RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 RGPD4Q7Z3J3 1758 aa15.85■□□□□ 0.13
NCDN-204ENST00000423723 MEGF6O75095 1541 aa15.84■□□□□ 0.13
NCDN-204ENST00000423723 MAP2P11137 1827 aaKnown RBP15.84■□□□□ 0.13
NCDN-204ENST00000423723 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
NCDN-204ENST00000423723 RREB1Q92766 1687 aa15.83■□□□□ 0.13
NCDN-204ENST00000423723 EYA1Q99502 592 aa15.83■□□□□ 0.12
NCDN-204ENST00000423723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.83■□□□□ 0.12
NCDN-204ENST00000423723 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
NCDN-204ENST00000423723 RAPGEF4Q8WZA2 1011 aa15.82■□□□□ 0.12
NCDN-204ENST00000423723 EIF4A2Q14240 407 aaKnown RBP15.81■□□□□ 0.12
NCDN-204ENST00000423723 TATP17735 454 aaPredicted RBP15.8■□□□□ 0.12
NCDN-204ENST00000423723 MORC1Q86VD1 984 aa15.8■□□□□ 0.12
NCDN-204ENST00000423723 USHBP1Q8N6Y0 703 aa15.8■□□□□ 0.12
NCDN-204ENST00000423723 DDX54Q8TDD1 881 aaKnown RBP15.8■□□□□ 0.12
NCDN-204ENST00000423723 NHSQ6T4R5 1651 aa15.79■□□□□ 0.12
NCDN-204ENST00000423723 IGSF1Q8N6C5 1336 aa15.79■□□□□ 0.12
NCDN-204ENST00000423723 R3HDM1Q15032 1099 aaKnown RBP15.79■□□□□ 0.12
NCDN-204ENST00000423723 NKX1-1Q15270 411 aaPredicted RBP15.79■□□□□ 0.12
NCDN-204ENST00000423723 TXNRD1Q16881 649 aa15.79■□□□□ 0.12
NCDN-204ENST00000423723 NBPF14Q5TI25 921 aa15.79■□□□□ 0.12
NCDN-204ENST00000423723 NUP188Q5SRE5 1749 aa15.78■□□□□ 0.12
NCDN-204ENST00000423723 PPM1GO15355 546 aaPredicted RBP15.78■□□□□ 0.12
NCDN-204ENST00000423723 CYP27B1O15528 508 aa15.78■□□□□ 0.12
NCDN-204ENST00000423723 SHANK3Q9BYB0 1731 aa15.77■□□□□ 0.12
NCDN-204ENST00000423723 PSDA5PKW4 1024 aaPredicted RBP15.77■□□□□ 0.12
NCDN-204ENST00000423723 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
NCDN-204ENST00000423723 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.12
NCDN-204ENST00000423723 PCDH11XQ9BZA7 1347 aa15.76■□□□□ 0.11
NCDN-204ENST00000423723 PCDH11YQ9BZA8 1340 aa15.76■□□□□ 0.11
NCDN-204ENST00000423723 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
NCDN-204ENST00000423723 IL13P35225 146 aa15.75■□□□□ 0.11
NCDN-204ENST00000423723 SLC27A3Q5K4L6 730 aa15.74■□□□□ 0.11
NCDN-204ENST00000423723 ANO8Q9HCE9 1232 aaPredicted RBP15.74■□□□□ 0.11
NCDN-204ENST00000423723 KDRP35968 1356 aa15.74■□□□□ 0.11
NCDN-204ENST00000423723 LRRC4BQ9NT99 713 aa15.73■□□□□ 0.11
NCDN-204ENST00000423723 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
NCDN-204ENST00000423723 KAT6BQ8WYB5 2073 aa15.72■□□□□ 0.11
NCDN-204ENST00000423723 LRP5O75197 1615 aa15.72■□□□□ 0.11
NCDN-204ENST00000423723 PKD1L3Q7Z443 1732 aa15.72■□□□□ 0.11
NCDN-204ENST00000423723 MTHFSP49914 203 aa15.72■□□□□ 0.11
NCDN-204ENST00000423723 SLC15A2Q16348 729 aa15.72■□□□□ 0.11
NCDN-204ENST00000423723 BTAF1O14981 1849 aa15.72■□□□□ 0.11
NCDN-204ENST00000423723 YTHDC1Q96MU7 727 aaKnown RBP15.71■□□□□ 0.11
NCDN-204ENST00000423723 PHKG2P15735 406 aa15.7■□□□□ 0.1
NCDN-204ENST00000423723 IFNL2Q8IZJ0 200 aa15.7■□□□□ 0.1
NCDN-204ENST00000423723 AMOTQ4VCS5 1084 aa15.69■□□□□ 0.1
NCDN-204ENST00000423723 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
NCDN-204ENST00000423723 PAPPAQ13219 1627 aa15.68■□□□□ 0.1
NCDN-204ENST00000423723 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
NCDN-204ENST00000423723 STK32BQ9NY57 414 aa15.67■□□□□ 0.1
NCDN-204ENST00000423723 HMGB2P26583 209 aaKnown RBP15.66■□□□□ 0.1
NCDN-204ENST00000423723 PLEKHO1Q53GL0 409 aaPredicted RBP15.66■□□□□ 0.1
NCDN-204ENST00000423723 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
NCDN-204ENST00000423723 PIGBQ92521 554 aa15.66■□□□□ 0.1
NCDN-204ENST00000423723 SYTL4Q96C24 671 aaPredicted RBP15.66■□□□□ 0.1
NCDN-204ENST00000423723 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
NCDN-204ENST00000423723 LY75O60449 1722 aa15.65■□□□□ 0.1
NCDN-204ENST00000423723 DOT1LQ8TEK3 1739 aa15.65■□□□□ 0.1
NCDN-204ENST00000423723 ERVV-2B6SEH9 535 aa15.65■□□□□ 0.1
NCDN-204ENST00000423723 SULT6B1Q6IMI4 303 aa15.65■□□□□ 0.1
NCDN-204ENST00000423723 PDGFDQ9GZP0 370 aaPredicted RBP15.65■□□□□ 0.1
NCDN-204ENST00000423723 HSP90AB1P08238 724 aaKnown RBP15.64■□□□□ 0.09
NCDN-204ENST00000423723 SMARCC1Q92922 1105 aaPredicted RBP15.64■□□□□ 0.09
NCDN-204ENST00000423723 DCAF5Q96JK2 942 aa15.64■□□□□ 0.09
NCDN-204ENST00000423723 SPON1Q9HCB6 807 aa15.64■□□□□ 0.09
NCDN-204ENST00000423723 CASZ1Q86V15 1759 aa15.64■□□□□ 0.09
NCDN-204ENST00000423723 DIAPH1O60610 1272 aaKnown RBP15.63■□□□□ 0.09
NCDN-204ENST00000423723 ZNF827Q17R98 1081 aa15.63■□□□□ 0.09
NCDN-204ENST00000423723 MPRIPQ6WCQ1 1025 aa15.63■□□□□ 0.09
NCDN-204ENST00000423723 SGIP1Q9BQI5 828 aa15.63■□□□□ 0.09
NCDN-204ENST00000423723 COL3A1P02461 1466 aaPredicted RBP15.63■□□□□ 0.09
NCDN-204ENST00000423723 PTGER2P43116 358 aa15.62■□□□□ 0.09
NCDN-204ENST00000423723 DDX10Q13206 875 aaKnown RBP15.62■□□□□ 0.09
NCDN-204ENST00000423723 SLC16A10Q8TF71 515 aa15.62■□□□□ 0.09
NCDN-204ENST00000423723 TOGARAM1Q9Y4F4 1720 aa15.62■□□□□ 0.09
NCDN-204ENST00000423723 CCNL1Q9UK58 526 aaPredicted RBP15.61■□□□□ 0.09
NCDN-204ENST00000423723 PALLDQ8WX93 1383 aa15.61■□□□□ 0.09
NCDN-204ENST00000423723 ITGB4P16144 1822 aa15.6■□□□□ 0.09
NCDN-204ENST00000423723 MTFR1LQ9H019 292 aa15.6■□□□□ 0.09
NCDN-204ENST00000423723 PPP2R1AP30153 589 aa15.59■□□□□ 0.09
NCDN-204ENST00000423723 KCNQ4P56696 695 aa15.59■□□□□ 0.09
NCDN-204ENST00000423723 ZNF530Q6P9A1 599 aaPredicted RBP15.59■□□□□ 0.09
NCDN-204ENST00000423723 ATG3Q9NT62 314 aa15.59■□□□□ 0.09
NCDN-204ENST00000423723 TMOD3Q9NYL9 352 aa15.59■□□□□ 0.09
NCDN-204ENST00000423723 PNPLA7Q6ZV29 1317 aa15.59■□□□□ 0.09
NCDN-204ENST00000423723 KDM6AO15550 1401 aaPredicted RBP15.59■□□□□ 0.09
NCDN-204ENST00000423723 CCER2I3L3R5 266 aa15.58■□□□□ 0.08
NCDN-204ENST00000423723 AKAP4Q5JQC9 854 aa15.58■□□□□ 0.08
NCDN-204ENST00000423723 ASAP1Q9ULH1 1129 aa15.58■□□□□ 0.08
NCDN-204ENST00000423723 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
NCDN-204ENST00000423723 LOC102724428A0A0B4J2F2 783 aa15.57■□□□□ 0.08
NCDN-204ENST00000423723 SIK1P57059 783 aa15.57■□□□□ 0.08
NCDN-204ENST00000423723 ZBTB7AO95365 584 aa15.55■□□□□ 0.08
NCDN-204ENST00000423723 HMOX1P09601 288 aa15.55■□□□□ 0.08
NCDN-204ENST00000423723 MTHFSDQ2M296 383 aaKnown RBP15.55■□□□□ 0.08
NCDN-204ENST00000423723 C1orf141Q5JVX7 400 aa15.55■□□□□ 0.08
NCDN-204ENST00000423723 TFCP2L1Q9NZI6 479 aa15.55■□□□□ 0.08
NCDN-204ENST00000423723 COL24A1Q17RW2 1714 aa15.54■□□□□ 0.08
NCDN-204ENST00000423723 ANP32CO43423 234 aa15.54■□□□□ 0.08
NCDN-204ENST00000423723 FLAD1Q8NFF5 587 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms