□□□ -0.87
CHCHD3P1-201ENST00000425516 HOXC9P31274 260 aa9.59□□□□□ -0.87
CHCHD3P1-201ENST00000425516 ABCC6O95255 1503 aa9.59□□□□□ -0.87
CHCHD3P1-201ENST00000425516 COL14A1Q05707 1796 aaKnown RBP9.59□□□□□ -0.87
CHCHD3P1-201ENST00000425516 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
CHCHD3P1-201ENST00000425516 AFF2P51816 1311 aa9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 SNPHO15079 494 aa9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 PPP2R1AP30153 589 aa9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 CNGB1Q14028 1251 aaPredicted RBP9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 RALBP1Q15311 655 aa9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 BTG4Q9NY30 223 aa9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 PEAK1Q9H792 1746 aa9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 INSRP06213 1382 aa9.58□□□□□ -0.88
CHCHD3P1-201ENST00000425516 MTHFSP49914 203 aa9.57□□□□□ -0.88
CHCHD3P1-201ENST00000425516 HSP90AB2PQ58FF8 381 aa9.57□□□□□ -0.88
CHCHD3P1-201ENST00000425516 UNC5CLQ8IV45 518 aa9.57□□□□□ -0.88
CHCHD3P1-201ENST00000425516 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHCHD3P1-201ENST00000425516 RTL1A6NKG5 1358 aa9.57□□□□□ -0.88
CHCHD3P1-201ENST00000425516 LTN1O94822 1766 aa9.57□□□□□ -0.88
CHCHD3P1-201ENST00000425516 BLMP54132 1417 aaPredicted RBP9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 MAP2P11137 1827 aaKnown RBP9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 PLCH1Q4KWH8 1693 aa9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 COL5A2P05997 1499 aaPredicted RBP9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 FLT4P35916 1363 aa9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 AMPHP49418 695 aa9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 USP21Q9UK80 565 aa9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 NRAPQ86VF7 1730 aa9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 NWD2Q9ULI1 1742 aa9.56□□□□□ -0.88
CHCHD3P1-201ENST00000425516 VPS72Q15906 364 aa9.55□□□□□ -0.88
CHCHD3P1-201ENST00000425516 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
CHCHD3P1-201ENST00000425516 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
CHCHD3P1-201ENST00000425516 ATRNO75882 1429 aa9.55□□□□□ -0.88
CHCHD3P1-201ENST00000425516 RGPD5Q99666 1765 aa9.55□□□□□ -0.88
CHCHD3P1-201ENST00000425516 ERBB3P21860 1342 aa9.55□□□□□ -0.88
CHCHD3P1-201ENST00000425516 CDK12Q9NYV4 1490 aaPredicted RBP9.54□□□□□ -0.88
CHCHD3P1-201ENST00000425516 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.54□□□□□ -0.88
CHCHD3P1-201ENST00000425516 PPM1GO15355 546 aaPredicted RBP9.54□□□□□ -0.88
CHCHD3P1-201ENST00000425516 ZNF772Q68DY9 489 aaPredicted RBP9.54□□□□□ -0.88
CHCHD3P1-201ENST00000425516 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
CHCHD3P1-201ENST00000425516 QTRT2Q9H974 415 aaKnown RBP9.54□□□□□ -0.88
CHCHD3P1-201ENST00000425516 WDR17Q8IZU2 1322 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms