RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
SDCBP-203ENST00000424270 KDM2AQ9Y2K7 1162 aa9.32□□□□□ -0.92
SDCBP-203ENST00000424270 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
SDCBP-203ENST00000424270 QSER1Q2KHR3 1735 aa9.31□□□□□ -0.92
SDCBP-203ENST00000424270 PLEKHG3A1L390 1219 aa9.31□□□□□ -0.92
SDCBP-203ENST00000424270 KCNH5Q8NCM2 988 aa9.31□□□□□ -0.92
SDCBP-203ENST00000424270 FLAD1Q8NFF5 587 aa9.31□□□□□ -0.92
SDCBP-203ENST00000424270 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
SDCBP-203ENST00000424270 TRPM1Q7Z4N2 1603 aa9.31□□□□□ -0.92
SDCBP-203ENST00000424270 ABCC6O95255 1503 aa9.31□□□□□ -0.92
SDCBP-203ENST00000424270 MLLT1Q03111 559 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-203ENST00000424270 RRAGCQ9HB90 399 aa9.3□□□□□ -0.92
SDCBP-203ENST00000424270 COL24A1Q17RW2 1714 aa9.3□□□□□ -0.92
SDCBP-203ENST00000424270 PHF14O94880 888 aa9.29□□□□□ -0.92
SDCBP-203ENST00000424270 PRIM1P49642 420 aaKnown RBP9.29□□□□□ -0.92
SDCBP-203ENST00000424270 CFAP44Q96MT7 982 aa9.29□□□□□ -0.92
SDCBP-203ENST00000424270 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
SDCBP-203ENST00000424270 KAT6BQ8WYB5 2073 aa9.28□□□□□ -0.92
SDCBP-203ENST00000424270 USP47Q96K76 1375 aa9.28□□□□□ -0.92
SDCBP-203ENST00000424270 C9orf131Q5VYM1 1079 aa9.28□□□□□ -0.92
SDCBP-203ENST00000424270 ARHGEF25Q86VW2 580 aa9.28□□□□□ -0.92
SDCBP-203ENST00000424270 AK7Q96M32 723 aa9.28□□□□□ -0.92
SDCBP-203ENST00000424270 TUBGCP6Q96RT7 1819 aa9.28□□□□□ -0.92
SDCBP-203ENST00000424270 PLEKHG2Q9H7P9 1386 aa9.27□□□□□ -0.93
SDCBP-203ENST00000424270 CCDC85CA6NKD9 419 aa9.27□□□□□ -0.93
SDCBP-203ENST00000424270 FCHSD2O94868 740 aa9.27□□□□□ -0.93
SDCBP-203ENST00000424270 SLC4A2P04920 1241 aa9.27□□□□□ -0.93
SDCBP-203ENST00000424270 HMGB2P26583 209 aaKnown RBP9.27□□□□□ -0.93
SDCBP-203ENST00000424270 MPHOSPH9Q99550 1183 aa9.27□□□□□ -0.93
SDCBP-203ENST00000424270 ADGRB1O14514 1584 aa9.27□□□□□ -0.93
SDCBP-203ENST00000424270 SLIT3O75094 1523 aa9.26□□□□□ -0.93
SDCBP-203ENST00000424270 KCPQ6ZWJ8 1503 aa9.26□□□□□ -0.93
SDCBP-203ENST00000424270 CABP2Q9NPB3 220 aa9.26□□□□□ -0.93
SDCBP-203ENST00000424270 RNF181Q9P0P0 153 aa9.26□□□□□ -0.93
SDCBP-203ENST00000424270 MKRN1Q9UHC7 482 aaKnown RBP9.26□□□□□ -0.93
SDCBP-203ENST00000424270 CTCFP49711 727 aaPredicted RBP9.25□□□□□ -0.93
SDCBP-203ENST00000424270 DCAF11Q8TEB1 546 aa9.25□□□□□ -0.93
SDCBP-203ENST00000424270 ABHD8Q96I13 439 aa9.25□□□□□ -0.93
SDCBP-203ENST00000424270 CABP1Q9NZU7 370 aa9.25□□□□□ -0.93
SDCBP-203ENST00000424270 ANKRD36BQ8N2N9 1353 aa9.24□□□□□ -0.93
SDCBP-203ENST00000424270 A0A0G2JLW4 131 aa9.24□□□□□ -0.93
SDCBP-203ENST00000424270 FOXN1O15353 648 aa9.24□□□□□ -0.93
SDCBP-203ENST00000424270 PRDM10Q9NQV6 1147 aa9.24□□□□□ -0.93
SDCBP-203ENST00000424270 COL18A1P39060 1754 aa9.23□□□□□ -0.93
SDCBP-203ENST00000424270 RGPD5Q99666 1765 aa9.23□□□□□ -0.93
SDCBP-203ENST00000424270 ANKRD24Q8TF21 1146 aa9.23□□□□□ -0.93
SDCBP-203ENST00000424270 CICQ96RK0 1608 aaPredicted RBP9.23□□□□□ -0.93
SDCBP-203ENST00000424270 SMIM5Q71RC9 77 aa9.22□□□□□ -0.93
SDCBP-203ENST00000424270 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
SDCBP-203ENST00000424270 ERBB3P21860 1342 aa9.22□□□□□ -0.93
SDCBP-203ENST00000424270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.21□□□□□ -0.94
SDCBP-203ENST00000424270 LBX1P52954 281 aa9.21□□□□□ -0.94
SDCBP-203ENST00000424270 TGFB2P61812 414 aa9.21□□□□□ -0.94
SDCBP-203ENST00000424270 NSD3Q9BZ95 1437 aa9.21□□□□□ -0.94
SDCBP-203ENST00000424270 MMP10P09238 476 aa9.2□□□□□ -0.94
SDCBP-203ENST00000424270 VEGFAP15692 232 aaPredicted RBP9.2□□□□□ -0.94
SDCBP-203ENST00000424270 PXDNLA1KZ92 1463 aa9.2□□□□□ -0.94
SDCBP-203ENST00000424270 DPEP1P16444 411 aa9.19□□□□□ -0.94
SDCBP-203ENST00000424270 CCDC87Q9NVE4 849 aa9.19□□□□□ -0.94
SDCBP-203ENST00000424270 TTC21BQ7Z4L5 1316 aa9.19□□□□□ -0.94
SDCBP-203ENST00000424270 C10orf71Q711Q0 1435 aa9.19□□□□□ -0.94
SDCBP-203ENST00000424270 QRICH2Q9H0J4 1663 aa9.19□□□□□ -0.94
SDCBP-203ENST00000424270 DOT1LQ8TEK3 1739 aa9.19□□□□□ -0.94
SDCBP-203ENST00000424270 LY75O60449 1722 aa9.18□□□□□ -0.94
SDCBP-203ENST00000424270 C5P01031 1676 aa9.18□□□□□ -0.94
SDCBP-203ENST00000424270 DALRD3Q5D0E6 543 aaKnown RBP9.18□□□□□ -0.94
SDCBP-203ENST00000424270 MPRIPQ6WCQ1 1025 aa9.18□□□□□ -0.94
SDCBP-203ENST00000424270 ZCRB1Q8TBF4 217 aaKnown RBP9.18□□□□□ -0.94
SDCBP-203ENST00000424270 PALLDQ8WX93 1383 aa9.18□□□□□ -0.94
SDCBP-203ENST00000424270 TNRC6CQ9HCJ0 1690 aaKnown RBP9.18□□□□□ -0.94
SDCBP-203ENST00000424270 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
SDCBP-203ENST00000424270 NSD2O96028 1365 aa9.17□□□□□ -0.94
SDCBP-203ENST00000424270 TTC21AQ8NDW8 1320 aa9.17□□□□□ -0.94
SDCBP-203ENST00000424270 SSFA2P28290 1259 aa9.17□□□□□ -0.94
SDCBP-203ENST00000424270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.17□□□□□ -0.94
SDCBP-203ENST00000424270 ZNF692Q9BU19 519 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-203ENST00000424270 PIM2Q9P1W9 311 aa9.17□□□□□ -0.94
SDCBP-203ENST00000424270 PCNTO95613 3336 aa9.16□□□□□ -0.94
SDCBP-203ENST00000424270 CENPJQ9HC77 1338 aaPredicted RBP9.16□□□□□ -0.94
SDCBP-203ENST00000424270 GNPATO15228 680 aa9.16□□□□□ -0.94
SDCBP-203ENST00000424270 SAMD1Q6SPF0 538 aaPredicted RBP9.16□□□□□ -0.94
SDCBP-203ENST00000424270 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
SDCBP-203ENST00000424270 KIAA1210Q9ULL0 1709 aa9.16□□□□□ -0.94
SDCBP-203ENST00000424270 N4BP2Q86UW6 1770 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-203ENST00000424270 PKD1L3Q7Z443 1732 aa9.15□□□□□ -0.94
SDCBP-203ENST00000424270 SMARCC1Q92922 1105 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-203ENST00000424270 BEGAINQ9BUH8 593 aa9.15□□□□□ -0.94
SDCBP-203ENST00000424270 NFAT5O94916 1531 aa9.15□□□□□ -0.95
SDCBP-203ENST00000424270 KTN1Q86UP2 1357 aaKnown RBP9.14□□□□□ -0.95
SDCBP-203ENST00000424270 AMIGO3Q86WK7 504 aa9.14□□□□□ -0.95
SDCBP-203ENST00000424270 STAC3Q96MF2 364 aa9.14□□□□□ -0.95
SDCBP-203ENST00000424270 SPINK5Q9NQ38 1064 aaPredicted RBP9.14□□□□□ -0.95
SDCBP-203ENST00000424270 C4BP0C0L5 1744 aa9.14□□□□□ -0.95
SDCBP-203ENST00000424270 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
SDCBP-203ENST00000424270 GLTPD2A6NH11 291 aa9.13□□□□□ -0.95
SDCBP-203ENST00000424270 TMF1P82094 1093 aa9.13□□□□□ -0.95
SDCBP-203ENST00000424270 DPY19L2Q6NUT2 758 aa9.13□□□□□ -0.95
SDCBP-203ENST00000424270 NLGN1Q8N2Q7 840 aa9.13□□□□□ -0.95
SDCBP-203ENST00000424270 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
SDCBP-203ENST00000424270 EVC2Q86UK5 1308 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms