RNA–Protein interactions for RNA: ENST00000424207.5

EFEMP1-204, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 5

Gene EFEMP1, Length 339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-204ENST00000424207 PARP4Q9UKK3 1724 aaKnown RBP23.16■■□□□ 1.3
EFEMP1-204ENST00000424207 HTATSF1O43719 755 aaKnown RBP23.16■■□□□ 1.3
EFEMP1-204ENST00000424207 TATP17735 454 aaPredicted RBP23.16■■□□□ 1.3
EFEMP1-204ENST00000424207 RRP7AQ9Y3A4 280 aaKnown RBP23.16■■□□□ 1.3
EFEMP1-204ENST00000424207 MEGF6O75095 1541 aa23.16■■□□□ 1.3
EFEMP1-204ENST00000424207 PKD1L3Q7Z443 1732 aa23.16■■□□□ 1.3
EFEMP1-204ENST00000424207 OVOS2A0A0G2JMS6 1433 aa23.16■■□□□ 1.3
EFEMP1-204ENST00000424207 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
EFEMP1-204ENST00000424207 SPATA31A1Q5TZJ5 1347 aa23.15■■□□□ 1.3
EFEMP1-204ENST00000424207 SPATA31A5Q5VU36 1347 aa23.15■■□□□ 1.3
EFEMP1-204ENST00000424207 SPATA31A7Q8IWB4 1347 aa23.15■■□□□ 1.3
EFEMP1-204ENST00000424207 VPS72Q15906 364 aa23.15■■□□□ 1.3
EFEMP1-204ENST00000424207 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
EFEMP1-204ENST00000424207 IL2RBP14784 551 aa23.14■■□□□ 1.29
EFEMP1-204ENST00000424207 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
EFEMP1-204ENST00000424207 CDCA7Q9BWT1 371 aaPredicted RBP23.14■■□□□ 1.29
EFEMP1-204ENST00000424207 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
EFEMP1-204ENST00000424207 USP21Q9UK80 565 aa23.12■■□□□ 1.29
EFEMP1-204ENST00000424207 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
EFEMP1-204ENST00000424207 SALL2Q9Y467 1007 aaPredicted RBP23.12■■□□□ 1.29
EFEMP1-204ENST00000424207 IL16Q14005 1332 aa23.11■■□□□ 1.29
EFEMP1-204ENST00000424207 WNK3Q9BYP7 1800 aa23.11■■□□□ 1.29
EFEMP1-204ENST00000424207 BARGINQ6ZT62 677 aa23.11■■□□□ 1.29
EFEMP1-204ENST00000424207 GOLGA2Q08379 1002 aa23.1■■□□□ 1.29
EFEMP1-204ENST00000424207 MAP3K5Q99683 1374 aa23.1■■□□□ 1.29
EFEMP1-204ENST00000424207 SENP3-EIF4A1A0A087X0R7 540 aa23.09■■□□□ 1.29
EFEMP1-204ENST00000424207 GNAT3A8MTJ3 354 aa23.09■■□□□ 1.29
EFEMP1-204ENST00000424207 CALD1Q05682 793 aaKnown RBP23.09■■□□□ 1.29
EFEMP1-204ENST00000424207 AKAP4Q5JQC9 854 aa23.09■■□□□ 1.29
EFEMP1-204ENST00000424207 AFF2P51816 1311 aa23.08■■□□□ 1.29
EFEMP1-204ENST00000424207 CENPBP07199 599 aaPredicted RBP23.08■■□□□ 1.29
EFEMP1-204ENST00000424207 TRMT2AQ8IZ69 625 aaKnown RBP23.08■■□□□ 1.29
EFEMP1-204ENST00000424207 ADAMTS7Q9UKP4 1686 aa23.07■■□□□ 1.28
EFEMP1-204ENST00000424207 ZNF530Q6P9A1 599 aaPredicted RBP23.07■■□□□ 1.28
EFEMP1-204ENST00000424207 ZCRB1Q8TBF4 217 aaKnown RBP23.07■■□□□ 1.28
EFEMP1-204ENST00000424207 ATRNO75882 1429 aa23.07■■□□□ 1.28
EFEMP1-204ENST00000424207 E9PSI1 815 aa23.06■■□□□ 1.28
EFEMP1-204ENST00000424207 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
EFEMP1-204ENST00000424207 SLFN5Q08AF3 891 aa23.05■■□□□ 1.28
EFEMP1-204ENST00000424207 RTF1Q92541 710 aaKnown RBP23.05■■□□□ 1.28
EFEMP1-204ENST00000424207 LRRC37A3O60309 1634 aa23.04■■□□□ 1.28
EFEMP1-204ENST00000424207 C1orf141Q5JVX7 400 aa23.04■■□□□ 1.28
EFEMP1-204ENST00000424207 IFNL2Q8IZJ0 200 aa23.04■■□□□ 1.28
EFEMP1-204ENST00000424207 USP35Q9P2H5 1018 aa23.04■■□□□ 1.28
EFEMP1-204ENST00000424207 TRPC5Q9UL62 973 aaPredicted RBP23.04■■□□□ 1.28
EFEMP1-204ENST00000424207 SHANK3Q9BYB0 1731 aa23.04■■□□□ 1.28
EFEMP1-204ENST00000424207 PCDH11XQ9BZA7 1347 aa23.04■■□□□ 1.28
EFEMP1-204ENST00000424207 PCDH11YQ9BZA8 1340 aa23.04■■□□□ 1.28
EFEMP1-204ENST00000424207 PHKG2P15735 406 aa23.03■■□□□ 1.28
EFEMP1-204ENST00000424207 CYP27B1O15528 508 aa23.02■■□□□ 1.28
EFEMP1-204ENST00000424207 HSP90AB1P08238 724 aaKnown RBP23.02■■□□□ 1.28
EFEMP1-204ENST00000424207 NKX1-1Q15270 411 aaPredicted RBP23.02■■□□□ 1.28
EFEMP1-204ENST00000424207 CDCA7LQ96GN5 454 aa23.02■■□□□ 1.28
EFEMP1-204ENST00000424207 TNS2Q63HR2 1409 aa23.01■■□□□ 1.27
EFEMP1-204ENST00000424207 ZNF853P0CG23 659 aa23.01■■□□□ 1.27
EFEMP1-204ENST00000424207 IL17REQ8NFR9 667 aa23.01■■□□□ 1.27
EFEMP1-204ENST00000424207 GJD4Q96KN9 370 aaPredicted RBP23.01■■□□□ 1.27
EFEMP1-204ENST00000424207 IFT57Q9NWB7 429 aa23.01■■□□□ 1.27
EFEMP1-204ENST00000424207 ONECUT3O60422 494 aaPredicted RBP23■■□□□ 1.27
EFEMP1-204ENST00000424207 DUSP27Q5VZP5 1158 aa23■■□□□ 1.27
EFEMP1-204ENST00000424207 MYH16Q9H6N6 1097 aa23■■□□□ 1.27
EFEMP1-204ENST00000424207 SPINK5Q9NQ38 1064 aaPredicted RBP23■■□□□ 1.27
EFEMP1-204ENST00000424207 BABAM1Q9NWV8 329 aa23■■□□□ 1.27
EFEMP1-204ENST00000424207 CCDC9Q9Y3X0 531 aaKnown RBP23■■□□□ 1.27
EFEMP1-204ENST00000424207 GLI3P10071 1580 aa23■■□□□ 1.27
EFEMP1-204ENST00000424207 EXOC5O00471 708 aa22.99■■□□□ 1.27
EFEMP1-204ENST00000424207 ZNF772Q68DY9 489 aaPredicted RBP22.99■■□□□ 1.27
EFEMP1-204ENST00000424207 MCM10Q7L590 875 aa22.99■■□□□ 1.27
EFEMP1-204ENST00000424207 DCAF5Q96JK2 942 aa22.99■■□□□ 1.27
EFEMP1-204ENST00000424207 CFAP44Q96MT7 982 aa22.99■■□□□ 1.27
EFEMP1-204ENST00000424207 THSD7AQ9UPZ6 1657 aa22.99■■□□□ 1.27
EFEMP1-204ENST00000424207 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
EFEMP1-204ENST00000424207 RNMTO43148 476 aaKnown RBP22.98■■□□□ 1.27
EFEMP1-204ENST00000424207 GNAI1P63096 354 aa22.98■■□□□ 1.27
EFEMP1-204ENST00000424207 DCTN1Q14203 1278 aa22.98■■□□□ 1.27
EFEMP1-204ENST00000424207 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
EFEMP1-204ENST00000424207 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
EFEMP1-204ENST00000424207 CHL1O00533 1208 aa22.96■■□□□ 1.27
EFEMP1-204ENST00000424207 QTRT2Q9H974 415 aaKnown RBP22.96■■□□□ 1.27
EFEMP1-204ENST00000424207 KDM6AO15550 1401 aaPredicted RBP22.96■■□□□ 1.27
EFEMP1-204ENST00000424207 MRC1P22897 1456 aa22.95■■□□□ 1.26
EFEMP1-204ENST00000424207 LGR6Q9HBX8 967 aa22.95■■□□□ 1.26
EFEMP1-204ENST00000424207 DDB1Q16531 1140 aa22.94■■□□□ 1.26
EFEMP1-204ENST00000424207 MPRIPQ6WCQ1 1025 aa22.94■■□□□ 1.26
EFEMP1-204ENST00000424207 SIPA1L3O60292 1781 aaPredicted RBP22.94■■□□□ 1.26
EFEMP1-204ENST00000424207 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
EFEMP1-204ENST00000424207 FAM98CQ17RN3 349 aaKnown RBP22.93■■□□□ 1.26
EFEMP1-204ENST00000424207 FANCIQ9NVI1 1328 aa22.92■■□□□ 1.26
EFEMP1-204ENST00000424207 ERVV-2B6SEH9 535 aa22.92■■□□□ 1.26
EFEMP1-204ENST00000424207 CT47B1P0C2W7 299 aaPredicted RBP22.9■■□□□ 1.26
EFEMP1-204ENST00000424207 TEFQ10587 303 aa22.9■■□□□ 1.26
EFEMP1-204ENST00000424207 DDX54Q8TDD1 881 aaKnown RBP22.9■■□□□ 1.26
EFEMP1-204ENST00000424207 SLC52A2Q9HAB3 445 aa22.89■■□□□ 1.25
EFEMP1-204ENST00000424207 MBIPQ9NS73 344 aa22.89■■□□□ 1.25
EFEMP1-204ENST00000424207 RBM6P78332 1123 aaKnown RBP22.88■■□□□ 1.25
EFEMP1-204ENST00000424207 BCL9O00512 1426 aa22.87■■□□□ 1.25
EFEMP1-204ENST00000424207 MARCH10Q8NA82 808 aaPredicted RBP22.86■■□□□ 1.25
EFEMP1-204ENST00000424207 TSR2Q969E8 191 aaKnown RBP22.86■■□□□ 1.25
EFEMP1-204ENST00000424207 KDM3BQ7LBC6 1761 aa22.86■■□□□ 1.25
EFEMP1-204ENST00000424207 TSPYL4Q9UJ04 414 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms