RNA–Protein interactions for RNA: ENST00000424439.2

NHLRC4-201, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NHLRC4, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-201ENST00000424439 RIMS2Q9UQ26 1411 aa28.66■■■□□ 2.18
NHLRC4-201ENST00000424439 RPAP2Q8IXW5 612 aaPredicted RBP28.66■■■□□ 2.18
NHLRC4-201ENST00000424439 OFD1O75665 1012 aa28.65■■■□□ 2.18
NHLRC4-201ENST00000424439 HMOX1P09601 288 aa28.65■■■□□ 2.18
NHLRC4-201ENST00000424439 HAP1P54257 671 aaPredicted RBP28.65■■■□□ 2.18
NHLRC4-201ENST00000424439 C8orf58Q8NAV2 365 aa28.65■■■□□ 2.18
NHLRC4-201ENST00000424439 ESF1Q9H501 851 aaKnown RBP28.65■■■□□ 2.18
NHLRC4-201ENST00000424439 ATP10DQ9P241 1426 aa28.64■■■□□ 2.18
NHLRC4-201ENST00000424439 CASC1Q6TDU7 716 aa28.63■■■□□ 2.17
NHLRC4-201ENST00000424439 AK9Q5TCS8 1911 aa28.62■■■□□ 2.17
NHLRC4-201ENST00000424439 ZSCAN23Q3MJ62 389 aa28.62■■■□□ 2.17
NHLRC4-201ENST00000424439 MCTP1Q6DN14 999 aa28.62■■■□□ 2.17
NHLRC4-201ENST00000424439 ST18O60284 1047 aa28.61■■■□□ 2.17
NHLRC4-201ENST00000424439 PLPPR3Q6T4P5 718 aa28.61■■■□□ 2.17
NHLRC4-201ENST00000424439 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.61■■■□□ 2.17
NHLRC4-201ENST00000424439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.61■■■□□ 2.17
NHLRC4-201ENST00000424439 PDLIM2Q96JY6 352 aa28.61■■■□□ 2.17
NHLRC4-201ENST00000424439 ELL2O00472 640 aaPredicted RBP28.6■■■□□ 2.17
NHLRC4-201ENST00000424439 SETD1AO15047 1707 aaKnown RBP28.59■■■□□ 2.17
NHLRC4-201ENST00000424439 MSNP26038 577 aaKnown RBP28.58■■■□□ 2.17
NHLRC4-201ENST00000424439 RGS12O14924 1447 aa28.58■■■□□ 2.17
NHLRC4-201ENST00000424439 REC8O95072 547 aa28.57■■■□□ 2.16
NHLRC4-201ENST00000424439 EMILIN1Q9Y6C2 1016 aa28.57■■■□□ 2.16
NHLRC4-201ENST00000424439 KIAA1211Q6ZU35 1233 aa28.57■■■□□ 2.16
NHLRC4-201ENST00000424439 SDSP20132 328 aa28.56■■■□□ 2.16
NHLRC4-201ENST00000424439 CAVIN1Q6NZI2 390 aaKnown RBP28.56■■■□□ 2.16
NHLRC4-201ENST00000424439 CEP85Q6P2H3 762 aa28.55■■■□□ 2.16
NHLRC4-201ENST00000424439 PDCL3Q9H2J4 239 aa28.55■■■□□ 2.16
NHLRC4-201ENST00000424439 KIAA0232Q92628 1395 aa28.55■■■□□ 2.16
NHLRC4-201ENST00000424439 ZNF500O60304 480 aaPredicted RBP28.55■■■□□ 2.16
NHLRC4-201ENST00000424439 FBLN1P23142 703 aa28.55■■■□□ 2.16
NHLRC4-201ENST00000424439 NOL7Q9UMY1 257 aaKnown RBP28.55■■■□□ 2.16
NHLRC4-201ENST00000424439 SENP3Q9H4L4 574 aaPredicted RBP28.54■■■□□ 2.16
NHLRC4-201ENST00000424439 PTPRCP08575 1304 aa28.54■■■□□ 2.16
NHLRC4-201ENST00000424439 NRKQ7Z2Y5 1582 aa28.54■■■□□ 2.16
NHLRC4-201ENST00000424439 C16orf71Q8IYS4 520 aaPredicted RBP28.54■■■□□ 2.16
NHLRC4-201ENST00000424439 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.54■■■□□ 2.16
NHLRC4-201ENST00000424439 MON2Q7Z3U7 1717 aa28.54■■■□□ 2.16
NHLRC4-201ENST00000424439 TNRQ92752 1358 aa28.53■■■□□ 2.16
NHLRC4-201ENST00000424439 RTL1A6NKG5 1358 aa28.53■■■□□ 2.16
NHLRC4-201ENST00000424439 RBSNQ9H1K0 784 aa28.52■■■□□ 2.16
NHLRC4-201ENST00000424439 MCM5P33992 734 aa28.52■■■□□ 2.16
NHLRC4-201ENST00000424439 CEBPAP49715 358 aaPredicted RBP28.52■■■□□ 2.16
NHLRC4-201ENST00000424439 OSBPL3Q9H4L5 887 aa28.52■■■□□ 2.16
NHLRC4-201ENST00000424439 NRXN3Q9Y4C0 1643 aa28.52■■■□□ 2.16
NHLRC4-201ENST00000424439 LMTK3Q96Q04 1460 aa28.51■■■□□ 2.15
NHLRC4-201ENST00000424439 ZDHHC9Q9Y397 364 aa28.5■■■□□ 2.15
NHLRC4-201ENST00000424439 C3P01024 1663 aa28.5■■■□□ 2.15
NHLRC4-201ENST00000424439 ERC2O15083 957 aa28.5■■■□□ 2.15
NHLRC4-201ENST00000424439 NCLP19338 710 aaKnown RBP28.49■■■□□ 2.15
NHLRC4-201ENST00000424439 PKP1Q13835 747 aa28.49■■■□□ 2.15
NHLRC4-201ENST00000424439 GPT2Q8TD30 523 aa28.49■■■□□ 2.15
NHLRC4-201ENST00000424439 CHL1O00533 1208 aa28.48■■■□□ 2.15
NHLRC4-201ENST00000424439 MCM2P49736 904 aa28.48■■■□□ 2.15
NHLRC4-201ENST00000424439 LRSAM1Q6UWE0 723 aa28.48■■■□□ 2.15
NHLRC4-201ENST00000424439 PRIM1P49642 420 aaKnown RBP28.47■■■□□ 2.15
NHLRC4-201ENST00000424439 OTUD7AQ8TE49 926 aaPredicted RBP28.47■■■□□ 2.15
NHLRC4-201ENST00000424439 PRPF40AO75400 957 aaKnown RBP28.47■■■□□ 2.15
NHLRC4-201ENST00000424439 NME9Q86XW9 330 aa28.47■■■□□ 2.15
NHLRC4-201ENST00000424439 UBR1Q8IWV7 1749 aa28.47■■■□□ 2.15
NHLRC4-201ENST00000424439 AKAP12Q02952 1782 aa28.46■■■□□ 2.15
NHLRC4-201ENST00000424439 MBD3O95983 291 aa28.46■■■□□ 2.15
NHLRC4-201ENST00000424439 COG3Q96JB2 828 aa28.46■■■□□ 2.15
NHLRC4-201ENST00000424439 FAM83GA6ND36 823 aa28.46■■■□□ 2.15
NHLRC4-201ENST00000424439 HDGFP51858 240 aaKnown RBP28.46■■■□□ 2.15
NHLRC4-201ENST00000424439 ZGPATQ8N5A5 531 aaKnown RBP28.46■■■□□ 2.15
NHLRC4-201ENST00000424439 WASLO00401 505 aaPredicted RBP28.45■■■□□ 2.14
NHLRC4-201ENST00000424439 HMMRO75330 724 aa28.45■■■□□ 2.14
NHLRC4-201ENST00000424439 MSH6P52701 1360 aa28.45■■■□□ 2.14
NHLRC4-201ENST00000424439 VSIG10Q8N0Z9 540 aa28.44■■■□□ 2.14
NHLRC4-201ENST00000424439 WAPLQ7Z5K2 1190 aa28.44■■■□□ 2.14
NHLRC4-201ENST00000424439 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.43■■■□□ 2.14
NHLRC4-201ENST00000424439 CSPP1Q1MSJ5 1256 aa28.42■■■□□ 2.14
NHLRC4-201ENST00000424439 ZKSCAN5Q9Y2L8 839 aa28.42■■■□□ 2.14
NHLRC4-201ENST00000424439 CPS1P31327 1500 aa28.42■■■□□ 2.14
NHLRC4-201ENST00000424439 MAP7D2Q96T17 732 aa28.42■■■□□ 2.14
NHLRC4-201ENST00000424439 IL17RAQ96F46 866 aa28.41■■■□□ 2.14
NHLRC4-201ENST00000424439 SETD1BQ9UPS6 1966 aaKnown RBP28.41■■■□□ 2.14
NHLRC4-201ENST00000424439 TUBGCP6Q96RT7 1819 aa28.41■■■□□ 2.14
NHLRC4-201ENST00000424439 CUL4AQ13619 759 aa28.41■■■□□ 2.14
NHLRC4-201ENST00000424439 DCTN1Q14203 1278 aa28.41■■■□□ 2.14
NHLRC4-201ENST00000424439 TMEM2Q9UHN6 1383 aa28.4■■■□□ 2.14
NHLRC4-201ENST00000424439 SMARCA5O60264 1052 aaPredicted RBP28.4■■■□□ 2.14
NHLRC4-201ENST00000424439 ITSN1Q15811 1721 aa28.39■■■□□ 2.14
NHLRC4-201ENST00000424439 TMEM63CQ9P1W3 806 aa28.39■■■□□ 2.14
NHLRC4-201ENST00000424439 CCDC39Q9UFE4 941 aa28.39■■■□□ 2.14
NHLRC4-201ENST00000424439 SIRT1Q96EB6 747 aa28.39■■■□□ 2.13
NHLRC4-201ENST00000424439 MEIS3Q99687 375 aa28.39■■■□□ 2.13
NHLRC4-201ENST00000424439 PDE1AP54750 535 aa28.38■■■□□ 2.13
NHLRC4-201ENST00000424439 ANAPC15P60006 121 aa28.38■■■□□ 2.13
NHLRC4-201ENST00000424439 INTS4Q96HW7 963 aaKnown RBP28.38■■■□□ 2.13
NHLRC4-201ENST00000424439 ZMYND15Q9H091 742 aa28.38■■■□□ 2.13
NHLRC4-201ENST00000424439 BRD1O95696 1058 aa28.38■■■□□ 2.13
NHLRC4-201ENST00000424439 RBM27Q9P2N5 1060 aaKnown RBP28.38■■■□□ 2.13
NHLRC4-201ENST00000424439 ZRANB1Q9UGI0 708 aa28.38■■■□□ 2.13
NHLRC4-201ENST00000424439 METP08581 1390 aa28.37■■■□□ 2.13
NHLRC4-201ENST00000424439 TMX3Q96JJ7 454 aa28.36■■■□□ 2.13
NHLRC4-201ENST00000424439 PKNOX2Q96KN3 472 aa28.36■■■□□ 2.13
NHLRC4-201ENST00000424439 TECPR2O15040 1411 aa28.35■■■□□ 2.13
NHLRC4-201ENST00000424439 SSH2Q76I76 1423 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms